RNA–Protein interactions for RNA: ENST00000511722.5

AFF1-208, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 4

Gene AFF1, Length 638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-208ENST00000511722 ZNF827Q17R98 1081 aa25.08■■□□□ 1.61
AFF1-208ENST00000511722 HSP90AB2PQ58FF8 381 aa25.08■■□□□ 1.61
AFF1-208ENST00000511722 MYOM1P52179 1685 aa25.07■■□□□ 1.6
AFF1-208ENST00000511722 ZCRB1Q8TBF4 217 aaKnown RBP25.07■■□□□ 1.6
AFF1-208ENST00000511722 PRIM1P49642 420 aaKnown RBP25.06■■□□□ 1.6
AFF1-208ENST00000511722 NSD3Q9BZ95 1437 aa25.05■■□□□ 1.6
AFF1-208ENST00000511722 SYTL4Q96C24 671 aaPredicted RBP25.05■■□□□ 1.6
AFF1-208ENST00000511722 NSD2O96028 1365 aa25.05■■□□□ 1.6
AFF1-208ENST00000511722 SHANK3Q9BYB0 1731 aa25.04■■□□□ 1.6
AFF1-208ENST00000511722 KCNQ4P56696 695 aa25.04■■□□□ 1.6
AFF1-208ENST00000511722 INSRP06213 1382 aa25.03■■□□□ 1.6
AFF1-208ENST00000511722 KIF20BQ96Q89 1820 aa25.02■■□□□ 1.6
AFF1-208ENST00000511722 SGIP1Q9BQI5 828 aa25.02■■□□□ 1.6
AFF1-208ENST00000511722 EMILIN1Q9Y6C2 1016 aa25.02■■□□□ 1.6
AFF1-208ENST00000511722 AKT1S1Q96B36 256 aa25■■□□□ 1.59
AFF1-208ENST00000511722 MTFR1LQ9H019 292 aa25■■□□□ 1.59
AFF1-208ENST00000511722 FLT4P35916 1363 aa25■■□□□ 1.59
AFF1-208ENST00000511722 DOT1LQ8TEK3 1739 aa25■■□□□ 1.59
AFF1-208ENST00000511722 SMG6Q86US8 1419 aaKnown RBP24.99■■□□□ 1.59
AFF1-208ENST00000511722 KAT6BQ8WYB5 2073 aa24.99■■□□□ 1.59
AFF1-208ENST00000511722 RAPGEF4Q8WZA2 1011 aa24.98■■□□□ 1.59
AFF1-208ENST00000511722 SLC27A3Q5K4L6 730 aa24.97■■□□□ 1.59
AFF1-208ENST00000511722 FHDC1Q9C0D6 1143 aaPredicted RBP24.96■■□□□ 1.59
AFF1-208ENST00000511722 GOLGB1Q14789 3259 aaKnown RBP24.96■■□□□ 1.59
AFF1-208ENST00000511722 KIF24Q5T7B8 1368 aa24.95■■□□□ 1.59
AFF1-208ENST00000511722 CGNL1Q0VF96 1302 aa24.95■■□□□ 1.58
AFF1-208ENST00000511722 TATP17735 454 aaPredicted RBP24.95■■□□□ 1.58
AFF1-208ENST00000511722 PPM1GO15355 546 aaPredicted RBP24.94■■□□□ 1.58
AFF1-208ENST00000511722 SYT17Q9BSW7 474 aa24.94■■□□□ 1.58
AFF1-208ENST00000511722 POLR3GLQ9BT43 218 aa24.94■■□□□ 1.58
AFF1-208ENST00000511722 PNPLA7Q6ZV29 1317 aa24.93■■□□□ 1.58
AFF1-208ENST00000511722 YY1P25490 414 aa24.93■■□□□ 1.58
AFF1-208ENST00000511722 CYP27B1O15528 508 aa24.91■■□□□ 1.58
AFF1-208ENST00000511722 ARXQ96QS3 562 aa24.9■■□□□ 1.58
AFF1-208ENST00000511722 LY75O60449 1722 aa24.89■■□□□ 1.58
AFF1-208ENST00000511722 PCDH11XQ9BZA7 1347 aa24.89■■□□□ 1.58
AFF1-208ENST00000511722 PCDH11YQ9BZA8 1340 aa24.89■■□□□ 1.58
AFF1-208ENST00000511722 TFCP2L1Q9NZI6 479 aa24.89■■□□□ 1.58
AFF1-208ENST00000511722 CCNL1Q9UK58 526 aaPredicted RBP24.89■■□□□ 1.58
AFF1-208ENST00000511722 WASHC2AQ641Q2 1341 aa24.88■■□□□ 1.57
AFF1-208ENST00000511722 POLKQ9UBT6 870 aa24.88■■□□□ 1.57
AFF1-208ENST00000511722 NCAPD2Q15021 1401 aa24.87■■□□□ 1.57
AFF1-208ENST00000511722 DCAF8L1A6NGE4 600 aa24.87■■□□□ 1.57
AFF1-208ENST00000511722 ANKRD26Q9UPS8 1709 aa24.86■■□□□ 1.57
AFF1-208ENST00000511722 TNNT2P45379 298 aaPredicted RBP24.86■■□□□ 1.57
AFF1-208ENST00000511722 EYA1Q99502 592 aa24.86■■□□□ 1.57
AFF1-208ENST00000511722 TUBGCP6Q96RT7 1819 aa24.85■■□□□ 1.57
AFF1-208ENST00000511722 MPRIPQ6WCQ1 1025 aa24.85■■□□□ 1.57
AFF1-208ENST00000511722 QSER1Q2KHR3 1735 aa24.83■■□□□ 1.57
AFF1-208ENST00000511722 SLC16A10Q8TF71 515 aa24.83■■□□□ 1.57
AFF1-208ENST00000511722 TOGARAM1Q9Y4F4 1720 aa24.83■■□□□ 1.57
AFF1-208ENST00000511722 PANK3Q9H999 370 aa24.82■■□□□ 1.56
AFF1-208ENST00000511722 PKD1L3Q7Z443 1732 aa24.81■■□□□ 1.56
AFF1-208ENST00000511722 COL23A1Q86Y22 540 aaPredicted RBP24.81■■□□□ 1.56
AFF1-208ENST00000511722 KIF7Q2M1P5 1343 aa24.81■■□□□ 1.56
AFF1-208ENST00000511722 PALLDQ8WX93 1383 aa24.8■■□□□ 1.56
AFF1-208ENST00000511722 MAP3K5Q99683 1374 aa24.8■■□□□ 1.56
AFF1-208ENST00000511722 EIF4A2Q14240 407 aaKnown RBP24.8■■□□□ 1.56
AFF1-208ENST00000511722 NKX1-1Q15270 411 aaPredicted RBP24.79■■□□□ 1.56
AFF1-208ENST00000511722 PIGBQ92521 554 aa24.79■■□□□ 1.56
AFF1-208ENST00000511722 MAP2P11137 1827 aaKnown RBP24.79■■□□□ 1.56
AFF1-208ENST00000511722 COL24A1Q17RW2 1714 aa24.78■■□□□ 1.56
AFF1-208ENST00000511722 POLD1P28340 1107 aa24.77■■□□□ 1.56
AFF1-208ENST00000511722 KLHL34Q8N239 644 aa24.77■■□□□ 1.56
AFF1-208ENST00000511722 SPG7Q9UQ90 795 aa24.77■■□□□ 1.56
AFF1-208ENST00000511722 MSH5O43196 834 aa24.76■■□□□ 1.55
AFF1-208ENST00000511722 AMIGO3Q86WK7 504 aa24.75■■□□□ 1.55
AFF1-208ENST00000511722 C5P01031 1676 aa24.75■■□□□ 1.55
AFF1-208ENST00000511722 MSL1Q68DK7 614 aa24.74■■□□□ 1.55
AFF1-208ENST00000511722 SMIM5Q71RC9 77 aa24.74■■□□□ 1.55
AFF1-208ENST00000511722 PHKG2P15735 406 aa24.73■■□□□ 1.55
AFF1-208ENST00000511722 NLGN2Q8NFZ4 835 aa24.73■■□□□ 1.55
AFF1-208ENST00000511722 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.73■■□□□ 1.556e-8■□□□□ 8.4
AFF1-208ENST00000511722 ITGB4P16144 1822 aa24.72■■□□□ 1.55
AFF1-208ENST00000511722 KNSTRNQ9Y448 316 aa24.72■■□□□ 1.55
AFF1-208ENST00000511722 IGSF1Q8N6C5 1336 aa24.7■■□□□ 1.54
AFF1-208ENST00000511722 IFNL2Q8IZJ0 200 aa24.7■■□□□ 1.54
AFF1-208ENST00000511722 SMARCC1Q92922 1105 aaPredicted RBP24.7■■□□□ 1.54
AFF1-208ENST00000511722 ASAP1Q9ULH1 1129 aa24.7■■□□□ 1.54
AFF1-208ENST00000511722 TAF1LQ8IZX4 1826 aa24.68■■□□□ 1.54
AFF1-208ENST00000511722 GPR162Q16538 588 aa24.68■■□□□ 1.54
AFF1-208ENST00000511722 TMOD3Q9NYL9 352 aa24.68■■□□□ 1.54
AFF1-208ENST00000511722 C4BP0C0L5 1744 aa24.67■■□□□ 1.54
AFF1-208ENST00000511722 ZNF784Q8NCA9 323 aaPredicted RBP24.67■■□□□ 1.54
AFF1-208ENST00000511722 LINC00116Q8NCU8 138 aa24.67■■□□□ 1.54
AFF1-208ENST00000511722 LOC102724428A0A0B4J2F2 783 aa24.66■■□□□ 1.54
AFF1-208ENST00000511722 SIK1P57059 783 aa24.66■■□□□ 1.54
AFF1-208ENST00000511722 ITPK1Q13572 414 aa24.66■■□□□ 1.54
AFF1-208ENST00000511722 MORC1Q86VD1 984 aa24.66■■□□□ 1.54
AFF1-208ENST00000511722 PHF14O94880 888 aa24.65■■□□□ 1.54
AFF1-208ENST00000511722 AEBP1Q8IUX7 1158 aa24.65■■□□□ 1.54
AFF1-208ENST00000511722 AK7Q96M32 723 aa24.65■■□□□ 1.54
AFF1-208ENST00000511722 ATG3Q9NT62 314 aa24.65■■□□□ 1.54
AFF1-208ENST00000511722 PELP1Q8IZL8 1130 aaKnown RBP24.64■■□□□ 1.54
AFF1-208ENST00000511722 FLAD1Q8NFF5 587 aa24.63■■□□□ 1.53
AFF1-208ENST00000511722 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.62■■□□□ 1.53
AFF1-208ENST00000511722 PLEKHG2Q9H7P9 1386 aa24.6■■□□□ 1.53
AFF1-208ENST00000511722 YBX3P16989 372 aaKnown RBP eCLIP24.6■■□□□ 1.533e-16■□□□□ 8.5
AFF1-208ENST00000511722 ATP6V1AP38606 617 aa24.6■■□□□ 1.53
AFF1-208ENST00000511722 AMER1Q5JTC6 1135 aaPredicted RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms