RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 TMEM164Q5U3C3 297 aa8.48□□□□□ -1.05
CHD1-208ENST00000512392 SMC5Q8IY18 1101 aa8.48□□□□□ -1.05
CHD1-208ENST00000512392 STK32AQ8WU08 396 aa8.48□□□□□ -1.05
CHD1-208ENST00000512392 PLA2G2EQ9NZK7 142 aa8.48□□□□□ -1.05
CHD1-208ENST00000512392 PPFIA4O75335 1185 aa8.48□□□□□ -1.05
CHD1-208ENST00000512392 JUNDP17535 347 aa8.48□□□□□ -1.05
CHD1-208ENST00000512392 MMP16P51512 607 aa8.48□□□□□ -1.05
CHD1-208ENST00000512392 HDLBPQ00341 1268 aaKnown RBP8.48□□□□□ -1.05
CHD1-208ENST00000512392 B4GALNT3Q6L9W6 998 aa8.48□□□□□ -1.05
CHD1-208ENST00000512392 HELBQ8NG08 1087 aaPredicted RBP8.48□□□□□ -1.05
CHD1-208ENST00000512392 SLAIN2Q9P270 581 aa8.48□□□□□ -1.05
CHD1-208ENST00000512392 CHPF2Q9P2E5 772 aa8.48□□□□□ -1.05
CHD1-208ENST00000512392 GABBR1Q9UBS5 961 aa8.48□□□□□ -1.05
CHD1-208ENST00000512392 DXOO77932 396 aaKnown RBP8.47□□□□□ -1.05
CHD1-208ENST00000512392 TCEAL1Q15170 157 aa8.47□□□□□ -1.05
CHD1-208ENST00000512392 ALG2Q9H553 416 aa8.47□□□□□ -1.05
CHD1-208ENST00000512392 ZMIZ1Q9ULJ6 1067 aa8.47□□□□□ -1.05
CHD1-208ENST00000512392 SCNN1AP37088 669 aa8.46□□□□□ -1.05
CHD1-208ENST00000512392 CUEDC1Q9NWM3 386 aaPredicted RBP8.46□□□□□ -1.05
CHD1-208ENST00000512392 AP1G2O75843 785 aa8.46□□□□□ -1.06
CHD1-208ENST00000512392 PTMSP20962 102 aa8.46□□□□□ -1.06
CHD1-208ENST00000512392 ARID4AP29374 1257 aaPredicted RBP8.46□□□□□ -1.06
CHD1-208ENST00000512392 GGCXP38435 758 aa8.46□□□□□ -1.06
CHD1-208ENST00000512392 VAC14Q08AM6 782 aa8.46□□□□□ -1.06
CHD1-208ENST00000512392 RAD51AP2Q09MP3 1159 aa8.46□□□□□ -1.06
CHD1-208ENST00000512392 GPR37L1O60883 481 aa8.45□□□□□ -1.06
CHD1-208ENST00000512392 S1PR4O95977 384 aa8.45□□□□□ -1.06
CHD1-208ENST00000512392 LYPD8Q6UX82 237 aa8.45□□□□□ -1.06
CHD1-208ENST00000512392 PRDM9Q9NQV7 894 aa8.45□□□□□ -1.06
CHD1-208ENST00000512392 MAFBQ9Y5Q3 323 aaPredicted RBP8.45□□□□□ -1.06
CHD1-208ENST00000512392 SSFA2P28290 1259 aa8.44□□□□□ -1.06
CHD1-208ENST00000512392 TSC1Q92574 1164 aa8.44□□□□□ -1.06
CHD1-208ENST00000512392 PRM3Q9NNZ6 103 aa8.44□□□□□ -1.06
CHD1-208ENST00000512392 MAGEC2Q9UBF1 373 aaPredicted RBP8.44□□□□□ -1.06
CHD1-208ENST00000512392 IQSEC3Q9UPP2 1182 aaPredicted RBP8.44□□□□□ -1.06
CHD1-208ENST00000512392 CREB3O43889 395 aa8.44□□□□□ -1.06
CHD1-208ENST00000512392 CTDSPL2Q05D32 466 aa8.44□□□□□ -1.06
CHD1-208ENST00000512392 SPOCK3Q9BQ16 436 aa8.44□□□□□ -1.06
CHD1-208ENST00000512392 BIN2Q9UBW5 565 aaPredicted RBP8.44□□□□□ -1.06
CHD1-208ENST00000512392 PRKAG2Q9UGJ0 569 aa8.44□□□□□ -1.06
CHD1-208ENST00000512392 PAX3P23760 479 aa8.43□□□□□ -1.06
CHD1-208ENST00000512392 FOXD4Q12950 439 aaPredicted RBP8.43□□□□□ -1.06
CHD1-208ENST00000512392 PTPRNQ16849 979 aa8.43□□□□□ -1.06
CHD1-208ENST00000512392 LDLRAD1Q5T700 205 aa8.43□□□□□ -1.06
CHD1-208ENST00000512392 FAM43BQ6ZT52 329 aaPredicted RBP8.43□□□□□ -1.06
CHD1-208ENST00000512392 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.43□□□□□ -1.06
CHD1-208ENST00000512392 U2SURPO15042 1029 aaKnown RBP8.42□□□□□ -1.06
CHD1-208ENST00000512392 GTF2F1P35269 517 aaKnown RBP eCLIP8.42□□□□□ -1.06
CHD1-208ENST00000512392 PPP1R18Q6NYC8 613 aa8.42□□□□□ -1.06
CHD1-208ENST00000512392 GJD4Q96KN9 370 aaPredicted RBP8.42□□□□□ -1.06
CHD1-208ENST00000512392 UBA5Q9GZZ9 404 aa8.42□□□□□ -1.06
CHD1-208ENST00000512392 USP17L8P0C7I0 530 aa8.41□□□□□ -1.06
CHD1-208ENST00000512392 PNMA2Q9UL42 364 aa8.41□□□□□ -1.06
CHD1-208ENST00000512392 RNF223E7ERA6 249 aa8.41□□□□□ -1.06
CHD1-208ENST00000512392 SOCS7O14512 581 aa8.41□□□□□ -1.06
CHD1-208ENST00000512392 PER1O15534 1290 aaPredicted RBP8.41□□□□□ -1.06
CHD1-208ENST00000512392 TBC1D9Q6ZT07 1266 aa8.41□□□□□ -1.06
CHD1-208ENST00000512392 TINF2Q9BSI4 451 aa8.41□□□□□ -1.06
CHD1-208ENST00000512392 NOP58Q9Y2X3 529 aaKnown RBP8.41□□□□□ -1.06
CHD1-208ENST00000512392 KANK4Q5T7N3 995 aaPredicted RBP8.4□□□□□ -1.06
CHD1-208ENST00000512392 ANKLE1Q8NAG6 615 aa8.4□□□□□ -1.06
CHD1-208ENST00000512392 NUDT12Q9BQG2 462 aa8.4□□□□□ -1.06
CHD1-208ENST00000512392 A0A0G2JS52 829 aa8.39□□□□□ -1.07
CHD1-208ENST00000512392 CCNYL3P0C7X3 344 aa8.39□□□□□ -1.07
CHD1-208ENST00000512392 EVA1BQ9NVM1 165 aa8.39□□□□□ -1.07
CHD1-208ENST00000512392 AAMPQ13685 434 aa8.39□□□□□ -1.07
CHD1-208ENST00000512392 WASHC4Q2M389 1173 aa8.39□□□□□ -1.07
CHD1-208ENST00000512392 LRRN4Q8WUT4 740 aa8.39□□□□□ -1.07
CHD1-208ENST00000512392 ZSWIM4Q9H7M6 989 aa8.39□□□□□ -1.07
CHD1-208ENST00000512392 FCF1Q9Y324 198 aaKnown RBP8.39□□□□□ -1.07
CHD1-208ENST00000512392 RPS6KL1Q9Y6S9 549 aa8.39□□□□□ -1.07
CHD1-208ENST00000512392 PPEF1O14829 653 aaPredicted RBP8.38□□□□□ -1.07
CHD1-208ENST00000512392 ZFYVE27Q5T4F4 411 aa8.38□□□□□ -1.07
CHD1-208ENST00000512392 JAZF1Q86VZ6 243 aa8.38□□□□□ -1.07
CHD1-208ENST00000512392 PMFBP1Q8TBY8 1022 aa8.38□□□□□ -1.07
CHD1-208ENST00000512392 G3BP2Q9UN86 482 aaKnown RBP8.38□□□□□ -1.07
CHD1-208ENST00000512392 DMGDHQ9UI17 866 aaKnown RBP8.37□□□□□ -1.07
CHD1-208ENST00000512392 SH3BP5O60239 455 aa8.37□□□□□ -1.07
CHD1-208ENST00000512392 F12P00748 615 aaPredicted RBP8.37□□□□□ -1.07
CHD1-208ENST00000512392 ATP2B1P20020 1258 aa8.37□□□□□ -1.07
CHD1-208ENST00000512392 IBSPP21815 317 aaPredicted RBP8.37□□□□□ -1.07
CHD1-208ENST00000512392 KCNH2Q12809 1159 aa8.37□□□□□ -1.07
CHD1-208ENST00000512392 LONRF3Q496Y0 759 aa8.37□□□□□ -1.07
CHD1-208ENST00000512392 HSP90AB2PQ58FF8 381 aa8.37□□□□□ -1.07
CHD1-208ENST00000512392 NT5DC4Q86YG4 428 aa8.37□□□□□ -1.07
CHD1-208ENST00000512392 CCDC24Q8N4L8 307 aa8.37□□□□□ -1.07
CHD1-208ENST00000512392 SCAMP3O14828 347 aaKnown RBP8.36□□□□□ -1.07
CHD1-208ENST00000512392 METTL16Q86W50 562 aaKnown RBP8.36□□□□□ -1.07
CHD1-208ENST00000512392 RPUSD2Q8IZ73 545 aaKnown RBP8.36□□□□□ -1.07
CHD1-208ENST00000512392 MAF1Q9H063 256 aa8.36□□□□□ -1.07
CHD1-208ENST00000512392 ELOAQ14241 798 aaKnown RBP8.35□□□□□ -1.07
CHD1-208ENST00000512392 STAG1Q8WVM7 1258 aa8.35□□□□□ -1.07
CHD1-208ENST00000512392 NDUFB9Q9Y6M9 179 aa8.35□□□□□ -1.07
CHD1-208ENST00000512392 CTHP32929 405 aa8.35□□□□□ -1.07
CHD1-208ENST00000512392 MRPL58Q14197 206 aaKnown RBP8.35□□□□□ -1.07
CHD1-208ENST00000512392 BMS1Q14692 1282 aaKnown RBP8.35□□□□□ -1.07
CHD1-208ENST00000512392 PLEKHG6Q3KR16 790 aa8.35□□□□□ -1.07
CHD1-208ENST00000512392 IRF2BPLQ9H1B7 796 aa8.35□□□□□ -1.07
CHD1-208ENST00000512392 HMX1Q9NP08 348 aaPredicted RBP8.35□□□□□ -1.07
CHD1-208ENST00000512392 COL4A3BPQ9Y5P4 624 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms