RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 ANKRD24Q8TF21 1146 aa26.43■■□□□ 1.82
SMAD1-211ENST00000512019 PRKRIP1Q9H875 184 aaPredicted RBP26.43■■□□□ 1.82
SMAD1-211ENST00000512019 BTAF1O14981 1849 aa26.43■■□□□ 1.82
SMAD1-211ENST00000512019 FBLN1P23142 703 aa26.42■■□□□ 1.82
SMAD1-211ENST00000512019 MAP2P11137 1827 aaKnown RBP26.42■■□□□ 1.82
SMAD1-211ENST00000512019 RGPD2P0DJD1 1756 aa26.41■■□□□ 1.82
SMAD1-211ENST00000512019 TXNRD1Q16881 649 aa26.41■■□□□ 1.82
SMAD1-211ENST00000512019 ACSBG1Q96GR2 724 aa26.41■■□□□ 1.82
SMAD1-211ENST00000512019 PPP1R1BQ9UD71 204 aaPredicted RBP26.41■■□□□ 1.82
SMAD1-211ENST00000512019 AMPHP49418 695 aa26.4■■□□□ 1.82
SMAD1-211ENST00000512019 POLKQ9UBT6 870 aa26.4■■□□□ 1.82
SMAD1-211ENST00000512019 FAM208AQ9UK61 1670 aaKnown RBP26.4■■□□□ 1.82
SMAD1-211ENST00000512019 FLT4P35916 1363 aa26.39■■□□□ 1.82
SMAD1-211ENST00000512019 IL2RBP14784 551 aa26.39■■□□□ 1.82
SMAD1-211ENST00000512019 EMILIN1Q9Y6C2 1016 aa26.39■■□□□ 1.82
SMAD1-211ENST00000512019 MYBBP1AQ9BQG0 1328 aaKnown RBP26.39■■□□□ 1.81
SMAD1-211ENST00000512019 PPP2R1AP30153 589 aa26.38■■□□□ 1.81
SMAD1-211ENST00000512019 PPM1GO15355 546 aaPredicted RBP26.37■■□□□ 1.81
SMAD1-211ENST00000512019 IP6K1Q92551 441 aa26.36■■□□□ 1.81
SMAD1-211ENST00000512019 ZBTB7AO95365 584 aa26.35■■□□□ 1.81
SMAD1-211ENST00000512019 HOXC9P31274 260 aa26.35■■□□□ 1.81
SMAD1-211ENST00000512019 MTHFSP49914 203 aa26.35■■□□□ 1.81
SMAD1-211ENST00000512019 PAPPAQ13219 1627 aa26.35■■□□□ 1.81
SMAD1-211ENST00000512019 LTV1Q96GA3 475 aaPredicted RBP26.34■■□□□ 1.81
SMAD1-211ENST00000512019 STK32BQ9NY57 414 aa26.34■■□□□ 1.81
SMAD1-211ENST00000512019 SLC15A2Q16348 729 aa26.33■■□□□ 1.81
SMAD1-211ENST00000512019 SHANK3Q9BYB0 1731 aa26.32■■□□□ 1.8
SMAD1-211ENST00000512019 INSRP06213 1382 aa26.32■■□□□ 1.8
SMAD1-211ENST00000512019 CFAP53Q96M91 514 aa26.3■■□□□ 1.8
SMAD1-211ENST00000512019 ATF5Q9Y2D1 282 aaPredicted RBP26.3■■□□□ 1.8
SMAD1-211ENST00000512019 DOT1LQ8TEK3 1739 aa26.29■■□□□ 1.8
SMAD1-211ENST00000512019 PTGER2P43116 358 aa26.29■■□□□ 1.8
SMAD1-211ENST00000512019 HSP90AB2PQ58FF8 381 aa26.28■■□□□ 1.8
SMAD1-211ENST00000512019 DDX54Q8TDD1 881 aaKnown RBP26.25■■□□□ 1.79
SMAD1-211ENST00000512019 COL3A1P02461 1466 aaPredicted RBP26.24■■□□□ 1.79
SMAD1-211ENST00000512019 YY1P25490 414 aa26.24■■□□□ 1.79
SMAD1-211ENST00000512019 TUBGCP6Q96RT7 1819 aa26.23■■□□□ 1.79
SMAD1-211ENST00000512019 LRRC4BQ9NT99 713 aa26.23■■□□□ 1.79
SMAD1-211ENST00000512019 ZNF827Q17R98 1081 aa26.22■■□□□ 1.79
SMAD1-211ENST00000512019 MEGF6O75095 1541 aa26.21■■□□□ 1.79
SMAD1-211ENST00000512019 DIAPH1O60610 1272 aaKnown RBP26.21■■□□□ 1.79
SMAD1-211ENST00000512019 LY75O60449 1722 aa26.21■■□□□ 1.79
SMAD1-211ENST00000512019 QSER1Q2KHR3 1735 aa26.21■■□□□ 1.79
SMAD1-211ENST00000512019 EIF4A2Q14240 407 aaKnown RBP26.2■■□□□ 1.78
SMAD1-211ENST00000512019 MTFR1LQ9H019 292 aa26.2■■□□□ 1.78
SMAD1-211ENST00000512019 SGIP1Q9BQI5 828 aa26.19■■□□□ 1.78
SMAD1-211ENST00000512019 DCAF8L1A6NGE4 600 aa26.17■■□□□ 1.78
SMAD1-211ENST00000512019 IL13P35225 146 aa26.17■■□□□ 1.78
SMAD1-211ENST00000512019 FHDC1Q9C0D6 1143 aaPredicted RBP26.17■■□□□ 1.78
SMAD1-211ENST00000512019 NUDCQ9Y266 331 aa26.16■■□□□ 1.78
SMAD1-211ENST00000512019 PRIM1P49642 420 aaKnown RBP26.15■■□□□ 1.78
SMAD1-211ENST00000512019 KCNQ4P56696 695 aa26.15■■□□□ 1.78
SMAD1-211ENST00000512019 NBPF6Q5VWK0 638 aa26.15■■□□□ 1.78
SMAD1-211ENST00000512019 USHBP1Q8N6Y0 703 aa26.15■■□□□ 1.78
SMAD1-211ENST00000512019 SYTL4Q96C24 671 aaPredicted RBP26.15■■□□□ 1.78
SMAD1-211ENST00000512019 NBPF4Q96M43 638 aa26.15■■□□□ 1.78
SMAD1-211ENST00000512019 ZCRB1Q8TBF4 217 aaKnown RBP26.14■■□□□ 1.78
SMAD1-211ENST00000512019 SYT17Q9BSW7 474 aa26.14■■□□□ 1.78
SMAD1-211ENST00000512019 AKT1S1Q96B36 256 aa26.13■■□□□ 1.77
SMAD1-211ENST00000512019 MRS2Q9HD23 443 aa26.13■■□□□ 1.77
SMAD1-211ENST00000512019 COL24A1Q17RW2 1714 aa26.13■■□□□ 1.77
SMAD1-211ENST00000512019 MIER1Q8N108 512 aa26.12■■□□□ 1.77
SMAD1-211ENST00000512019 IGSF1Q8N6C5 1336 aa26.12■■□□□ 1.77
SMAD1-211ENST00000512019 CCER2I3L3R5 266 aa26.11■■□□□ 1.77
SMAD1-211ENST00000512019 EYA1Q99502 592 aa26.11■■□□□ 1.77
SMAD1-211ENST00000512019 U2SURPO15042 1029 aaKnown RBP26.1■■□□□ 1.77
SMAD1-211ENST00000512019 SLC27A3Q5K4L6 730 aa26.1■■□□□ 1.77
SMAD1-211ENST00000512019 NCAPD2Q15021 1401 aa26.1■■□□□ 1.77
SMAD1-211ENST00000512019 ARXQ96QS3 562 aa26.09■■□□□ 1.77
SMAD1-211ENST00000512019 PNPLA7Q6ZV29 1317 aa26.08■■□□□ 1.77
SMAD1-211ENST00000512019 CHD4Q14839 1912 aa26.08■■□□□ 1.76
SMAD1-211ENST00000512019 WDR43Q15061 677 aaKnown RBP eCLIP26.07■■□□□ 1.76
SMAD1-211ENST00000512019 CCDC184Q52MB2 194 aa26.07■■□□□ 1.76
SMAD1-211ENST00000512019 U2AF1L5P0DN76 240 aaPredicted RBP26.06■■□□□ 1.76
SMAD1-211ENST00000512019 U2AF1Q01081 240 aaKnown RBP eCLIP26.06■■□□□ 1.76
SMAD1-211ENST00000512019 TOGARAM1Q9Y4F4 1720 aa26.05■■□□□ 1.76
SMAD1-211ENST00000512019 ITGB4P16144 1822 aa26.05■■□□□ 1.76
SMAD1-211ENST00000512019 KDRP35968 1356 aa26.05■■□□□ 1.76
SMAD1-211ENST00000512019 SULT6B1Q6IMI4 303 aa26.04■■□□□ 1.76
SMAD1-211ENST00000512019 RAPGEF4Q8WZA2 1011 aa26.04■■□□□ 1.76
SMAD1-211ENST00000512019 C5P01031 1676 aa26.03■■□□□ 1.76
SMAD1-211ENST00000512019 TAF1LQ8IZX4 1826 aa26.03■■□□□ 1.76
SMAD1-211ENST00000512019 PKD1L3Q7Z443 1732 aa26.02■■□□□ 1.76
SMAD1-211ENST00000512019 TATP17735 454 aaPredicted RBP26.02■■□□□ 1.76
SMAD1-211ENST00000512019 TFCP2L1Q9NZI6 479 aa26.02■■□□□ 1.76
SMAD1-211ENST00000512019 HMOX1P09601 288 aa26.01■■□□□ 1.75
SMAD1-211ENST00000512019 MAP3K5Q99683 1374 aa26.01■■□□□ 1.75
SMAD1-211ENST00000512019 PLEKHG2Q9H7P9 1386 aa26.01■■□□□ 1.75
SMAD1-211ENST00000512019 CCNL1Q9UK58 526 aaPredicted RBP26.01■■□□□ 1.75
SMAD1-211ENST00000512019 AEBP1Q8IUX7 1158 aa26■■□□□ 1.75
SMAD1-211ENST00000512019 SLC16A10Q8TF71 515 aa26■■□□□ 1.75
SMAD1-211ENST00000512019 FCHSD2O94868 740 aa25.98■■□□□ 1.75
SMAD1-211ENST00000512019 KLHL34Q8N239 644 aa25.98■■□□□ 1.75
SMAD1-211ENST00000512019 PNISRQ8TF01 805 aaKnown RBP25.98■■□□□ 1.75
SMAD1-211ENST00000512019 PCDH11XQ9BZA7 1347 aa25.97■■□□□ 1.75
SMAD1-211ENST00000512019 PCDH11YQ9BZA8 1340 aa25.97■■□□□ 1.75
SMAD1-211ENST00000512019 PNNQ9H307 717 aaKnown RBP25.97■■□□□ 1.75
SMAD1-211ENST00000512019 UTRNP46939 3433 aa25.97■■□□□ 1.75
SMAD1-211ENST00000512019 RSPH6AQ9H0K4 717 aa25.96■■□□□ 1.75
SMAD1-211ENST00000512019 CYP27B1O15528 508 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms