RNA–Protein interactions for RNA: ENST00000512394.5

SNX2-211, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-211ENST00000512394 HSP90AB2PQ58FF8 381 aa23.5■■□□□ 1.35
SNX2-211ENST00000512394 PAPPAQ13219 1627 aa23.49■■□□□ 1.35
SNX2-211ENST00000512394 ZCRB1Q8TBF4 217 aaKnown RBP23.49■■□□□ 1.35
SNX2-211ENST00000512394 SPON1Q9HCB6 807 aa23.49■■□□□ 1.35
SNX2-211ENST00000512394 STK32BQ9NY57 414 aa23.49■■□□□ 1.35
SNX2-211ENST00000512394 MAP2P11137 1827 aaKnown RBP23.48■■□□□ 1.35
SNX2-211ENST00000512394 USHBP1Q8N6Y0 703 aa23.48■■□□□ 1.35
SNX2-211ENST00000512394 RAPGEF4Q8WZA2 1011 aa23.48■■□□□ 1.35
SNX2-211ENST00000512394 EMILIN1Q9Y6C2 1016 aa23.47■■□□□ 1.35
SNX2-211ENST00000512394 SLC15A2Q16348 729 aa23.45■■□□□ 1.34
SNX2-211ENST00000512394 TATP17735 454 aaPredicted RBP23.44■■□□□ 1.34
SNX2-211ENST00000512394 PPM1GO15355 546 aaPredicted RBP23.43■■□□□ 1.34
SNX2-211ENST00000512394 SYTL4Q96C24 671 aaPredicted RBP23.43■■□□□ 1.34
SNX2-211ENST00000512394 PPP1R1BQ9UD71 204 aaPredicted RBP23.43■■□□□ 1.34
SNX2-211ENST00000512394 PKD1L3Q7Z443 1732 aa23.42■■□□□ 1.34
SNX2-211ENST00000512394 LY75O60449 1722 aa23.42■■□□□ 1.34
SNX2-211ENST00000512394 PCDH11XQ9BZA7 1347 aa23.41■■□□□ 1.34
SNX2-211ENST00000512394 PCDH11YQ9BZA8 1340 aa23.41■■□□□ 1.34
SNX2-211ENST00000512394 PRIM1P49642 420 aaKnown RBP23.41■■□□□ 1.34
SNX2-211ENST00000512394 NCAPD2Q15021 1401 aa23.41■■□□□ 1.34
SNX2-211ENST00000512394 WASHC2AQ641Q2 1341 aa23.4■■□□□ 1.34
SNX2-211ENST00000512394 PDGFDQ9GZP0 370 aaPredicted RBP23.4■■□□□ 1.34
SNX2-211ENST00000512394 NSD2O96028 1365 aa23.4■■□□□ 1.34
SNX2-211ENST00000512394 SLC27A3Q5K4L6 730 aa23.39■■□□□ 1.33
SNX2-211ENST00000512394 PANK3Q9H999 370 aa23.39■■□□□ 1.33
SNX2-211ENST00000512394 QSER1Q2KHR3 1735 aa23.38■■□□□ 1.33
SNX2-211ENST00000512394 ZBTB7AO95365 584 aa23.37■■□□□ 1.33
SNX2-211ENST00000512394 LRRC4BQ9NT99 713 aa23.37■■□□□ 1.33
SNX2-211ENST00000512394 POLKQ9UBT6 870 aa23.37■■□□□ 1.33
SNX2-211ENST00000512394 TNNT2P45379 298 aaPredicted RBP23.35■■□□□ 1.33
SNX2-211ENST00000512394 KIF7Q2M1P5 1343 aa23.34■■□□□ 1.33
SNX2-211ENST00000512394 ZNF827Q17R98 1081 aa23.34■■□□□ 1.33
SNX2-211ENST00000512394 MTFR1LQ9H019 292 aa23.34■■□□□ 1.33
SNX2-211ENST00000512394 TOGARAM1Q9Y4F4 1720 aa23.33■■□□□ 1.33
SNX2-211ENST00000512394 ITGB4P16144 1822 aa23.32■■□□□ 1.32
SNX2-211ENST00000512394 TUBGCP6Q96RT7 1819 aa23.32■■□□□ 1.32
SNX2-211ENST00000512394 ATF5Q9Y2D1 282 aaPredicted RBP23.32■■□□□ 1.32
SNX2-211ENST00000512394 CYP27B1O15528 508 aa23.31■■□□□ 1.32
SNX2-211ENST00000512394 PTGER2P43116 358 aa23.31■■□□□ 1.32
SNX2-211ENST00000512394 AKT1S1Q96B36 256 aa23.31■■□□□ 1.32
SNX2-211ENST00000512394 EYA1Q99502 592 aa23.31■■□□□ 1.32
SNX2-211ENST00000512394 SPG7Q9UQ90 795 aa23.31■■□□□ 1.32
SNX2-211ENST00000512394 EIF4A2Q14240 407 aaKnown RBP23.29■■□□□ 1.32
SNX2-211ENST00000512394 CCNL1Q9UK58 526 aaPredicted RBP23.29■■□□□ 1.32
SNX2-211ENST00000512394 C5P01031 1676 aa23.28■■□□□ 1.32
SNX2-211ENST00000512394 KNSTRNQ9Y448 316 aa23.28■■□□□ 1.32
SNX2-211ENST00000512394 PLEKHG2Q9H7P9 1386 aa23.27■■□□□ 1.32
SNX2-211ENST00000512394 KCNQ4P56696 695 aa23.27■■□□□ 1.32
SNX2-211ENST00000512394 MORC1Q86VD1 984 aa23.27■■□□□ 1.32
SNX2-211ENST00000512394 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.27■■□□□ 1.321e-9■□□□□ 9.8
SNX2-211ENST00000512394 TFCP2L1Q9NZI6 479 aa23.26■■□□□ 1.31
SNX2-211ENST00000512394 DCAF8L1A6NGE4 600 aa23.25■■□□□ 1.31
SNX2-211ENST00000512394 MPRIPQ6WCQ1 1025 aa23.25■■□□□ 1.31
SNX2-211ENST00000512394 SGIP1Q9BQI5 828 aa23.25■■□□□ 1.31
SNX2-211ENST00000512394 PALLDQ8WX93 1383 aa23.25■■□□□ 1.31
SNX2-211ENST00000512394 TAF1LQ8IZX4 1826 aa23.24■■□□□ 1.31
SNX2-211ENST00000512394 NKX1-1Q15270 411 aaPredicted RBP23.24■■□□□ 1.31
SNX2-211ENST00000512394 PNPLA7Q6ZV29 1317 aa23.24■■□□□ 1.31
SNX2-211ENST00000512394 IGSF1Q8N6C5 1336 aa23.24■■□□□ 1.31
SNX2-211ENST00000512394 COL24A1Q17RW2 1714 aa23.24■■□□□ 1.31
SNX2-211ENST00000512394 HMGB2P26583 209 aaKnown RBP23.23■■□□□ 1.31
SNX2-211ENST00000512394 SLC16A10Q8TF71 515 aa23.23■■□□□ 1.31
SNX2-211ENST00000512394 IFNL2Q8IZJ0 200 aa23.21■■□□□ 1.31
SNX2-211ENST00000512394 SMARCC1Q92922 1105 aaPredicted RBP23.21■■□□□ 1.31
SNX2-211ENST00000512394 PHKG2P15735 406 aa23.2■■□□□ 1.3
SNX2-211ENST00000512394 ARXQ96QS3 562 aa23.2■■□□□ 1.3
SNX2-211ENST00000512394 FHDC1Q9C0D6 1143 aaPredicted RBP23.2■■□□□ 1.3
SNX2-211ENST00000512394 AMER1Q5JTC6 1135 aaPredicted RBP23.19■■□□□ 1.3
SNX2-211ENST00000512394 PIGBQ92521 554 aa23.18■■□□□ 1.3
SNX2-211ENST00000512394 C4BP0C0L5 1744 aa23.17■■□□□ 1.3
SNX2-211ENST00000512394 POLD1P28340 1107 aa23.17■■□□□ 1.3
SNX2-211ENST00000512394 TMOD3Q9NYL9 352 aa23.17■■□□□ 1.3
SNX2-211ENST00000512394 MAP3K5Q99683 1374 aa23.16■■□□□ 1.3
SNX2-211ENST00000512394 SYT17Q9BSW7 474 aa23.16■■□□□ 1.3
SNX2-211ENST00000512394 PER1O15534 1290 aaPredicted RBP23.15■■□□□ 1.3
SNX2-211ENST00000512394 NPC1L1Q9UHC9 1359 aa23.14■■□□□ 1.3
SNX2-211ENST00000512394 MSH5O43196 834 aa23.13■■□□□ 1.29
SNX2-211ENST00000512394 PLEKHO1Q53GL0 409 aaPredicted RBP23.13■■□□□ 1.29
SNX2-211ENST00000512394 HSP90AB1P08238 724 aaKnown RBP23.12■■□□□ 1.29
SNX2-211ENST00000512394 AMOTQ4VCS5 1084 aa23.12■■□□□ 1.29
SNX2-211ENST00000512394 UBR3Q6ZT12 1888 aa23.11■■□□□ 1.29
SNX2-211ENST00000512394 COL23A1Q86Y22 540 aaPredicted RBP23.11■■□□□ 1.29
SNX2-211ENST00000512394 FLAD1Q8NFF5 587 aa23.11■■□□□ 1.29
SNX2-211ENST00000512394 AK7Q96M32 723 aa23.11■■□□□ 1.29
SNX2-211ENST00000512394 KDRP35968 1356 aa23.11■■□□□ 1.29
SNX2-211ENST00000512394 AEBP1Q8IUX7 1158 aa23.1■■□□□ 1.29
SNX2-211ENST00000512394 DCAF5Q96JK2 942 aa23.1■■□□□ 1.29
SNX2-211ENST00000512394 LOC102724428A0A0B4J2F2 783 aa23.09■■□□□ 1.29
SNX2-211ENST00000512394 YY1P25490 414 aa23.09■■□□□ 1.29
SNX2-211ENST00000512394 IL13P35225 146 aa23.09■■□□□ 1.29
SNX2-211ENST00000512394 ZEB1P37275 1124 aaPredicted RBP23.09■■□□□ 1.29
SNX2-211ENST00000512394 SIK1P57059 783 aa23.09■■□□□ 1.29
SNX2-211ENST00000512394 SULT6B1Q6IMI4 303 aa23.09■■□□□ 1.29
SNX2-211ENST00000512394 ZNF530Q6P9A1 599 aaPredicted RBP23.09■■□□□ 1.29
SNX2-211ENST00000512394 ASAP1Q9ULH1 1129 aa23.09■■□□□ 1.29
SNX2-211ENST00000512394 ERVV-2B6SEH9 535 aa23.08■■□□□ 1.29
SNX2-211ENST00000512394 ZNF831Q5JPB2 1677 aa23.08■■□□□ 1.29
SNX2-211ENST00000512394 KDM6AO15550 1401 aaPredicted RBP23.08■■□□□ 1.28
SNX2-211ENST00000512394 C1orf141Q5JVX7 400 aa23.07■■□□□ 1.28
SNX2-211ENST00000512394 CC2D1BQ5T0F9 858 aaKnown RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms