RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 CACNA1AO00555 2505 aa9.68□□□□□ -0.86
CLDND1-225ENST00000512147 PIK3C2AO00443 1686 aa9.68□□□□□ -0.86
CLDND1-225ENST00000512147 SPATA31E1Q6ZUB1 1445 aa9.68□□□□□ -0.86
CLDND1-225ENST00000512147 ANKARQ7Z5J8 1434 aa9.68□□□□□ -0.86
CLDND1-225ENST00000512147 DPY19L2Q6NUT2 758 aa9.68□□□□□ -0.86
CLDND1-225ENST00000512147 GPR101Q96P66 508 aaPredicted RBP9.68□□□□□ -0.86
CLDND1-225ENST00000512147 CCNL1Q9UK58 526 aaPredicted RBP9.68□□□□□ -0.86
CLDND1-225ENST00000512147 IFT172Q9UG01 1749 aa9.68□□□□□ -0.86
CLDND1-225ENST00000512147 ZBTB7CA1YPR0 619 aa9.67□□□□□ -0.86
CLDND1-225ENST00000512147 POTECB2RU33 542 aa9.67□□□□□ -0.86
CLDND1-225ENST00000512147 HMGB2P26583 209 aaKnown RBP9.67□□□□□ -0.86
CLDND1-225ENST00000512147 ECE1P42892 770 aa9.67□□□□□ -0.86
CLDND1-225ENST00000512147 ABT1Q9ULW3 272 aaKnown RBP9.67□□□□□ -0.86
CLDND1-225ENST00000512147 COL18A1P39060 1754 aa9.67□□□□□ -0.86
CLDND1-225ENST00000512147 ANKRD50Q9ULJ7 1429 aa9.66□□□□□ -0.86
CLDND1-225ENST00000512147 PAXIP1Q6ZW49 1069 aaPredicted RBP9.66□□□□□ -0.86
CLDND1-225ENST00000512147 DAPK1P53355 1430 aa9.65□□□□□ -0.86
CLDND1-225ENST00000512147 DPEP1P16444 411 aa9.65□□□□□ -0.86
CLDND1-225ENST00000512147 GRM1Q13255 1194 aa9.65□□□□□ -0.86
CLDND1-225ENST00000512147 SIRT1Q96EB6 747 aa9.65□□□□□ -0.86
CLDND1-225ENST00000512147 COL25A1Q9BXS0 654 aaPredicted RBP9.65□□□□□ -0.86
CLDND1-225ENST00000512147 PRDM6Q9NQX0 595 aa9.65□□□□□ -0.86
CLDND1-225ENST00000512147 MEGF6O75095 1541 aa9.65□□□□□ -0.86
CLDND1-225ENST00000512147 WDR17Q8IZU2 1322 aa9.64□□□□□ -0.87
CLDND1-225ENST00000512147 MINK1Q8N4C8 1332 aaPredicted RBP9.64□□□□□ -0.87
CLDND1-225ENST00000512147 GCP02774 474 aa9.64□□□□□ -0.87
CLDND1-225ENST00000512147 SMIM5Q71RC9 77 aa9.64□□□□□ -0.87
CLDND1-225ENST00000512147 DCAF5Q96JK2 942 aa9.64□□□□□ -0.87
CLDND1-225ENST00000512147 CAPNS2Q96L46 248 aa9.64□□□□□ -0.87
CLDND1-225ENST00000512147 PIM2Q9P1W9 311 aa9.64□□□□□ -0.87
CLDND1-225ENST00000512147 COLQQ9Y215 455 aaPredicted RBP9.64□□□□□ -0.87
CLDND1-225ENST00000512147 RPGRIP1LQ68CZ1 1315 aa9.63□□□□□ -0.87
CLDND1-225ENST00000512147 POTEIP0CG38 1075 aa9.63□□□□□ -0.87
CLDND1-225ENST00000512147 POTEJP0CG39 1038 aa9.63□□□□□ -0.87
CLDND1-225ENST00000512147 MAP2K2P36507 400 aa9.63□□□□□ -0.87
CLDND1-225ENST00000512147 DALRD3Q5D0E6 543 aaKnown RBP9.63□□□□□ -0.87
CLDND1-225ENST00000512147 TMEM132EQ6IEE7 984 aa9.63□□□□□ -0.87
CLDND1-225ENST00000512147 CARD10Q9BWT7 1032 aa9.63□□□□□ -0.87
CLDND1-225ENST00000512147 N4BP2Q86UW6 1770 aaPredicted RBP9.63□□□□□ -0.87
CLDND1-225ENST00000512147 ITGBL1O95965 494 aaPredicted RBP9.62□□□□□ -0.87
CLDND1-225ENST00000512147 CSB-PGBD3P0DP91 1061 aa9.62□□□□□ -0.87
CLDND1-225ENST00000512147 LMNB1P20700 586 aa9.62□□□□□ -0.87
CLDND1-225ENST00000512147 COL9A1P20849 921 aa9.62□□□□□ -0.87
CLDND1-225ENST00000512147 ABTB2Q8N961 1025 aa9.62□□□□□ -0.87
CLDND1-225ENST00000512147 SYTL4Q96C24 671 aaPredicted RBP9.62□□□□□ -0.87
CLDND1-225ENST00000512147 TRIOBPQ9H2D6 2365 aa9.61□□□□□ -0.87
CLDND1-225ENST00000512147 SAFB2Q14151 953 aaKnown RBP eCLIP9.61□□□□□ -0.87
CLDND1-225ENST00000512147 LDHDQ86WU2 507 aa9.61□□□□□ -0.87
CLDND1-225ENST00000512147 SNX27Q96L92 541 aa9.61□□□□□ -0.87
CLDND1-225ENST00000512147 WNK3Q9BYP7 1800 aa9.61□□□□□ -0.87
CLDND1-225ENST00000512147 SBF1O95248 1867 aa9.6□□□□□ -0.87
CLDND1-225ENST00000512147 KNDC1Q76NI1 1749 aa9.6□□□□□ -0.87
CLDND1-225ENST00000512147 PLA2G5P39877 138 aa9.6□□□□□ -0.87
CLDND1-225ENST00000512147 NLRP13Q86W25 1043 aa9.6□□□□□ -0.87
CLDND1-225ENST00000512147 FAM122AQ96E09 287 aa9.6□□□□□ -0.87
CLDND1-225ENST00000512147 MMP10P09238 476 aa9.59□□□□□ -0.87
CLDND1-225ENST00000512147 APLP2Q06481 763 aa9.59□□□□□ -0.87
CLDND1-225ENST00000512147 KANK4Q5T7N3 995 aaPredicted RBP9.59□□□□□ -0.87
CLDND1-225ENST00000512147 CYP4F22Q6NT55 531 aa9.59□□□□□ -0.87
CLDND1-225ENST00000512147 ARFGEF1Q9Y6D6 1849 aa9.59□□□□□ -0.88
CLDND1-225ENST00000512147 PHF14O94880 888 aa9.58□□□□□ -0.88
CLDND1-225ENST00000512147 LTBP1Q14766 1721 aa9.58□□□□□ -0.88
CLDND1-225ENST00000512147 EIF3AQ14152 1382 aaKnown RBP9.58□□□□□ -0.88
CLDND1-225ENST00000512147 ERBB3P21860 1342 aa9.57□□□□□ -0.88
CLDND1-225ENST00000512147 KCNA3P22001 575 aa9.57□□□□□ -0.88
CLDND1-225ENST00000512147 PRIM1P49642 420 aaKnown RBP9.57□□□□□ -0.88
CLDND1-225ENST00000512147 RASSF7Q02833 373 aa9.57□□□□□ -0.88
CLDND1-225ENST00000512147 CCDC87Q9NVE4 849 aa9.57□□□□□ -0.88
CLDND1-225ENST00000512147 CCDC7Q96M83 1385 aa9.57□□□□□ -0.88
CLDND1-225ENST00000512147 ABCC6O95255 1503 aa9.56□□□□□ -0.88
CLDND1-225ENST00000512147 NUP155O75694 1391 aa9.56□□□□□ -0.88
CLDND1-225ENST00000512147 HOXD11P31277 338 aaPredicted RBP9.56□□□□□ -0.88
CLDND1-225ENST00000512147 AK7Q96M32 723 aa9.56□□□□□ -0.88
CLDND1-225ENST00000512147 PRAM1Q96QH2 718 aa9.56□□□□□ -0.88
CLDND1-225ENST00000512147 POGKQ9P215 609 aa9.56□□□□□ -0.88
CLDND1-225ENST00000512147 CLEC11AQ9Y240 323 aa9.56□□□□□ -0.88
CLDND1-225ENST00000512147 AXIN2Q9Y2T1 843 aa9.56□□□□□ -0.88
CLDND1-225ENST00000512147 ITSN1Q15811 1721 aa9.56□□□□□ -0.88
CLDND1-225ENST00000512147 KIAA1551Q9HCM1 1747 aa9.56□□□□□ -0.88
CLDND1-225ENST00000512147 THSD7BQ9C0I4 1608 aa9.56□□□□□ -0.88
CLDND1-225ENST00000512147 KDM6AO15550 1401 aaPredicted RBP9.56□□□□□ -0.88
CLDND1-225ENST00000512147 PPIP5K1Q6PFW1 1433 aa9.56□□□□□ -0.88
CLDND1-225ENST00000512147 YTHDC2Q9H6S0 1430 aaKnown RBP9.56□□□□□ -0.88
CLDND1-225ENST00000512147 KIF13BQ9NQT8 1826 aa9.55□□□□□ -0.88
CLDND1-225ENST00000512147 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.55□□□□□ -0.88
CLDND1-225ENST00000512147 IQCA1LA6NCM1 817 aa9.55□□□□□ -0.88
CLDND1-225ENST00000512147 AOC2O75106 756 aa9.55□□□□□ -0.88
CLDND1-225ENST00000512147 BRPF1P55201 1214 aaPredicted RBP9.55□□□□□ -0.88
CLDND1-225ENST00000512147 HPS5Q9UPZ3 1129 aa9.55□□□□□ -0.88
CLDND1-225ENST00000512147 KIF1BO60333 1816 aa9.54□□□□□ -0.88
CLDND1-225ENST00000512147 PPARGC1BQ86YN6 1023 aaKnown RBP9.54□□□□□ -0.88
CLDND1-225ENST00000512147 USP54Q70EL1 1684 aa9.54□□□□□ -0.88
CLDND1-225ENST00000512147 LY75O60449 1722 aa9.53□□□□□ -0.88
CLDND1-225ENST00000512147 USP47Q96K76 1375 aa9.53□□□□□ -0.88
CLDND1-225ENST00000512147 IL2RBP14784 551 aa9.53□□□□□ -0.88
CLDND1-225ENST00000512147 EAPPQ56P03 285 aaPredicted RBP9.53□□□□□ -0.88
CLDND1-225ENST00000512147 CTU1Q7Z7A3 348 aaKnown RBP9.53□□□□□ -0.88
CLDND1-225ENST00000512147 CNTROBQ8N137 903 aa9.53□□□□□ -0.88
CLDND1-225ENST00000512147 QRICH2Q9H0J4 1663 aa9.52□□□□□ -0.89
CLDND1-225ENST00000512147 BRCA1P38398 1863 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms