RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 MRPL12P52815 198 aaKnown RBP5.91□□□□□ -1.46
PTPN13-209ENST00000511467 CCDC171Q6TFL3 1326 aa5.9□□□□□ -1.46
PTPN13-209ENST00000511467 BMP15O95972 392 aa5.9□□□□□ -1.46
PTPN13-209ENST00000511467 ZRSR2Q15696 482 aaKnown RBP5.9□□□□□ -1.46
PTPN13-209ENST00000511467 KNDC1Q76NI1 1749 aa5.9□□□□□ -1.46
PTPN13-209ENST00000511467 HMGN5P82970 282 aaKnown RBP5.9□□□□□ -1.46
PTPN13-209ENST00000511467 EHMT1Q9H9B1 1298 aa5.9□□□□□ -1.46
PTPN13-209ENST00000511467 MYO9BQ13459 2157 aa5.9□□□□□ -1.46
PTPN13-209ENST00000511467 AGLP35573 1532 aa5.9□□□□□ -1.46
PTPN13-209ENST00000511467 DZIP1LQ8IYY4 767 aaKnown RBP5.9□□□□□ -1.46
PTPN13-209ENST00000511467 MIER1Q8N108 512 aa5.9□□□□□ -1.46
PTPN13-209ENST00000511467 ZNF396Q96N95 335 aaPredicted RBP5.9□□□□□ -1.46
PTPN13-209ENST00000511467 SMC2O95347 1197 aa5.9□□□□□ -1.47
PTPN13-209ENST00000511467 STARD3NLO95772 234 aa5.9□□□□□ -1.47
PTPN13-209ENST00000511467 TATP17735 454 aaPredicted RBP5.9□□□□□ -1.47
PTPN13-209ENST00000511467 CLASRPQ8N2M8 674 aaKnown RBP5.9□□□□□ -1.47
PTPN13-209ENST00000511467 CEP131Q9UPN4 1083 aa5.9□□□□□ -1.47
PTPN13-209ENST00000511467 RIMS1Q86UR5 1692 aaKnown RBP5.9□□□□□ -1.47
PTPN13-209ENST00000511467 A2ML1A8K2U0 1454 aa5.9□□□□□ -1.47
PTPN13-209ENST00000511467 PAK3O75914 559 aaPredicted RBP5.9□□□□□ -1.47
PTPN13-209ENST00000511467 SETQ01105 290 aaPredicted RBP5.9□□□□□ -1.47
PTPN13-209ENST00000511467 ATF7IPQ6VMQ6 1270 aa5.9□□□□□ -1.47
PTPN13-209ENST00000511467 VPS37DQ86XT2 251 aa5.9□□□□□ -1.47
PTPN13-209ENST00000511467 DNAJC2Q99543 621 aaKnown RBP5.9□□□□□ -1.47
PTPN13-209ENST00000511467 RALYLQ86SE5 291 aaKnown RBP5.9□□□□□ -1.47
PTPN13-209ENST00000511467 CFAP45Q9UL16 551 aa5.9□□□□□ -1.47
PTPN13-209ENST00000511467 TNRQ92752 1358 aa5.89□□□□□ -1.47
PTPN13-209ENST00000511467 H3BQV1 296 aa5.89□□□□□ -1.47
PTPN13-209ENST00000511467 IFFO2Q5TF58 517 aa5.89□□□□□ -1.47
PTPN13-209ENST00000511467 HOOK2Q96ED9 719 aa5.89□□□□□ -1.47
PTPN13-209ENST00000511467 IFT57Q9NWB7 429 aa5.89□□□□□ -1.47
PTPN13-209ENST00000511467 PREX1Q8TCU6 1659 aa5.89□□□□□ -1.47
PTPN13-209ENST00000511467 GLT8D2Q9H1C3 349 aa5.89□□□□□ -1.47
PTPN13-209ENST00000511467 KCNG1Q9UIX4 513 aa5.89□□□□□ -1.47
PTPN13-209ENST00000511467 ARHGAP31Q2M1Z3 1444 aa5.89□□□□□ -1.47
PTPN13-209ENST00000511467 KDM6BO15054 1643 aa5.89□□□□□ -1.47
PTPN13-209ENST00000511467 LRRC27Q9C0I9 530 aa5.89□□□□□ -1.47
PTPN13-209ENST00000511467 DEF6Q9H4E7 631 aa5.89□□□□□ -1.47
PTPN13-209ENST00000511467 PDZRN3Q9UPQ7 1066 aa5.89□□□□□ -1.47
PTPN13-209ENST00000511467 MYH15Q9Y2K3 1946 aa5.89□□□□□ -1.47
PTPN13-209ENST00000511467 RAB34Q9BZG1 259 aa5.89□□□□□ -1.47
PTPN13-209ENST00000511467 CTDP1Q9Y5B0 961 aaPredicted RBP5.89□□□□□ -1.47
PTPN13-209ENST00000511467 POLR3GO15318 223 aaPredicted RBP5.89□□□□□ -1.47
PTPN13-209ENST00000511467 ANKRD18AQ8IVF6 992 aa5.89□□□□□ -1.47
PTPN13-209ENST00000511467 HYPKQ9NX55 129 aa5.89□□□□□ -1.47
PTPN13-209ENST00000511467 CDK12Q9NYV4 1490 aaPredicted RBP5.89□□□□□ -1.47
PTPN13-209ENST00000511467 DCTN1Q14203 1278 aa5.89□□□□□ -1.47
PTPN13-209ENST00000511467 ARHGAP45Q92619 1136 aa5.89□□□□□ -1.47
PTPN13-209ENST00000511467 ZSCAN31Q96LW9 406 aaPredicted RBP5.89□□□□□ -1.47
PTPN13-209ENST00000511467 ARGLU1Q9NWB6 273 aaPredicted RBP5.89□□□□□ -1.47
PTPN13-209ENST00000511467 MYO5BQ9ULV0 1848 aa5.89□□□□□ -1.47
PTPN13-209ENST00000511467 ST20-MTHFSA0A0A6YYL1 179 aa5.88□□□□□ -1.47
PTPN13-209ENST00000511467 HOXB7P09629 217 aa5.88□□□□□ -1.47
PTPN13-209ENST00000511467 IFIT2P09913 472 aaKnown RBP5.88□□□□□ -1.47
PTPN13-209ENST00000511467 TEX35Q5T0J7 233 aa5.88□□□□□ -1.47
PTPN13-209ENST00000511467 CLTCL1P53675 1640 aa5.88□□□□□ -1.47
PTPN13-209ENST00000511467 SF3A1Q15459 793 aaKnown RBP5.88□□□□□ -1.47
PTPN13-209ENST00000511467 CC2D1BQ5T0F9 858 aaKnown RBP5.88□□□□□ -1.47
PTPN13-209ENST00000511467 KANK4Q5T7N3 995 aaPredicted RBP5.88□□□□□ -1.47
PTPN13-209ENST00000511467 FRAT1Q92837 279 aaPredicted RBP5.88□□□□□ -1.47
PTPN13-209ENST00000511467 SF3B2Q13435 895 aaKnown RBP5.88□□□□□ -1.47
PTPN13-209ENST00000511467 TTF1Q15361 905 aaPredicted RBP5.88□□□□□ -1.47
PTPN13-209ENST00000511467 ATL3Q6DD88 541 aa5.88□□□□□ -1.47
PTPN13-209ENST00000511467 MCTP2Q6DN12 878 aa5.88□□□□□ -1.47
PTPN13-209ENST00000511467 SMARCE1Q969G3 411 aa5.88□□□□□ -1.47
PTPN13-209ENST00000511467 TAOK2Q9UL54 1235 aa5.88□□□□□ -1.47
PTPN13-209ENST00000511467 GNAI2P04899 355 aa5.88□□□□□ -1.47
PTPN13-209ENST00000511467 RRP1P56182 461 aaKnown RBP5.88□□□□□ -1.47
PTPN13-209ENST00000511467 DRC7Q8IY82 874 aa5.88□□□□□ -1.47
PTPN13-209ENST00000511467 CCDC12Q8WUD4 166 aaPredicted RBP5.88□□□□□ -1.47
PTPN13-209ENST00000511467 IFT172Q9UG01 1749 aa5.88□□□□□ -1.47
PTPN13-209ENST00000511467 NPATQ14207 1427 aa5.88□□□□□ -1.47
PTPN13-209ENST00000511467 CARMIL3Q8ND23 1372 aa5.88□□□□□ -1.47
PTPN13-209ENST00000511467 NOC3LQ8WTT2 800 aaKnown RBP5.88□□□□□ -1.47
PTPN13-209ENST00000511467 RGS12O14924 1447 aa5.88□□□□□ -1.47
PTPN13-209ENST00000511467 CTAGE5O15320 804 aa5.88□□□□□ -1.47
PTPN13-209ENST00000511467 SMARCC1Q92922 1105 aaPredicted RBP5.88□□□□□ -1.47
PTPN13-209ENST00000511467 PRAG1Q86YV5 1406 aa5.87□□□□□ -1.47
PTPN13-209ENST00000511467 TUBBP07437 444 aa5.87□□□□□ -1.47
PTPN13-209ENST00000511467 UBE2Q2Q8WVN8 375 aa5.87□□□□□ -1.47
PTPN13-209ENST00000511467 LMTK2Q8IWU2 1503 aa5.87□□□□□ -1.47
PTPN13-209ENST00000511467 DDX11Q96FC9 970 aa5.87□□□□□ -1.47
PTPN13-209ENST00000511467 PANK3Q9H999 370 aa5.87□□□□□ -1.47
PTPN13-209ENST00000511467 CLTCQ00610 1675 aaKnown RBP5.87□□□□□ -1.47
PTPN13-209ENST00000511467 NDC80O14777 642 aa5.87□□□□□ -1.47
PTPN13-209ENST00000511467 CPLX1O14810 134 aa5.87□□□□□ -1.47
PTPN13-209ENST00000511467 SPTY2D1Q68D10 685 aaPredicted RBP5.87□□□□□ -1.47
PTPN13-209ENST00000511467 RPAP2Q8IXW5 612 aaPredicted RBP5.87□□□□□ -1.47
PTPN13-209ENST00000511467 PPP1R2P41236 205 aa5.87□□□□□ -1.47
PTPN13-209ENST00000511467 RBM25P49756 843 aaKnown RBP5.87□□□□□ -1.47
PTPN13-209ENST00000511467 GRIPAP1Q4V328 841 aa5.87□□□□□ -1.47
PTPN13-209ENST00000511467 TRIM22Q8IYM9 498 aa5.87□□□□□ -1.47
PTPN13-209ENST00000511467 RBM33Q96EV2 1170 aaKnown RBP5.87□□□□□ -1.47
PTPN13-209ENST00000511467 DISP1Q96F81 1524 aa5.87□□□□□ -1.47
PTPN13-209ENST00000511467 USP5P45974 858 aa5.87□□□□□ -1.47
PTPN13-209ENST00000511467 PDCL2Q8N4E4 241 aa5.87□□□□□ -1.47
PTPN13-209ENST00000511467 EDC4Q6P2E9 1401 aaKnown RBP5.87□□□□□ -1.47
PTPN13-209ENST00000511467 CCDC43Q96MW1 224 aaKnown RBP5.87□□□□□ -1.47
PTPN13-209ENST00000511467 PLEKHG1Q9ULL1 1385 aa5.87□□□□□ -1.47
PTPN13-209ENST00000511467 RNF41Q9H4P4 317 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms