RNA–Protein interactions for RNA: ENST00000512694.5

DDR1-268, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-268ENST00000512694 PNPLA7Q6ZV29 1317 aa22.43■■□□□ 1.18
DDR1-268ENST00000512694 HOXC9P31274 260 aa22.43■■□□□ 1.18
DDR1-268ENST00000512694 AMPHP49418 695 aa22.43■■□□□ 1.18
DDR1-268ENST00000512694 PRIM1P49642 420 aaKnown RBP22.43■■□□□ 1.18
DDR1-268ENST00000512694 GPR162Q16538 588 aa22.43■■□□□ 1.18
DDR1-268ENST00000512694 PELP1Q8IZL8 1130 aaKnown RBP22.43■■□□□ 1.18
DDR1-268ENST00000512694 MAP3K5Q99683 1374 aa22.42■■□□□ 1.18
DDR1-268ENST00000512694 PUS7Q96PZ0 661 aaKnown RBP22.42■■□□□ 1.18
DDR1-268ENST00000512694 TFCP2L1Q9NZI6 479 aa22.42■■□□□ 1.18
DDR1-268ENST00000512694 KIF20BQ96Q89 1820 aa22.42■■□□□ 1.18
DDR1-268ENST00000512694 SLC27A3Q5K4L6 730 aa22.41■■□□□ 1.18
DDR1-268ENST00000512694 TIMELESSQ9UNS1 1208 aa22.41■■□□□ 1.18
DDR1-268ENST00000512694 NSD2O96028 1365 aa22.4■■□□□ 1.18
DDR1-268ENST00000512694 ANKRD36BQ8N2N9 1353 aa22.4■■□□□ 1.18
DDR1-268ENST00000512694 ST20-MTHFSA0A0A6YYL1 179 aa22.4■■□□□ 1.18
DDR1-268ENST00000512694 TESK2Q96S53 571 aa22.4■■□□□ 1.18
DDR1-268ENST00000512694 POLD1P28340 1107 aa22.39■■□□□ 1.17
DDR1-268ENST00000512694 USHBP1Q8N6Y0 703 aa22.39■■□□□ 1.17
DDR1-268ENST00000512694 C5P01031 1676 aa22.39■■□□□ 1.17
DDR1-268ENST00000512694 RRS1Q15050 365 aaKnown RBP22.38■■□□□ 1.17
DDR1-268ENST00000512694 ZCRB1Q8TBF4 217 aaKnown RBP22.38■■□□□ 1.17
DDR1-268ENST00000512694 TAF1LQ8IZX4 1826 aa22.37■■□□□ 1.17
DDR1-268ENST00000512694 MSH5O43196 834 aa22.37■■□□□ 1.17
DDR1-268ENST00000512694 PCGF6Q9BYE7 350 aa22.37■■□□□ 1.17
DDR1-268ENST00000512694 NLGN2Q8NFZ4 835 aa22.36■■□□□ 1.17
DDR1-268ENST00000512694 SLC16A10Q8TF71 515 aa22.36■■□□□ 1.17
DDR1-268ENST00000512694 CCNL1Q9UK58 526 aaPredicted RBP22.36■■□□□ 1.17
DDR1-268ENST00000512694 SENP3-EIF4A1A0A087X0R7 540 aa22.35■■□□□ 1.17
DDR1-268ENST00000512694 GGNBP2Q9H3C7 697 aa22.35■■□□□ 1.17
DDR1-268ENST00000512694 ITGB4P16144 1822 aa22.35■■□□□ 1.17
DDR1-268ENST00000512694 USP47Q96K76 1375 aa22.35■■□□□ 1.17
DDR1-268ENST00000512694 RTL1A6NKG5 1358 aa22.34■■□□□ 1.17
DDR1-268ENST00000512694 NBPF6Q5VWK0 638 aa22.33■■□□□ 1.17
DDR1-268ENST00000512694 NBPF4Q96M43 638 aa22.33■■□□□ 1.17
DDR1-268ENST00000512694 SMG6Q86US8 1419 aaKnown RBP22.32■■□□□ 1.16
DDR1-268ENST00000512694 MSL1Q68DK7 614 aa22.32■■□□□ 1.16
DDR1-268ENST00000512694 TOGARAM1Q9Y4F4 1720 aa22.31■■□□□ 1.16
DDR1-268ENST00000512694 TMF1P82094 1093 aa22.3■■□□□ 1.16
DDR1-268ENST00000512694 RAPGEF4Q8WZA2 1011 aa22.3■■□□□ 1.16
DDR1-268ENST00000512694 C1QTNF8P60827 252 aa22.29■■□□□ 1.16
DDR1-268ENST00000512694 FYB1O15117 783 aa22.28■■□□□ 1.16
DDR1-268ENST00000512694 CDCA8Q53HL2 280 aa22.28■■□□□ 1.16
DDR1-268ENST00000512694 COL23A1Q86Y22 540 aaPredicted RBP22.28■■□□□ 1.16
DDR1-268ENST00000512694 TATP17735 454 aaPredicted RBP22.27■■□□□ 1.16
DDR1-268ENST00000512694 PKD1L3Q7Z443 1732 aa22.26■■□□□ 1.15
DDR1-268ENST00000512694 YBX3P16989 372 aaKnown RBP eCLIP22.25■■□□□ 1.15
DDR1-268ENST00000512694 HSP90AB2PQ58FF8 381 aa22.25■■□□□ 1.15
DDR1-268ENST00000512694 C4BP0C0L5 1744 aa22.25■■□□□ 1.15
DDR1-268ENST00000512694 UBR3Q6ZT12 1888 aa22.24■■□□□ 1.15
DDR1-268ENST00000512694 GIGYF1O75420 1035 aaPredicted RBP22.24■■□□□ 1.15
DDR1-268ENST00000512694 CGNL1Q0VF96 1302 aa22.24■■□□□ 1.15
DDR1-268ENST00000512694 PCDH11XQ9BZA7 1347 aa22.24■■□□□ 1.15
DDR1-268ENST00000512694 PCDH11YQ9BZA8 1340 aa22.24■■□□□ 1.15
DDR1-268ENST00000512694 MAP2P11137 1827 aaKnown RBP22.24■■□□□ 1.15
DDR1-268ENST00000512694 CCER1Q8TC90 406 aaPredicted RBP22.23■■□□□ 1.15
DDR1-268ENST00000512694 INSRP06213 1382 aa22.23■■□□□ 1.15
DDR1-268ENST00000512694 FLT4P35916 1363 aa22.23■■□□□ 1.15
DDR1-268ENST00000512694 PALLDQ8WX93 1383 aa22.23■■□□□ 1.15
DDR1-268ENST00000512694 MPRIPQ6WCQ1 1025 aa22.22■■□□□ 1.15
DDR1-268ENST00000512694 ANKRD26Q9UPS8 1709 aa22.2■■□□□ 1.14
DDR1-268ENST00000512694 CYP27B1O15528 508 aa22.19■■□□□ 1.14
DDR1-268ENST00000512694 EMILIN1Q9Y6C2 1016 aa22.19■■□□□ 1.14
DDR1-268ENST00000512694 SMIM5Q71RC9 77 aa22.18■■□□□ 1.14
DDR1-268ENST00000512694 CEP350Q5VT06 3117 aa22.17■■□□□ 1.14
DDR1-268ENST00000512694 NSD3Q9BZ95 1437 aa22.17■■□□□ 1.14
DDR1-268ENST00000512694 PPM1GO15355 546 aaPredicted RBP22.17■■□□□ 1.14
DDR1-268ENST00000512694 PHF14O94880 888 aa22.17■■□□□ 1.14
DDR1-268ENST00000512694 WWC3Q9ULE0 1092 aa22.17■■□□□ 1.14
DDR1-268ENST00000512694 GRIN3BO60391 1043 aa22.16■■□□□ 1.14
DDR1-268ENST00000512694 AMIGO3Q86WK7 504 aa22.15■■□□□ 1.14
DDR1-268ENST00000512694 AK7Q96M32 723 aa22.15■■□□□ 1.14
DDR1-268ENST00000512694 CARD14Q9BXL6 1004 aa22.14■■□□□ 1.13
DDR1-268ENST00000512694 ATP10DQ9P241 1426 aa22.14■■□□□ 1.13
DDR1-268ENST00000512694 KIF24Q5T7B8 1368 aa22.12■■□□□ 1.13
DDR1-268ENST00000512694 FLAD1Q8NFF5 587 aa22.12■■□□□ 1.13
DDR1-268ENST00000512694 PIGBQ92521 554 aa22.11■■□□□ 1.13
DDR1-268ENST00000512694 SMARCC1Q92922 1105 aaPredicted RBP22.11■■□□□ 1.13
DDR1-268ENST00000512694 CD2APQ9Y5K6 639 aa22.1■■□□□ 1.13
DDR1-268ENST00000512694 ZNF526Q8TF50 670 aaPredicted RBP22.09■■□□□ 1.13
DDR1-268ENST00000512694 NCAPD2Q15021 1401 aa22.08■■□□□ 1.13
DDR1-268ENST00000512694 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.08■■□□□ 1.13
DDR1-268ENST00000512694 SPG7Q9UQ90 795 aa22.08■■□□□ 1.13
DDR1-268ENST00000512694 EIF4G2P78344 907 aaKnown RBP eCLIP22.07■■□□□ 1.12
DDR1-268ENST00000512694 LINC00116Q8NCU8 138 aa22.07■■□□□ 1.12
DDR1-268ENST00000512694 N4BP2Q86UW6 1770 aaPredicted RBP22.07■■□□□ 1.12
DDR1-268ENST00000512694 IGSF1Q8N6C5 1336 aa22.06■■□□□ 1.12
DDR1-268ENST00000512694 POLR3GLQ9BT43 218 aa22.06■■□□□ 1.12
DDR1-268ENST00000512694 TMOD3Q9NYL9 352 aa22.06■■□□□ 1.12
DDR1-268ENST00000512694 LOC102724428A0A0B4J2F2 783 aa22.05■■□□□ 1.12
DDR1-268ENST00000512694 SIK1P57059 783 aa22.05■■□□□ 1.12
DDR1-268ENST00000512694 EYA1Q99502 592 aa22.05■■□□□ 1.12
DDR1-268ENST00000512694 ASAP1Q9ULH1 1129 aa22.05■■□□□ 1.12
DDR1-268ENST00000512694 GNPATO15228 680 aa22.04■■□□□ 1.12
DDR1-268ENST00000512694 HMGB2P26583 209 aaKnown RBP22.04■■□□□ 1.12
DDR1-268ENST00000512694 TNNT2P45379 298 aaPredicted RBP22.04■■□□□ 1.12
DDR1-268ENST00000512694 GPBP1L1Q9HC44 474 aaPredicted RBP22.04■■□□□ 1.12
DDR1-268ENST00000512694 NKX1-1Q15270 411 aaPredicted RBP22.03■■□□□ 1.12
DDR1-268ENST00000512694 ADCY9O60503 1353 aa22.02■■□□□ 1.12
DDR1-268ENST00000512694 SSFA2P28290 1259 aa22.02■■□□□ 1.12
DDR1-268ENST00000512694 ITPK1Q13572 414 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms