RNA–Protein interactions for RNA: ENST00000512242.5

COPB2-209, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 5

Gene COPB2, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-209ENST00000512242 RGPD2P0DJD1 1756 aa15.15■□□□□ 0.02
COPB2-209ENST00000512242 BCL9O00512 1426 aa15.15■□□□□ 0.02
COPB2-209ENST00000512242 HSPA5P11021 654 aaKnown RBP15.14■□□□□ 0.01
COPB2-209ENST00000512242 EIF4G2P78344 907 aaKnown RBP eCLIP15.14■□□□□ 0.01
COPB2-209ENST00000512242 SYTL4Q96C24 671 aaPredicted RBP15.14■□□□□ 0.01
COPB2-209ENST00000512242 NSD3Q9BZ95 1437 aa15.14■□□□□ 0.01
COPB2-209ENST00000512242 ZCRB1Q8TBF4 217 aaKnown RBP15.12■□□□□ 0.01
COPB2-209ENST00000512242 PDGFDQ9GZP0 370 aaPredicted RBP15.12■□□□□ 0.01
COPB2-209ENST00000512242 SPON1Q9HCB6 807 aa15.12■□□□□ 0.01
COPB2-209ENST00000512242 STK32BQ9NY57 414 aa15.12■□□□□ 0.01
COPB2-209ENST00000512242 PPP1R1BQ9UD71 204 aaPredicted RBP15.12■□□□□ 0.01
COPB2-209ENST00000512242 KIF20BQ96Q89 1820 aa15.12■□□□□ 0.01
COPB2-209ENST00000512242 RAPGEF4Q8WZA2 1011 aa15.11■□□□□ 0.01
COPB2-209ENST00000512242 EMILIN1Q9Y6C2 1016 aa15.11■□□□□ 0.01
COPB2-209ENST00000512242 TNNT2P45379 298 aaPredicted RBP15.1■□□□□ 0.01
COPB2-209ENST00000512242 PRIM1P49642 420 aaKnown RBP15.1■□□□□ 0.01
COPB2-209ENST00000512242 CGNL1Q0VF96 1302 aa15.1■□□□□ 0.01
COPB2-209ENST00000512242 RTL1A6NKG5 1358 aa15.1■□□□□ 0.01
COPB2-209ENST00000512242 MYOM1P52179 1685 aa15.09■□□□□ 0.01
COPB2-209ENST00000512242 FAM208AQ9UK61 1670 aaKnown RBP15.09■□□□□ 0.01
COPB2-209ENST00000512242 SMG6Q86US8 1419 aaKnown RBP15.09■□□□□ 0.01
COPB2-209ENST00000512242 RGPD3A6NKT7 1758 aaPredicted RBP15.09■□□□□ 0.01
COPB2-209ENST00000512242 RGPD4Q7Z3J3 1758 aa15.09■□□□□ 0.01
COPB2-209ENST00000512242 ZBTB7AO95365 584 aa15.09■□□□□ 0.01
COPB2-209ENST00000512242 TATP17735 454 aaPredicted RBP15.09■□□□□ 0.01
COPB2-209ENST00000512242 SLC15A2Q16348 729 aa15.09■□□□□ 0.01
COPB2-209ENST00000512242 CACNB1Q02641 598 aaPredicted RBP15.08■□□□□ 0
COPB2-209ENST00000512242 ATF5Q9Y2D1 282 aaPredicted RBP15.08■□□□□ 0
COPB2-209ENST00000512242 NHSQ6T4R5 1651 aa15.08■□□□□ 0
COPB2-209ENST00000512242 INSRP06213 1382 aa15.08■□□□□ 0
COPB2-209ENST00000512242 FLT4P35916 1363 aa15.08■□□□□ 0
COPB2-209ENST00000512242 BTAF1O14981 1849 aa15.08■□□□□ 0
COPB2-209ENST00000512242 MEGF6O75095 1541 aa15.07■□□□□ 0
COPB2-209ENST00000512242 KCNQ4P56696 695 aa15.07■□□□□ 0
COPB2-209ENST00000512242 PANK3Q9H999 370 aa15.07■□□□□ 0
COPB2-209ENST00000512242 MAP2P11137 1827 aaKnown RBP15.07■□□□□ 0
COPB2-209ENST00000512242 LRRC4BQ9NT99 713 aa15.06■□□□□ 0
COPB2-209ENST00000512242 SAMD1Q6SPF0 538 aaPredicted RBP15.05■□□□□ -0
COPB2-209ENST00000512242 POLKQ9UBT6 870 aa15.04■□□□□ -0
COPB2-209ENST00000512242 KIF24Q5T7B8 1368 aa15.03■□□□□ -0
COPB2-209ENST00000512242 WASHC2AQ641Q2 1341 aa15.02■□□□□ -0
COPB2-209ENST00000512242 ZNF827Q17R98 1081 aa15.02■□□□□ -0
COPB2-209ENST00000512242 EYA1Q99502 592 aa15.02■□□□□ -0
COPB2-209ENST00000512242 DOT1LQ8TEK3 1739 aa15.01□□□□□ -0.01
COPB2-209ENST00000512242 SLC27A3Q5K4L6 730 aa15.01□□□□□ -0.01
COPB2-209ENST00000512242 MPRIPQ6WCQ1 1025 aa15.01□□□□□ -0.01
COPB2-209ENST00000512242 SHANK3Q9BYB0 1731 aa15□□□□□ -0.01
COPB2-209ENST00000512242 PCDH11XQ9BZA7 1347 aa15□□□□□ -0.01
COPB2-209ENST00000512242 PCDH11YQ9BZA8 1340 aa15□□□□□ -0.01
COPB2-209ENST00000512242 CYP27B1O15528 508 aa15□□□□□ -0.01
COPB2-209ENST00000512242 CCNL1Q9UK58 526 aaPredicted RBP15□□□□□ -0.01
COPB2-209ENST00000512242 CASZ1Q86V15 1759 aa15□□□□□ -0.01
COPB2-209ENST00000512242 PTGER2P43116 358 aa14.99□□□□□ -0.01
COPB2-209ENST00000512242 MORC1Q86VD1 984 aa14.99□□□□□ -0.01
COPB2-209ENST00000512242 MTFR1LQ9H019 292 aa14.99□□□□□ -0.01
COPB2-209ENST00000512242 TFCP2L1Q9NZI6 479 aa14.99□□□□□ -0.01
COPB2-209ENST00000512242 KNSTRNQ9Y448 316 aa14.99□□□□□ -0.01
COPB2-209ENST00000512242 EIF4A2Q14240 407 aaKnown RBP14.98□□□□□ -0.01
COPB2-209ENST00000512242 AKT1S1Q96B36 256 aa14.98□□□□□ -0.01
COPB2-209ENST00000512242 SPG7Q9UQ90 795 aa14.98□□□□□ -0.01
COPB2-209ENST00000512242 NSD2O96028 1365 aa14.98□□□□□ -0.01
COPB2-209ENST00000512242 CNGB1Q14028 1251 aaPredicted RBP14.95□□□□□ -0.02
COPB2-209ENST00000512242 KLHL34Q8N239 644 aa14.95□□□□□ -0.02
COPB2-209ENST00000512242 FHDC1Q9C0D6 1143 aaPredicted RBP14.95□□□□□ -0.02
COPB2-209ENST00000512242 ANKRD26Q9UPS8 1709 aa14.95□□□□□ -0.02
COPB2-209ENST00000512242 PNPLA7Q6ZV29 1317 aa14.94□□□□□ -0.02
COPB2-209ENST00000512242 ARXQ96QS3 562 aa14.94□□□□□ -0.02
COPB2-209ENST00000512242 PAPPAQ13219 1627 aa14.94□□□□□ -0.02
COPB2-209ENST00000512242 KIF7Q2M1P5 1343 aa14.93□□□□□ -0.02
COPB2-209ENST00000512242 PIGBQ92521 554 aa14.93□□□□□ -0.02
COPB2-209ENST00000512242 SYT17Q9BSW7 474 aa14.93□□□□□ -0.02
COPB2-209ENST00000512242 LY75O60449 1722 aa14.92□□□□□ -0.02
COPB2-209ENST00000512242 ITGB4P16144 1822 aa14.92□□□□□ -0.02
COPB2-209ENST00000512242 IFNL2Q8IZJ0 200 aa14.92□□□□□ -0.02
COPB2-209ENST00000512242 SGIP1Q9BQI5 828 aa14.92□□□□□ -0.02
COPB2-209ENST00000512242 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.92□□□□□ -0.026e-10■■■■□ 19.5
COPB2-209ENST00000512242 PALLDQ8WX93 1383 aa14.92□□□□□ -0.02
COPB2-209ENST00000512242 PHKG2P15735 406 aa14.91□□□□□ -0.02
COPB2-209ENST00000512242 NKX1-1Q15270 411 aaPredicted RBP14.91□□□□□ -0.02
COPB2-209ENST00000512242 SLC16A10Q8TF71 515 aa14.91□□□□□ -0.02
COPB2-209ENST00000512242 SMARCC1Q92922 1105 aaPredicted RBP14.91□□□□□ -0.02
COPB2-209ENST00000512242 TMOD3Q9NYL9 352 aa14.91□□□□□ -0.02
COPB2-209ENST00000512242 YY1P25490 414 aa14.9□□□□□ -0.02
COPB2-209ENST00000512242 POLD1P28340 1107 aa14.9□□□□□ -0.02
COPB2-209ENST00000512242 COL23A1Q86Y22 540 aaPredicted RBP14.9□□□□□ -0.02
COPB2-209ENST00000512242 SPINK5Q9NQ38 1064 aaPredicted RBP14.9□□□□□ -0.02
COPB2-209ENST00000512242 NCAPD2Q15021 1401 aa14.9□□□□□ -0.02
COPB2-209ENST00000512242 PKD1L3Q7Z443 1732 aa14.89□□□□□ -0.03
COPB2-209ENST00000512242 PLEKHO1Q53GL0 409 aaPredicted RBP14.89□□□□□ -0.03
COPB2-209ENST00000512242 AMER1Q5JTC6 1135 aaPredicted RBP14.89□□□□□ -0.03
COPB2-209ENST00000512242 CC2D1BQ5T0F9 858 aaKnown RBP14.89□□□□□ -0.03
COPB2-209ENST00000512242 MSL1Q68DK7 614 aa14.89□□□□□ -0.03
COPB2-209ENST00000512242 AEBP1Q8IUX7 1158 aa14.89□□□□□ -0.03
COPB2-209ENST00000512242 ASAP1Q9ULH1 1129 aa14.89□□□□□ -0.03
COPB2-209ENST00000512242 IGSF1Q8N6C5 1336 aa14.89□□□□□ -0.03
COPB2-209ENST00000512242 TUBGCP6Q96RT7 1819 aa14.88□□□□□ -0.03
COPB2-209ENST00000512242 CAPN15O75808 1086 aa14.88□□□□□ -0.03
COPB2-209ENST00000512242 SULT6B1Q6IMI4 303 aa14.88□□□□□ -0.03
COPB2-209ENST00000512242 SMIM5Q71RC9 77 aa14.88□□□□□ -0.03
COPB2-209ENST00000512242 TOGARAM1Q9Y4F4 1720 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms