RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 ZCRB1Q8TBF4 217 aaKnown RBP21.24■□□□□ 0.99
COL1A1-213ENST00000511732 SPON1Q9HCB6 807 aa21.24■□□□□ 0.99
COL1A1-213ENST00000511732 PAPPAQ13219 1627 aa21.24■□□□□ 0.99
COL1A1-213ENST00000511732 KIF24Q5T7B8 1368 aa21.23■□□□□ 0.99
COL1A1-213ENST00000511732 SLC15A2Q16348 729 aa21.23■□□□□ 0.99
COL1A1-213ENST00000511732 ANKRD26Q9UPS8 1709 aa21.23■□□□□ 0.99
COL1A1-213ENST00000511732 SMG6Q86US8 1419 aaKnown RBP21.22■□□□□ 0.99
COL1A1-213ENST00000511732 STK32BQ9NY57 414 aa21.22■□□□□ 0.99
COL1A1-213ENST00000511732 MAP2P11137 1827 aaKnown RBP21.22■□□□□ 0.99
COL1A1-213ENST00000511732 LRRC4BQ9NT99 713 aa21.21■□□□□ 0.99
COL1A1-213ENST00000511732 PRIM1P49642 420 aaKnown RBP21.2■□□□□ 0.98
COL1A1-213ENST00000511732 NSD2O96028 1365 aa21.2■□□□□ 0.98
COL1A1-213ENST00000511732 ZBTB7AO95365 584 aa21.19■□□□□ 0.98
COL1A1-213ENST00000511732 CGNL1Q0VF96 1302 aa21.19■□□□□ 0.98
COL1A1-213ENST00000511732 RAPGEF4Q8WZA2 1011 aa21.18■□□□□ 0.98
COL1A1-213ENST00000511732 SYTL4Q96C24 671 aaPredicted RBP21.18■□□□□ 0.98
COL1A1-213ENST00000511732 PPM1GO15355 546 aaPredicted RBP21.17■□□□□ 0.98
COL1A1-213ENST00000511732 LY75O60449 1722 aa21.16■□□□□ 0.98
COL1A1-213ENST00000511732 TATP17735 454 aaPredicted RBP21.16■□□□□ 0.98
COL1A1-213ENST00000511732 ZNF827Q17R98 1081 aa21.16■□□□□ 0.98
COL1A1-213ENST00000511732 PPP1R1BQ9UD71 204 aaPredicted RBP21.16■□□□□ 0.98
COL1A1-213ENST00000511732 NCAPD2Q15021 1401 aa21.15■□□□□ 0.98
COL1A1-213ENST00000511732 WASHC2AQ641Q2 1341 aa21.15■□□□□ 0.98
COL1A1-213ENST00000511732 PTGER2P43116 358 aa21.15■□□□□ 0.98
COL1A1-213ENST00000511732 PANK3Q9H999 370 aa21.15■□□□□ 0.98
COL1A1-213ENST00000511732 POLKQ9UBT6 870 aa21.15■□□□□ 0.98
COL1A1-213ENST00000511732 ATF5Q9Y2D1 282 aaPredicted RBP21.15■□□□□ 0.98
COL1A1-213ENST00000511732 KCNQ4P56696 695 aa21.14■□□□□ 0.97
COL1A1-213ENST00000511732 PKD1L3Q7Z443 1732 aa21.13■□□□□ 0.97
COL1A1-213ENST00000511732 TNNT2P45379 298 aaPredicted RBP21.12■□□□□ 0.97
COL1A1-213ENST00000511732 SLC27A3Q5K4L6 730 aa21.12■□□□□ 0.97
COL1A1-213ENST00000511732 AKT1S1Q96B36 256 aa21.12■□□□□ 0.97
COL1A1-213ENST00000511732 TOGARAM1Q9Y4F4 1720 aa21.12■□□□□ 0.97
COL1A1-213ENST00000511732 CYP27B1O15528 508 aa21.11■□□□□ 0.97
COL1A1-213ENST00000511732 EYA1Q99502 592 aa21.11■□□□□ 0.97
COL1A1-213ENST00000511732 PCDH11XQ9BZA7 1347 aa21.1■□□□□ 0.97
COL1A1-213ENST00000511732 PCDH11YQ9BZA8 1340 aa21.1■□□□□ 0.97
COL1A1-213ENST00000511732 QSER1Q2KHR3 1735 aa21.1■□□□□ 0.97
COL1A1-213ENST00000511732 SGIP1Q9BQI5 828 aa21.1■□□□□ 0.97
COL1A1-213ENST00000511732 MTFR1LQ9H019 292 aa21.1■□□□□ 0.97
COL1A1-213ENST00000511732 TUBGCP6Q96RT7 1819 aa21.1■□□□□ 0.97
COL1A1-213ENST00000511732 ITGB4P16144 1822 aa21.08■□□□□ 0.96
COL1A1-213ENST00000511732 EIF4A2Q14240 407 aaKnown RBP21.07■□□□□ 0.96
COL1A1-213ENST00000511732 PNPLA7Q6ZV29 1317 aa21.05■□□□□ 0.96
COL1A1-213ENST00000511732 CCNL1Q9UK58 526 aaPredicted RBP21.05■□□□□ 0.96
COL1A1-213ENST00000511732 MPRIPQ6WCQ1 1025 aa21.04■□□□□ 0.96
COL1A1-213ENST00000511732 NKX1-1Q15270 411 aaPredicted RBP21.03■□□□□ 0.96
COL1A1-213ENST00000511732 COL24A1Q17RW2 1714 aa21.02■□□□□ 0.96
COL1A1-213ENST00000511732 FHDC1Q9C0D6 1143 aaPredicted RBP21.02■□□□□ 0.96
COL1A1-213ENST00000511732 SPG7Q9UQ90 795 aa21.02■□□□□ 0.96
COL1A1-213ENST00000511732 C5P01031 1676 aa21.02■□□□□ 0.95
COL1A1-213ENST00000511732 KIF7Q2M1P5 1343 aa21.02■□□□□ 0.95
COL1A1-213ENST00000511732 SYT17Q9BSW7 474 aa21.01■□□□□ 0.95
COL1A1-213ENST00000511732 TFCP2L1Q9NZI6 479 aa21.01■□□□□ 0.95
COL1A1-213ENST00000511732 TAF1LQ8IZX4 1826 aa21.01■□□□□ 0.95
COL1A1-213ENST00000511732 PALLDQ8WX93 1383 aa21■□□□□ 0.95
COL1A1-213ENST00000511732 MORC1Q86VD1 984 aa21■□□□□ 0.95
COL1A1-213ENST00000511732 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21■□□□□ 0.95
COL1A1-213ENST00000511732 IGSF1Q8N6C5 1336 aa21■□□□□ 0.95
COL1A1-213ENST00000511732 SLC16A10Q8TF71 515 aa20.99■□□□□ 0.95
COL1A1-213ENST00000511732 PIGBQ92521 554 aa20.99■□□□□ 0.95
COL1A1-213ENST00000511732 ARXQ96QS3 562 aa20.99■□□□□ 0.95
COL1A1-213ENST00000511732 PHKG2P15735 406 aa20.98■□□□□ 0.95
COL1A1-213ENST00000511732 KNSTRNQ9Y448 316 aa20.98■□□□□ 0.95
COL1A1-213ENST00000511732 AMER1Q5JTC6 1135 aaPredicted RBP20.97■□□□□ 0.95
COL1A1-213ENST00000511732 COL23A1Q86Y22 540 aaPredicted RBP20.96■□□□□ 0.95
COL1A1-213ENST00000511732 IFNL2Q8IZJ0 200 aa20.96■□□□□ 0.95
COL1A1-213ENST00000511732 SMARCC1Q92922 1105 aaPredicted RBP20.94■□□□□ 0.94
COL1A1-213ENST00000511732 C4BP0C0L5 1744 aa20.94■□□□□ 0.94
COL1A1-213ENST00000511732 DCAF8L1A6NGE4 600 aa20.93■□□□□ 0.94
COL1A1-213ENST00000511732 PER1O15534 1290 aaPredicted RBP20.93■□□□□ 0.94
COL1A1-213ENST00000511732 AEBP1Q8IUX7 1158 aa20.93■□□□□ 0.94
COL1A1-213ENST00000511732 PLEKHG2Q9H7P9 1386 aa20.93■□□□□ 0.94
COL1A1-213ENST00000511732 TMOD3Q9NYL9 352 aa20.92■□□□□ 0.94
COL1A1-213ENST00000511732 MAP3K5Q99683 1374 aa20.92■□□□□ 0.94
COL1A1-213ENST00000511732 YY1P25490 414 aa20.91■□□□□ 0.94
COL1A1-213ENST00000511732 AMIGO3Q86WK7 504 aa20.91■□□□□ 0.94
COL1A1-213ENST00000511732 ASAP1Q9ULH1 1129 aa20.91■□□□□ 0.94
COL1A1-213ENST00000511732 MSH5O43196 834 aa20.9■□□□□ 0.94
COL1A1-213ENST00000511732 POLD1P28340 1107 aa20.9■□□□□ 0.94
COL1A1-213ENST00000511732 UBR3Q6ZT12 1888 aa20.9■□□□□ 0.94
COL1A1-213ENST00000511732 IL13P35225 146 aa20.89■□□□□ 0.93
COL1A1-213ENST00000511732 SMIM5Q71RC9 77 aa20.89■□□□□ 0.93
COL1A1-213ENST00000511732 ATG3Q9NT62 314 aa20.89■□□□□ 0.93
COL1A1-213ENST00000511732 LOC102724428A0A0B4J2F2 783 aa20.88■□□□□ 0.93
COL1A1-213ENST00000511732 SIK1P57059 783 aa20.88■□□□□ 0.93
COL1A1-213ENST00000511732 PLEKHO1Q53GL0 409 aaPredicted RBP20.88■□□□□ 0.93
COL1A1-213ENST00000511732 KDM6AO15550 1401 aaPredicted RBP20.87■□□□□ 0.93
COL1A1-213ENST00000511732 KDRP35968 1356 aa20.87■□□□□ 0.93
COL1A1-213ENST00000511732 ITPK1Q13572 414 aa20.87■□□□□ 0.93
COL1A1-213ENST00000511732 MSL1Q68DK7 614 aa20.87■□□□□ 0.93
COL1A1-213ENST00000511732 SULT6B1Q6IMI4 303 aa20.87■□□□□ 0.93
COL1A1-213ENST00000511732 KLHL34Q8N239 644 aa20.87■□□□□ 0.93
COL1A1-213ENST00000511732 LINC00116Q8NCU8 138 aa20.87■□□□□ 0.93
COL1A1-213ENST00000511732 UTRNP46939 3433 aa20.87■□□□□ 0.93
COL1A1-213ENST00000511732 MTHFSP49914 203 aa20.86■□□□□ 0.93
COL1A1-213ENST00000511732 CC2D1BQ5T0F9 858 aaKnown RBP20.86■□□□□ 0.93
COL1A1-213ENST00000511732 ZNF530Q6P9A1 599 aaPredicted RBP20.86■□□□□ 0.93
COL1A1-213ENST00000511732 HMGB2P26583 209 aaKnown RBP20.85■□□□□ 0.93
COL1A1-213ENST00000511732 AMOTQ4VCS5 1084 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms