RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 NBPF6Q5VWK0 638 aa20.45■□□□□ 0.86
CCHCR1-229ENST00000512418 NBPF4Q96M43 638 aa20.45■□□□□ 0.86
CCHCR1-229ENST00000512418 CARD14Q9BXL6 1004 aa20.45■□□□□ 0.86
CCHCR1-229ENST00000512418 PCGF6Q9BYE7 350 aa20.45■□□□□ 0.86
CCHCR1-229ENST00000512418 MTFR1LQ9H019 292 aa20.45■□□□□ 0.86
CCHCR1-229ENST00000512418 SLC27A3Q5K4L6 730 aa20.44■□□□□ 0.86
CCHCR1-229ENST00000512418 LRRC4BQ9NT99 713 aa20.44■□□□□ 0.86
CCHCR1-229ENST00000512418 ATF5Q9Y2D1 282 aaPredicted RBP20.44■□□□□ 0.86
CCHCR1-229ENST00000512418 DCAF8L1A6NGE4 600 aa20.43■□□□□ 0.86
CCHCR1-229ENST00000512418 HSP90AB2PQ58FF8 381 aa20.43■□□□□ 0.86
CCHCR1-229ENST00000512418 RAPGEF4Q8WZA2 1011 aa20.43■□□□□ 0.86
CCHCR1-229ENST00000512418 SYTL4Q96C24 671 aaPredicted RBP20.43■□□□□ 0.86
CCHCR1-229ENST00000512418 PRIM1P49642 420 aaKnown RBP20.42■□□□□ 0.86
CCHCR1-229ENST00000512418 USHBP1Q8N6Y0 703 aa20.42■□□□□ 0.86
CCHCR1-229ENST00000512418 ZNF827Q17R98 1081 aa20.41■□□□□ 0.86
CCHCR1-229ENST00000512418 NSD2O96028 1365 aa20.41■□□□□ 0.86
CCHCR1-229ENST00000512418 TATP17735 454 aaPredicted RBP20.4■□□□□ 0.86
CCHCR1-229ENST00000512418 LY75O60449 1722 aa20.39■□□□□ 0.86
CCHCR1-229ENST00000512418 QSER1Q2KHR3 1735 aa20.39■□□□□ 0.86
CCHCR1-229ENST00000512418 AKT1S1Q96B36 256 aa20.39■□□□□ 0.85
CCHCR1-229ENST00000512418 SGIP1Q9BQI5 828 aa20.39■□□□□ 0.85
CCHCR1-229ENST00000512418 ANKRD26Q9UPS8 1709 aa20.39■□□□□ 0.85
CCHCR1-229ENST00000512418 EMILIN1Q9Y6C2 1016 aa20.38■□□□□ 0.85
CCHCR1-229ENST00000512418 PCDH11XQ9BZA7 1347 aa20.37■□□□□ 0.85
CCHCR1-229ENST00000512418 PCDH11YQ9BZA8 1340 aa20.37■□□□□ 0.85
CCHCR1-229ENST00000512418 YY1P25490 414 aa20.36■□□□□ 0.85
CCHCR1-229ENST00000512418 FHDC1Q9C0D6 1143 aaPredicted RBP20.36■□□□□ 0.85
CCHCR1-229ENST00000512418 NCAPD2Q15021 1401 aa20.35■□□□□ 0.85
CCHCR1-229ENST00000512418 SLC16A10Q8TF71 515 aa20.34■□□□□ 0.85
CCHCR1-229ENST00000512418 PNPLA7Q6ZV29 1317 aa20.33■□□□□ 0.85
CCHCR1-229ENST00000512418 TUBGCP6Q96RT7 1819 aa20.33■□□□□ 0.85
CCHCR1-229ENST00000512418 PPM1GO15355 546 aaPredicted RBP20.33■□□□□ 0.85
CCHCR1-229ENST00000512418 KCNQ4P56696 695 aa20.33■□□□□ 0.85
CCHCR1-229ENST00000512418 EIF4G2P78344 907 aaKnown RBP eCLIP20.33■□□□□ 0.85
CCHCR1-229ENST00000512418 ARXQ96QS3 562 aa20.33■□□□□ 0.85
CCHCR1-229ENST00000512418 SYT17Q9BSW7 474 aa20.33■□□□□ 0.85
CCHCR1-229ENST00000512418 POLR3GLQ9BT43 218 aa20.33■□□□□ 0.85
CCHCR1-229ENST00000512418 TFCP2L1Q9NZI6 479 aa20.33■□□□□ 0.85
CCHCR1-229ENST00000512418 CCNL1Q9UK58 526 aaPredicted RBP20.33■□□□□ 0.85
CCHCR1-229ENST00000512418 PKD1L3Q7Z443 1732 aa20.33■□□□□ 0.84
CCHCR1-229ENST00000512418 WASHC2AQ641Q2 1341 aa20.32■□□□□ 0.84
CCHCR1-229ENST00000512418 MAP3K5Q99683 1374 aa20.32■□□□□ 0.84
CCHCR1-229ENST00000512418 UTRNP46939 3433 aa20.31■□□□□ 0.84
CCHCR1-229ENST00000512418 MAP2P11137 1827 aaKnown RBP20.31■□□□□ 0.84
CCHCR1-229ENST00000512418 CYP27B1O15528 508 aa20.3■□□□□ 0.84
CCHCR1-229ENST00000512418 COL24A1Q17RW2 1714 aa20.3■□□□□ 0.84
CCHCR1-229ENST00000512418 TOGARAM1Q9Y4F4 1720 aa20.29■□□□□ 0.84
CCHCR1-229ENST00000512418 HSPA5P11021 654 aaKnown RBP20.28■□□□□ 0.84
CCHCR1-229ENST00000512418 POLD1P28340 1107 aa20.28■□□□□ 0.84
CCHCR1-229ENST00000512418 CCER1Q8TC90 406 aaPredicted RBP20.28■□□□□ 0.84
CCHCR1-229ENST00000512418 POLKQ9UBT6 870 aa20.28■□□□□ 0.84
CCHCR1-229ENST00000512418 C5P01031 1676 aa20.27■□□□□ 0.84
CCHCR1-229ENST00000512418 PALLDQ8WX93 1383 aa20.27■□□□□ 0.84
CCHCR1-229ENST00000512418 HMGB2P26583 209 aaKnown RBP20.27■□□□□ 0.84
CCHCR1-229ENST00000512418 MPRIPQ6WCQ1 1025 aa20.26■□□□□ 0.83
CCHCR1-229ENST00000512418 EYA1Q99502 592 aa20.26■□□□□ 0.83
CCHCR1-229ENST00000512418 SPG7Q9UQ90 795 aa20.26■□□□□ 0.83
CCHCR1-229ENST00000512418 ITGB4P16144 1822 aa20.25■□□□□ 0.83
CCHCR1-229ENST00000512418 NKX1-1Q15270 411 aaPredicted RBP20.25■□□□□ 0.83
CCHCR1-229ENST00000512418 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.25■□□□□ 0.83
CCHCR1-229ENST00000512418 TNNT2P45379 298 aaPredicted RBP20.24■□□□□ 0.83
CCHCR1-229ENST00000512418 SMARCC1Q92922 1105 aaPredicted RBP20.23■□□□□ 0.83
CCHCR1-229ENST00000512418 PANK3Q9H999 370 aa20.23■□□□□ 0.83
CCHCR1-229ENST00000512418 TAF1LQ8IZX4 1826 aa20.23■□□□□ 0.83
CCHCR1-229ENST00000512418 PLEKHG2Q9H7P9 1386 aa20.22■□□□□ 0.83
CCHCR1-229ENST00000512418 EIF4A2Q14240 407 aaKnown RBP20.22■□□□□ 0.83
CCHCR1-229ENST00000512418 MSH5O43196 834 aa20.21■□□□□ 0.83
CCHCR1-229ENST00000512418 COL23A1Q86Y22 540 aaPredicted RBP20.21■□□□□ 0.83
CCHCR1-229ENST00000512418 KLHL34Q8N239 644 aa20.2■□□□□ 0.82
CCHCR1-229ENST00000512418 PIGBQ92521 554 aa20.2■□□□□ 0.82
CCHCR1-229ENST00000512418 IFNL2Q8IZJ0 200 aa20.19■□□□□ 0.82
CCHCR1-229ENST00000512418 FLAD1Q8NFF5 587 aa20.19■□□□□ 0.82
CCHCR1-229ENST00000512418 C4BP0C0L5 1744 aa20.19■□□□□ 0.82
CCHCR1-229ENST00000512418 PHKG2P15735 406 aa20.18■□□□□ 0.82
CCHCR1-229ENST00000512418 IGSF1Q8N6C5 1336 aa20.18■□□□□ 0.82
CCHCR1-229ENST00000512418 CHD4Q14839 1912 aa20.17■□□□□ 0.82
CCHCR1-229ENST00000512418 GOLGB1Q14789 3259 aaKnown RBP20.17■□□□□ 0.82
CCHCR1-229ENST00000512418 TMOD3Q9NYL9 352 aa20.17■□□□□ 0.82
CCHCR1-229ENST00000512418 AK7Q96M32 723 aa20.16■□□□□ 0.82
CCHCR1-229ENST00000512418 GPR162Q16538 588 aa20.15■□□□□ 0.82
CCHCR1-229ENST00000512418 LOC102724428A0A0B4J2F2 783 aa20.14■□□□□ 0.81
CCHCR1-229ENST00000512418 SIK1P57059 783 aa20.14■□□□□ 0.81
CCHCR1-229ENST00000512418 MSL1Q68DK7 614 aa20.14■□□□□ 0.81
CCHCR1-229ENST00000512418 MORC1Q86VD1 984 aa20.14■□□□□ 0.81
CCHCR1-229ENST00000512418 NLGN2Q8NFZ4 835 aa20.13■□□□□ 0.81
CCHCR1-229ENST00000512418 KNSTRNQ9Y448 316 aa20.13■□□□□ 0.81
CCHCR1-229ENST00000512418 UBR3Q6ZT12 1888 aa20.13■□□□□ 0.81
CCHCR1-229ENST00000512418 ZNF784Q8NCA9 323 aaPredicted RBP20.12■□□□□ 0.81
CCHCR1-229ENST00000512418 ASAP1Q9ULH1 1129 aa20.12■□□□□ 0.81
CCHCR1-229ENST00000512418 HSP90AB1P08238 724 aaKnown RBP20.1■□□□□ 0.81
CCHCR1-229ENST00000512418 SSFA2P28290 1259 aa20.1■□□□□ 0.81
CCHCR1-229ENST00000512418 PLEKHO1Q53GL0 409 aaPredicted RBP20.1■□□□□ 0.81
CCHCR1-229ENST00000512418 AMIGO3Q86WK7 504 aa20.1■□□□□ 0.81
CCHCR1-229ENST00000512418 LINC00116Q8NCU8 138 aa20.1■□□□□ 0.81
CCHCR1-229ENST00000512418 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.09■□□□□ 0.81
CCHCR1-229ENST00000512418 PHF14O94880 888 aa20.09■□□□□ 0.81
CCHCR1-229ENST00000512418 AMOTQ4VCS5 1084 aa20.09■□□□□ 0.81
CCHCR1-229ENST00000512418 PELP1Q8IZL8 1130 aaKnown RBP20.09■□□□□ 0.81
CCHCR1-229ENST00000512418 DCAF5Q96JK2 942 aa20.09■□□□□ 0.81
CCHCR1-229ENST00000512418 ATG3Q9NT62 314 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms