RNA–Protein interactions for RNA: ENST00000512713.5

YIPF3-216, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 306 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-216ENST00000512713 PCDH11YQ9BZA8 1340 aa12.62□□□□□ -0.39
YIPF3-216ENST00000512713 PDGFDQ9GZP0 370 aaPredicted RBP12.62□□□□□ -0.39
YIPF3-216ENST00000512713 HMGB2P26583 209 aaKnown RBP12.61□□□□□ -0.39
YIPF3-216ENST00000512713 MTFR1LQ9H019 292 aa12.61□□□□□ -0.39
YIPF3-216ENST00000512713 LRRC4BQ9NT99 713 aa12.61□□□□□ -0.39
YIPF3-216ENST00000512713 POLKQ9UBT6 870 aa12.61□□□□□ -0.39
YIPF3-216ENST00000512713 SPG7Q9UQ90 795 aa12.61□□□□□ -0.39
YIPF3-216ENST00000512713 ATF5Q9Y2D1 282 aaPredicted RBP12.61□□□□□ -0.39
YIPF3-216ENST00000512713 TFCP2L1Q9NZI6 479 aa12.6□□□□□ -0.39
YIPF3-216ENST00000512713 MEGF6O75095 1541 aa12.6□□□□□ -0.39
YIPF3-216ENST00000512713 MORC1Q86VD1 984 aa12.59□□□□□ -0.39
YIPF3-216ENST00000512713 CCNL1Q9UK58 526 aaPredicted RBP12.59□□□□□ -0.39
YIPF3-216ENST00000512713 KNSTRNQ9Y448 316 aa12.59□□□□□ -0.39
YIPF3-216ENST00000512713 RREB1Q92766 1687 aa12.58□□□□□ -0.4
YIPF3-216ENST00000512713 AKT1S1Q96B36 256 aa12.58□□□□□ -0.4
YIPF3-216ENST00000512713 EYA1Q99502 592 aa12.58□□□□□ -0.4
YIPF3-216ENST00000512713 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.58□□□□□ -0.4
YIPF3-216ENST00000512713 RGPD5Q99666 1765 aa12.58□□□□□ -0.4
YIPF3-216ENST00000512713 NUP188Q5SRE5 1749 aa12.57□□□□□ -0.4
YIPF3-216ENST00000512713 LTN1O94822 1766 aa12.57□□□□□ -0.4
YIPF3-216ENST00000512713 CYP27B1O15528 508 aa12.57□□□□□ -0.4
YIPF3-216ENST00000512713 PTGER2P43116 358 aa12.57□□□□□ -0.4
YIPF3-216ENST00000512713 KCNQ4P56696 695 aa12.57□□□□□ -0.4
YIPF3-216ENST00000512713 ZNF827Q17R98 1081 aa12.57□□□□□ -0.4
YIPF3-216ENST00000512713 MPRIPQ6WCQ1 1025 aa12.57□□□□□ -0.4
YIPF3-216ENST00000512713 NSD2O96028 1365 aa12.56□□□□□ -0.4
YIPF3-216ENST00000512713 EIF4A2Q14240 407 aaKnown RBP12.56□□□□□ -0.4
YIPF3-216ENST00000512713 SLC16A10Q8TF71 515 aa12.56□□□□□ -0.4
YIPF3-216ENST00000512713 SMARCC1Q92922 1105 aaPredicted RBP12.56□□□□□ -0.4
YIPF3-216ENST00000512713 RGPD3A6NKT7 1758 aaPredicted RBP12.56□□□□□ -0.4
YIPF3-216ENST00000512713 RGPD4Q7Z3J3 1758 aa12.56□□□□□ -0.4
YIPF3-216ENST00000512713 POLD1P28340 1107 aa12.55□□□□□ -0.4
YIPF3-216ENST00000512713 ARXQ96QS3 562 aa12.55□□□□□ -0.4
YIPF3-216ENST00000512713 WNK3Q9BYP7 1800 aa12.55□□□□□ -0.4
YIPF3-216ENST00000512713 MSH5O43196 834 aa12.54□□□□□ -0.4
YIPF3-216ENST00000512713 NKX1-1Q15270 411 aaPredicted RBP12.54□□□□□ -0.4
YIPF3-216ENST00000512713 IFNL2Q8IZJ0 200 aa12.54□□□□□ -0.4
YIPF3-216ENST00000512713 NHSQ6T4R5 1651 aa12.54□□□□□ -0.4
YIPF3-216ENST00000512713 FAM208AQ9UK61 1670 aaKnown RBP12.54□□□□□ -0.4
YIPF3-216ENST00000512713 FHDC1Q9C0D6 1143 aaPredicted RBP12.53□□□□□ -0.4
YIPF3-216ENST00000512713 PIGBQ92521 554 aa12.52□□□□□ -0.41
YIPF3-216ENST00000512713 SGIP1Q9BQI5 828 aa12.52□□□□□ -0.41
YIPF3-216ENST00000512713 SYT17Q9BSW7 474 aa12.52□□□□□ -0.41
YIPF3-216ENST00000512713 TMOD3Q9NYL9 352 aa12.52□□□□□ -0.41
YIPF3-216ENST00000512713 KIF7Q2M1P5 1343 aa12.52□□□□□ -0.41
YIPF3-216ENST00000512713 PNPLA7Q6ZV29 1317 aa12.52□□□□□ -0.41
YIPF3-216ENST00000512713 PALLDQ8WX93 1383 aa12.52□□□□□ -0.41
YIPF3-216ENST00000512713 PHKG2P15735 406 aa12.51□□□□□ -0.41
YIPF3-216ENST00000512713 AMOTQ4VCS5 1084 aa12.51□□□□□ -0.41
YIPF3-216ENST00000512713 PLEKHO1Q53GL0 409 aaPredicted RBP12.51□□□□□ -0.41
YIPF3-216ENST00000512713 FLAD1Q8NFF5 587 aa12.51□□□□□ -0.41
YIPF3-216ENST00000512713 IGSF1Q8N6C5 1336 aa12.51□□□□□ -0.41
YIPF3-216ENST00000512713 NCAPD2Q15021 1401 aa12.51□□□□□ -0.41
YIPF3-216ENST00000512713 SBF2Q86WG5 1849 aa12.51□□□□□ -0.41
YIPF3-216ENST00000512713 HSP90AB1P08238 724 aaKnown RBP12.5□□□□□ -0.41
YIPF3-216ENST00000512713 YY1P25490 414 aa12.5□□□□□ -0.41
YIPF3-216ENST00000512713 PLEKHG2Q9H7P9 1386 aa12.5□□□□□ -0.41
YIPF3-216ENST00000512713 MYOM1P52179 1685 aa12.49□□□□□ -0.41
YIPF3-216ENST00000512713 AMER1Q5JTC6 1135 aaPredicted RBP12.49□□□□□ -0.41
YIPF3-216ENST00000512713 DCAF5Q96JK2 942 aa12.49□□□□□ -0.41
YIPF3-216ENST00000512713 AK7Q96M32 723 aa12.49□□□□□ -0.41
YIPF3-216ENST00000512713 LOC102724428A0A0B4J2F2 783 aa12.48□□□□□ -0.41
YIPF3-216ENST00000512713 ERVV-2B6SEH9 535 aa12.48□□□□□ -0.41
YIPF3-216ENST00000512713 SIK1P57059 783 aa12.48□□□□□ -0.41
YIPF3-216ENST00000512713 C1orf141Q5JVX7 400 aa12.48□□□□□ -0.41
YIPF3-216ENST00000512713 COL23A1Q86Y22 540 aaPredicted RBP12.48□□□□□ -0.41
YIPF3-216ENST00000512713 KLHL34Q8N239 644 aa12.48□□□□□ -0.41
YIPF3-216ENST00000512713 SULT6B1Q6IMI4 303 aa12.47□□□□□ -0.41
YIPF3-216ENST00000512713 ZNF530Q6P9A1 599 aaPredicted RBP12.47□□□□□ -0.41
YIPF3-216ENST00000512713 ASAP1Q9ULH1 1129 aa12.47□□□□□ -0.41
YIPF3-216ENST00000512713 KIF20BQ96Q89 1820 aa12.46□□□□□ -0.41
YIPF3-216ENST00000512713 MAP3K5Q99683 1374 aa12.46□□□□□ -0.41
YIPF3-216ENST00000512713 IL13P35225 146 aa12.46□□□□□ -0.41
YIPF3-216ENST00000512713 MTHFSP49914 203 aa12.46□□□□□ -0.41
YIPF3-216ENST00000512713 CABP4P57796 275 aa12.46□□□□□ -0.41
YIPF3-216ENST00000512713 BTAF1O14981 1849 aa12.46□□□□□ -0.42
YIPF3-216ENST00000512713 PAPPAQ13219 1627 aa12.45□□□□□ -0.42
YIPF3-216ENST00000512713 PER1O15534 1290 aaPredicted RBP12.45□□□□□ -0.42
YIPF3-216ENST00000512713 ATP6V1AP38606 617 aa12.45□□□□□ -0.42
YIPF3-216ENST00000512713 GPR162Q16538 588 aa12.45□□□□□ -0.42
YIPF3-216ENST00000512713 CC2D1BQ5T0F9 858 aaKnown RBP12.45□□□□□ -0.42
YIPF3-216ENST00000512713 AEBP1Q8IUX7 1158 aa12.45□□□□□ -0.42
YIPF3-216ENST00000512713 ATG3Q9NT62 314 aa12.45□□□□□ -0.42
YIPF3-216ENST00000512713 CASZ1Q86V15 1759 aa12.45□□□□□ -0.42
YIPF3-216ENST00000512713 PHF14O94880 888 aa12.44□□□□□ -0.42
YIPF3-216ENST00000512713 MSL1Q68DK7 614 aa12.44□□□□□ -0.42
YIPF3-216ENST00000512713 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.43□□□□□ -0.42
YIPF3-216ENST00000512713 SSFA2P28290 1259 aa12.43□□□□□ -0.42
YIPF3-216ENST00000512713 RBM42Q9BTD8 480 aaKnown RBP12.43□□□□□ -0.42
YIPF3-216ENST00000512713 GNPATO15228 680 aa12.42□□□□□ -0.42
YIPF3-216ENST00000512713 DIAPH1O60610 1272 aaKnown RBP12.42□□□□□ -0.42
YIPF3-216ENST00000512713 CNGB1Q14028 1251 aaPredicted RBP12.42□□□□□ -0.42
YIPF3-216ENST00000512713 PELP1Q8IZL8 1130 aaKnown RBP12.42□□□□□ -0.42
YIPF3-216ENST00000512713 LINC00116Q8NCU8 138 aa12.42□□□□□ -0.42
YIPF3-216ENST00000512713 ITPK1Q13572 414 aa12.41□□□□□ -0.42
YIPF3-216ENST00000512713 DOT1LQ8TEK3 1739 aa12.41□□□□□ -0.42
YIPF3-216ENST00000512713 HMOX1P09601 288 aa12.4□□□□□ -0.42
YIPF3-216ENST00000512713 AKAP4Q5JQC9 854 aa12.4□□□□□ -0.42
YIPF3-216ENST00000512713 NFATC2IPQ8NCF5 419 aa12.4□□□□□ -0.42
YIPF3-216ENST00000512713 RTCBQ9Y3I0 505 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms