RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 LRRC59Q96AG4 307 aaKnown RBP31.35■■■□□ 2.61
SPOCK3-221ENST00000512648 VAMP4O75379 141 aa31.34■■■□□ 2.61
SPOCK3-221ENST00000512648 PLEKHO1Q53GL0 409 aaPredicted RBP31.34■■■□□ 2.61
SPOCK3-221ENST00000512648 MCM10Q7L590 875 aa31.34■■■□□ 2.61
SPOCK3-221ENST00000512648 USHBP1Q8N6Y0 703 aa31.34■■■□□ 2.61
SPOCK3-221ENST00000512648 MAP3K5Q99683 1374 aa31.34■■■□□ 2.61
SPOCK3-221ENST00000512648 HAP1P54257 671 aaPredicted RBP31.33■■■□□ 2.61
SPOCK3-221ENST00000512648 B4GALNT3Q6L9W6 998 aa31.33■■■□□ 2.61
SPOCK3-221ENST00000512648 CCDC136Q96JN2 1154 aa31.33■■■□□ 2.61
SPOCK3-221ENST00000512648 KIAA0232Q92628 1395 aa31.32■■■□□ 2.61
SPOCK3-221ENST00000512648 MS4A1P11836 297 aa31.32■■■□□ 2.6
SPOCK3-221ENST00000512648 PLEKHG5O94827 1062 aa31.31■■■□□ 2.6
SPOCK3-221ENST00000512648 SSH1Q8WYL5 1049 aa31.31■■■□□ 2.6
SPOCK3-221ENST00000512648 AAMPQ13685 434 aa31.3■■■□□ 2.6
SPOCK3-221ENST00000512648 AHDC1Q5TGY3 1603 aaPredicted RBP31.29■■■□□ 2.6
SPOCK3-221ENST00000512648 AKAP4Q5JQC9 854 aa31.27■■■□□ 2.6
SPOCK3-221ENST00000512648 SMC4Q9NTJ3 1288 aa31.27■■■□□ 2.6
SPOCK3-221ENST00000512648 CEMIPQ8WUJ3 1361 aa31.27■■■□□ 2.6
SPOCK3-221ENST00000512648 CANXP27824 592 aaKnown RBP31.27■■■□□ 2.6
SPOCK3-221ENST00000512648 ZKSCAN2Q63HK3 967 aa31.27■■■□□ 2.6
SPOCK3-221ENST00000512648 IL17REQ8NFR9 667 aa31.27■■■□□ 2.6
SPOCK3-221ENST00000512648 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.27■■■□□ 2.6
SPOCK3-221ENST00000512648 LRRC37A3O60309 1634 aa31.26■■■□□ 2.59
SPOCK3-221ENST00000512648 TWISTNBQ3B726 338 aaPredicted RBP31.26■■■□□ 2.59
SPOCK3-221ENST00000512648 FAM208AQ9UK61 1670 aaKnown RBP31.25■■■□□ 2.59
SPOCK3-221ENST00000512648 KIF16BQ96L93 1317 aa31.25■■■□□ 2.59
SPOCK3-221ENST00000512648 IPO8O15397 1037 aaKnown RBP31.24■■■□□ 2.59
SPOCK3-221ENST00000512648 C8orf58Q8NAV2 365 aa31.24■■■□□ 2.59
SPOCK3-221ENST00000512648 FRAT1Q92837 279 aaPredicted RBP31.24■■■□□ 2.59
SPOCK3-221ENST00000512648 RGPD2P0DJD1 1756 aa31.24■■■□□ 2.59
SPOCK3-221ENST00000512648 TSPYL6Q8N831 410 aa31.23■■■□□ 2.59
SPOCK3-221ENST00000512648 PRDM11Q9NQV5 511 aa31.23■■■□□ 2.59
SPOCK3-221ENST00000512648 SOS1Q07889 1333 aaPredicted RBP31.23■■■□□ 2.59
SPOCK3-221ENST00000512648 OVOS2A0A0G2JMS6 1433 aa31.22■■■□□ 2.59
SPOCK3-221ENST00000512648 CHRNA2Q15822 529 aa31.22■■■□□ 2.59
SPOCK3-221ENST00000512648 ARHGAP45Q92619 1136 aa31.22■■■□□ 2.59
SPOCK3-221ENST00000512648 RGPD5Q99666 1765 aa31.22■■■□□ 2.59
SPOCK3-221ENST00000512648 TAF7Q15545 349 aaPredicted RBP31.21■■■□□ 2.59
SPOCK3-221ENST00000512648 BCL2L13Q9BXK5 485 aa31.21■■■□□ 2.59
SPOCK3-221ENST00000512648 NLRP2Q9NX02 1062 aa31.21■■■□□ 2.59
SPOCK3-221ENST00000512648 ROBO1Q9Y6N7 1651 aa31.21■■■□□ 2.59
SPOCK3-221ENST00000512648 ZNF530Q6P9A1 599 aaPredicted RBP31.19■■■□□ 2.58
SPOCK3-221ENST00000512648 ATF7IPQ6VMQ6 1270 aa31.19■■■□□ 2.58
SPOCK3-221ENST00000512648 MRPL50Q8N5N7 158 aaKnown RBP31.19■■■□□ 2.58
SPOCK3-221ENST00000512648 RAPGEF4Q8WZA2 1011 aa31.19■■■□□ 2.58
SPOCK3-221ENST00000512648 TSPYL4Q9UJ04 414 aa31.19■■■□□ 2.58
SPOCK3-221ENST00000512648 ABCA3Q99758 1704 aa31.19■■■□□ 2.58
SPOCK3-221ENST00000512648 CSB-PGBD3P0DP91 1061 aa31.18■■■□□ 2.58
SPOCK3-221ENST00000512648 WDR17Q8IZU2 1322 aa31.18■■■□□ 2.58
SPOCK3-221ENST00000512648 TATP17735 454 aaPredicted RBP31.17■■■□□ 2.58
SPOCK3-221ENST00000512648 DZIP1LQ8IYY4 767 aaKnown RBP31.17■■■□□ 2.58
SPOCK3-221ENST00000512648 TOM1O60784 492 aa31.16■■■□□ 2.58
SPOCK3-221ENST00000512648 PANK1Q8TE04 598 aa31.16■■■□□ 2.58
SPOCK3-221ENST00000512648 NOB1Q9ULX3 412 aaKnown RBP31.16■■■□□ 2.58
SPOCK3-221ENST00000512648 C1orf141Q5JVX7 400 aa31.15■■■□□ 2.58
SPOCK3-221ENST00000512648 COL22A1Q8NFW1 1626 aaPredicted RBP31.14■■■□□ 2.58
SPOCK3-221ENST00000512648 TRIM27P14373 513 aa31.14■■■□□ 2.57
SPOCK3-221ENST00000512648 SPG7Q9UQ90 795 aa31.14■■■□□ 2.57
SPOCK3-221ENST00000512648 COL5A2P05997 1499 aaPredicted RBP31.13■■■□□ 2.57
SPOCK3-221ENST00000512648 RLBP1P12271 317 aa31.13■■■□□ 2.57
SPOCK3-221ENST00000512648 COG6Q9Y2V7 657 aa31.12■■■□□ 2.57
SPOCK3-221ENST00000512648 ELL2O00472 640 aaPredicted RBP31.11■■■□□ 2.57
SPOCK3-221ENST00000512648 RNMTO43148 476 aaKnown RBP31.11■■■□□ 2.57
SPOCK3-221ENST00000512648 MVPQ14764 893 aaKnown RBP31.1■■■□□ 2.57
SPOCK3-221ENST00000512648 CARD10Q9BWT7 1032 aa31.1■■■□□ 2.57
SPOCK3-221ENST00000512648 LGR6Q9HBX8 967 aa31.1■■■□□ 2.57
SPOCK3-221ENST00000512648 FTSJ3Q8IY81 847 aaKnown RBP31.08■■■□□ 2.57
SPOCK3-221ENST00000512648 MIS18AQ9NYP9 233 aa31.08■■■□□ 2.57
SPOCK3-221ENST00000512648 ADAMTS7Q9UKP4 1686 aa31.08■■■□□ 2.57
SPOCK3-221ENST00000512648 CLUAP1Q96AJ1 413 aa31.08■■■□□ 2.57
SPOCK3-221ENST00000512648 MEGF6O75095 1541 aa31.07■■■□□ 2.56
SPOCK3-221ENST00000512648 TNNQ9UQP3 1299 aa31.07■■■□□ 2.56
SPOCK3-221ENST00000512648 CHMP4AQ9BY43 222 aa31.06■■■□□ 2.56
SPOCK3-221ENST00000512648 TEFQ10587 303 aa31.05■■■□□ 2.56
SPOCK3-221ENST00000512648 IFNL2Q8IZJ0 200 aa31.05■■■□□ 2.56
SPOCK3-221ENST00000512648 API5Q9BZZ5 524 aaKnown RBP31.05■■■□□ 2.56
SPOCK3-221ENST00000512648 DDX19BQ9UMR2 479 aa31.05■■■□□ 2.56
SPOCK3-221ENST00000512648 KDM2BQ8NHM5 1336 aa31.04■■■□□ 2.56
SPOCK3-221ENST00000512648 HOXB7P09629 217 aa31.04■■■□□ 2.56
SPOCK3-221ENST00000512648 KRT24Q2M2I5 525 aa31.04■■■□□ 2.56
SPOCK3-221ENST00000512648 MPRIPQ6WCQ1 1025 aa31.04■■■□□ 2.56
SPOCK3-221ENST00000512648 PHKG2P15735 406 aa31.03■■■□□ 2.56
SPOCK3-221ENST00000512648 TOM1L2Q6ZVM7 507 aa31.03■■■□□ 2.56
SPOCK3-221ENST00000512648 CENPQQ7L2Z9 268 aaPredicted RBP31.03■■■□□ 2.56
SPOCK3-221ENST00000512648 HSP90AB1P08238 724 aaKnown RBP31.02■■■□□ 2.56
SPOCK3-221ENST00000512648 CHMP4BQ9H444 224 aaKnown RBP31.01■■■□□ 2.56
SPOCK3-221ENST00000512648 EVA1CP58658 441 aa31.01■■■□□ 2.55
SPOCK3-221ENST00000512648 COL16A1Q07092 1604 aaPredicted RBP31■■■□□ 2.55
SPOCK3-221ENST00000512648 PTPRCP08575 1304 aa31■■■□□ 2.55
SPOCK3-221ENST00000512648 PKD1L3Q7Z443 1732 aa31■■■□□ 2.55
SPOCK3-221ENST00000512648 ABCC4O15439 1325 aa30.99■■■□□ 2.55
SPOCK3-221ENST00000512648 EIF4A1P60842 406 aaKnown RBP30.99■■■□□ 2.55
SPOCK3-221ENST00000512648 COL14A1Q05707 1796 aaKnown RBP30.98■■■□□ 2.55
SPOCK3-221ENST00000512648 CCDC30Q5VVM6 783 aa30.98■■■□□ 2.55
SPOCK3-221ENST00000512648 DCAF5Q96JK2 942 aa30.98■■■□□ 2.55
SPOCK3-221ENST00000512648 BTBD11A6QL63 1104 aa30.97■■■□□ 2.55
SPOCK3-221ENST00000512648 TMEM57Q8N5G2 664 aa30.97■■■□□ 2.55
SPOCK3-221ENST00000512648 PHLPP1O60346 1717 aa30.96■■■□□ 2.55
SPOCK3-221ENST00000512648 LARP1Q6PKG0 1096 aaKnown RBP30.95■■■□□ 2.55
SPOCK3-221ENST00000512648 KDM3BQ7LBC6 1761 aa30.95■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms