RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 SKIV2LQ15477 1246 aaKnown RBP10.46□□□□□ -0.73
VCAN-208ENST00000512590 AXDND1Q5T1B0 1012 aaPredicted RBP10.46□□□□□ -0.73
VCAN-208ENST00000512590 SIRT1Q96EB6 747 aa10.46□□□□□ -0.73
VCAN-208ENST00000512590 SYNCQ9H7C4 482 aa10.46□□□□□ -0.73
VCAN-208ENST00000512590 CABP2Q9NPB3 220 aa10.46□□□□□ -0.73
VCAN-208ENST00000512590 HIP1O00291 1037 aa10.46□□□□□ -0.73
VCAN-208ENST00000512590 HMOX1P09601 288 aa10.46□□□□□ -0.73
VCAN-208ENST00000512590 TAF4BQ92750 862 aa10.46□□□□□ -0.73
VCAN-208ENST00000512590 CACYBPQ9HB71 228 aaKnown RBP10.46□□□□□ -0.73
VCAN-208ENST00000512590 ATP2B3Q16720 1220 aa10.46□□□□□ -0.74
VCAN-208ENST00000512590 CENPHQ9H3R5 247 aa10.46□□□□□ -0.74
VCAN-208ENST00000512590 DHX57Q6P158 1386 aaKnown RBP10.46□□□□□ -0.74
VCAN-208ENST00000512590 SNX16P57768 344 aa10.46□□□□□ -0.74
VCAN-208ENST00000512590 ZNF428Q96B54 188 aa10.46□□□□□ -0.74
VCAN-208ENST00000512590 DACH1Q9UI36 760 aa10.46□□□□□ -0.74
VCAN-208ENST00000512590 DDX49Q9Y6V7 483 aaKnown RBP10.46□□□□□ -0.74
VCAN-208ENST00000512590 MIA2Q96PC5 1412 aa10.45□□□□□ -0.74
VCAN-208ENST00000512590 ZNF771Q7L3S4 317 aaPredicted RBP10.45□□□□□ -0.74
VCAN-208ENST00000512590 HAUS7Q99871 368 aa10.45□□□□□ -0.74
VCAN-208ENST00000512590 GTPBP4Q9BZE4 634 aaKnown RBP10.45□□□□□ -0.74
VCAN-208ENST00000512590 BAG4O95429 457 aaKnown RBP10.45□□□□□ -0.74
VCAN-208ENST00000512590 CT47B1P0C2W7 299 aaPredicted RBP10.45□□□□□ -0.74
VCAN-208ENST00000512590 ARID5AQ03989 594 aa10.45□□□□□ -0.74
VCAN-208ENST00000512590 RNF187Q5TA31 235 aaPredicted RBP10.45□□□□□ -0.74
VCAN-208ENST00000512590 ZNF396Q96N95 335 aaPredicted RBP10.45□□□□□ -0.74
VCAN-208ENST00000512590 VEZTQ9HBM0 779 aa10.45□□□□□ -0.74
VCAN-208ENST00000512590 CECR2Q9BXF3 1484 aa10.45□□□□□ -0.74
VCAN-208ENST00000512590 EXOC5O00471 708 aa10.45□□□□□ -0.74
VCAN-208ENST00000512590 NLRP5P59047 1200 aa10.45□□□□□ -0.74
VCAN-208ENST00000512590 STK38Q15208 465 aa10.45□□□□□ -0.74
VCAN-208ENST00000512590 JMYQ8N9B5 988 aa10.45□□□□□ -0.74
VCAN-208ENST00000512590 CDCA7Q9BWT1 371 aaPredicted RBP10.45□□□□□ -0.74
VCAN-208ENST00000512590 FAM13BQ9NYF5 915 aa10.45□□□□□ -0.74
VCAN-208ENST00000512590 WRNQ14191 1432 aaPredicted RBP eCLIP10.45□□□□□ -0.74
VCAN-208ENST00000512590 C8orf37Q96NL8 207 aa10.45□□□□□ -0.74
VCAN-208ENST00000512590 LRRFIP2Q9Y608 721 aaKnown RBP10.45□□□□□ -0.74
VCAN-208ENST00000512590 TSG101Q99816 390 aa10.44□□□□□ -0.74
VCAN-208ENST00000512590 TTC21AQ8NDW8 1320 aa10.44□□□□□ -0.74
VCAN-208ENST00000512590 CCDC85AQ96PX6 553 aaPredicted RBP10.44□□□□□ -0.74
VCAN-208ENST00000512590 ODF2LQ9ULJ1 636 aa10.44□□□□□ -0.74
VCAN-208ENST00000512590 GSTTP1A0A1W2PQM5 241 aa10.44□□□□□ -0.74
VCAN-208ENST00000512590 ZNF530Q6P9A1 599 aaPredicted RBP10.44□□□□□ -0.74
VCAN-208ENST00000512590 DDX46Q7L014 1031 aaKnown RBP10.44□□□□□ -0.74
VCAN-208ENST00000512590 APBB1IPQ7Z5R6 666 aaPredicted RBP10.44□□□□□ -0.74
VCAN-208ENST00000512590 DDX11L8A8MPP1 907 aa10.44□□□□□ -0.74
VCAN-208ENST00000512590 GNAI1P63096 354 aa10.43□□□□□ -0.74
VCAN-208ENST00000512590 PPFIBP1Q86W92 1011 aa10.43□□□□□ -0.74
VCAN-208ENST00000512590 NFKBIBQ15653 356 aa10.43□□□□□ -0.74
VCAN-208ENST00000512590 NACA2Q9H009 215 aa10.43□□□□□ -0.74
VCAN-208ENST00000512590 EEA1Q15075 1411 aa10.43□□□□□ -0.74
VCAN-208ENST00000512590 IFIT1P09914 478 aaKnown RBP10.43□□□□□ -0.74
VCAN-208ENST00000512590 DHX37Q8IY37 1157 aaKnown RBP10.43□□□□□ -0.74
VCAN-208ENST00000512590 PPP1R9BQ96SB3 815 aa10.43□□□□□ -0.74
VCAN-208ENST00000512590 TFCP2L1Q9NZI6 479 aa10.43□□□□□ -0.74
VCAN-208ENST00000512590 IVNS1ABPQ9Y6Y0 642 aa10.43□□□□□ -0.74
VCAN-208ENST00000512590 GOLGA6L10A0A0M3HER8 536 aa10.43□□□□□ -0.74
VCAN-208ENST00000512590 SIL1Q9H173 461 aa10.43□□□□□ -0.74
VCAN-208ENST00000512590 ZC3H6P61129 1189 aaKnown RBP10.42□□□□□ -0.74
VCAN-208ENST00000512590 IDH1O75874 414 aaKnown RBP10.42□□□□□ -0.74
VCAN-208ENST00000512590 IFT57Q9NWB7 429 aa10.42□□□□□ -0.74
VCAN-208ENST00000512590 ACTN2P35609 894 aa10.42□□□□□ -0.74
VCAN-208ENST00000512590 CETN1Q12798 172 aa10.42□□□□□ -0.74
VCAN-208ENST00000512590 TMEM266Q2M3C6 531 aa10.42□□□□□ -0.74
VCAN-208ENST00000512590 SLC26A8Q96RN1 970 aa10.42□□□□□ -0.74
VCAN-208ENST00000512590 PNISRQ8TF01 805 aaKnown RBP10.42□□□□□ -0.74
VCAN-208ENST00000512590 GOLGA3Q08378 1498 aa10.42□□□□□ -0.74
VCAN-208ENST00000512590 KINO60870 393 aaKnown RBP10.42□□□□□ -0.74
VCAN-208ENST00000512590 SURF6O75683 361 aaKnown RBP10.42□□□□□ -0.74
VCAN-208ENST00000512590 HSPA5P11021 654 aaKnown RBP10.42□□□□□ -0.74
VCAN-208ENST00000512590 METTL24Q5JXM2 366 aa10.42□□□□□ -0.74
VCAN-208ENST00000512590 SREK1Q8WXA9 508 aaKnown RBP10.42□□□□□ -0.74
VCAN-208ENST00000512590 CFAP57Q96MR6 1250 aa10.42□□□□□ -0.74
VCAN-208ENST00000512590 CEP126Q9P2H0 1117 aa10.42□□□□□ -0.74
VCAN-208ENST00000512590 RAB3GAP2Q9H2M9 1393 aa10.41□□□□□ -0.74
VCAN-208ENST00000512590 SYCP3Q8IZU3 236 aa10.41□□□□□ -0.74
VCAN-208ENST00000512590 SETD5Q9C0A6 1442 aa10.41□□□□□ -0.74
VCAN-208ENST00000512590 CDKL5O76039 1030 aa10.41□□□□□ -0.74
VCAN-208ENST00000512590 INTS3Q68E01 1043 aaKnown RBP10.41□□□□□ -0.74
VCAN-208ENST00000512590 A0A087WZG4 1122 aa10.41□□□□□ -0.74
VCAN-208ENST00000512590 PHACTR2O75167 634 aa10.41□□□□□ -0.74
VCAN-208ENST00000512590 CUL4BQ13620 913 aa10.41□□□□□ -0.74
VCAN-208ENST00000512590 CFAP70Q5T0N1 1121 aa10.41□□□□□ -0.74
VCAN-208ENST00000512590 STXBP4Q6ZWJ1 553 aa10.41□□□□□ -0.74
VCAN-208ENST00000512590 CEP57L1Q8IYX8 460 aa10.41□□□□□ -0.74
VCAN-208ENST00000512590 FMNL2Q96PY5 1086 aa10.41□□□□□ -0.74
VCAN-208ENST00000512590 CARMIL1Q5VZK9 1371 aa10.41□□□□□ -0.74
VCAN-208ENST00000512590 CCDC14Q49A88 953 aa10.41□□□□□ -0.74
VCAN-208ENST00000512590 CCDC174Q6PII3 467 aa10.41□□□□□ -0.74
VCAN-208ENST00000512590 MPRIPQ6WCQ1 1025 aa10.41□□□□□ -0.74
VCAN-208ENST00000512590 NOP9Q86U38 636 aaKnown RBP10.4□□□□□ -0.74
VCAN-208ENST00000512590 TIGD1Q96MW7 591 aa10.4□□□□□ -0.74
VCAN-208ENST00000512590 RAB34Q9BZG1 259 aa10.4□□□□□ -0.74
VCAN-208ENST00000512590 NBPF3Q9H094 633 aa10.4□□□□□ -0.74
VCAN-208ENST00000512590 MINDY4BA8MYZ0 360 aa10.4□□□□□ -0.74
VCAN-208ENST00000512590 JPH4Q96JJ6 628 aa10.4□□□□□ -0.74
VCAN-208ENST00000512590 DHX8Q14562 1220 aaKnown RBP10.4□□□□□ -0.74
VCAN-208ENST00000512590 DPH6Q7L8W6 267 aa10.4□□□□□ -0.74
VCAN-208ENST00000512590 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.4□□□□□ -0.74
VCAN-208ENST00000512590 CUX2O14529 1486 aa10.4□□□□□ -0.74
VCAN-208ENST00000512590 DCAF1Q9Y4B6 1507 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms