RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 ARXQ96QS3 562 aa32.12■■■□□ 2.73
SMAD5-207ENST00000511116 FYB1O15117 783 aa32.1■■■□□ 2.73
SMAD5-207ENST00000511116 SLC16A10Q8TF71 515 aa32.1■■■□□ 2.73
SMAD5-207ENST00000511116 ZCRB1Q8TBF4 217 aaKnown RBP32.09■■■□□ 2.73
SMAD5-207ENST00000511116 PRIM1P49642 420 aaKnown RBP32.08■■■□□ 2.73
SMAD5-207ENST00000511116 TUBGCP6Q96RT7 1819 aa32.07■■■□□ 2.73
SMAD5-207ENST00000511116 USP47Q96K76 1375 aa32.07■■■□□ 2.72
SMAD5-207ENST00000511116 CGNL1Q0VF96 1302 aa32.06■■■□□ 2.72
SMAD5-207ENST00000511116 PNPLA7Q6ZV29 1317 aa32.06■■■□□ 2.72
SMAD5-207ENST00000511116 TMF1P82094 1093 aa32.06■■■□□ 2.72
SMAD5-207ENST00000511116 NBPF6Q5VWK0 638 aa32.05■■■□□ 2.72
SMAD5-207ENST00000511116 NBPF4Q96M43 638 aa32.05■■■□□ 2.72
SMAD5-207ENST00000511116 CHD4Q14839 1912 aa32.04■■■□□ 2.72
SMAD5-207ENST00000511116 RRS1Q15050 365 aaKnown RBP32.04■■■□□ 2.72
SMAD5-207ENST00000511116 GGNBP2Q9H3C7 697 aa32.03■■■□□ 2.72
SMAD5-207ENST00000511116 KIF24Q5T7B8 1368 aa32.02■■■□□ 2.72
SMAD5-207ENST00000511116 SYTL4Q96C24 671 aaPredicted RBP32.01■■■□□ 2.71
SMAD5-207ENST00000511116 INSRP06213 1382 aa32.01■■■□□ 2.71
SMAD5-207ENST00000511116 KIF20BQ96Q89 1820 aa32■■■□□ 2.71
SMAD5-207ENST00000511116 ZNF784Q8NCA9 323 aaPredicted RBP32■■■□□ 2.71
SMAD5-207ENST00000511116 KCNQ4P56696 695 aa31.99■■■□□ 2.71
SMAD5-207ENST00000511116 SMG6Q86US8 1419 aaKnown RBP31.99■■■□□ 2.71
SMAD5-207ENST00000511116 TFCP2L1Q9NZI6 479 aa31.97■■■□□ 2.71
SMAD5-207ENST00000511116 FLT4P35916 1363 aa31.96■■■□□ 2.71
SMAD5-207ENST00000511116 CDCA8Q53HL2 280 aa31.95■■■□□ 2.71
SMAD5-207ENST00000511116 USHBP1Q8N6Y0 703 aa31.95■■■□□ 2.71
SMAD5-207ENST00000511116 POLD1P28340 1107 aa31.94■■■□□ 2.7
SMAD5-207ENST00000511116 HSP90AB2PQ58FF8 381 aa31.94■■■□□ 2.7
SMAD5-207ENST00000511116 RAPGEF4Q8WZA2 1011 aa31.94■■■□□ 2.7
SMAD5-207ENST00000511116 CCNL1Q9UK58 526 aaPredicted RBP31.94■■■□□ 2.7
SMAD5-207ENST00000511116 GOLGB1Q14789 3259 aaKnown RBP31.93■■■□□ 2.7
SMAD5-207ENST00000511116 NCAPD2Q15021 1401 aa31.92■■■□□ 2.7
SMAD5-207ENST00000511116 TATP17735 454 aaPredicted RBP31.91■■■□□ 2.7
SMAD5-207ENST00000511116 CARD14Q9BXL6 1004 aa31.91■■■□□ 2.7
SMAD5-207ENST00000511116 PCDH11XQ9BZA7 1347 aa31.9■■■□□ 2.7
SMAD5-207ENST00000511116 PCDH11YQ9BZA8 1340 aa31.9■■■□□ 2.7
SMAD5-207ENST00000511116 ANKRD26Q9UPS8 1709 aa31.89■■■□□ 2.69
SMAD5-207ENST00000511116 PKD1L3Q7Z443 1732 aa31.88■■■□□ 2.69
SMAD5-207ENST00000511116 C5P01031 1676 aa31.87■■■□□ 2.69
SMAD5-207ENST00000511116 TRIM26Q12899 539 aaPredicted RBP31.87■■■□□ 2.69
SMAD5-207ENST00000511116 NSD3Q9BZ95 1437 aa31.85■■■□□ 2.69
SMAD5-207ENST00000511116 TAF1LQ8IZX4 1826 aa31.85■■■□□ 2.69
SMAD5-207ENST00000511116 CYP27B1O15528 508 aa31.85■■■□□ 2.69
SMAD5-207ENST00000511116 COL23A1Q86Y22 540 aaPredicted RBP31.85■■■□□ 2.69
SMAD5-207ENST00000511116 TOGARAM1Q9Y4F4 1720 aa31.85■■■□□ 2.69
SMAD5-207ENST00000511116 GPR162Q16538 588 aa31.83■■■□□ 2.69
SMAD5-207ENST00000511116 EMILIN1Q9Y6C2 1016 aa31.83■■■□□ 2.69
SMAD5-207ENST00000511116 HMGB2P26583 209 aaKnown RBP31.82■■■□□ 2.68
SMAD5-207ENST00000511116 PALLDQ8WX93 1383 aa31.81■■■□□ 2.68
SMAD5-207ENST00000511116 NLGN2Q8NFZ4 835 aa31.81■■■□□ 2.68
SMAD5-207ENST00000511116 TIMELESSQ9UNS1 1208 aa31.81■■■□□ 2.68
SMAD5-207ENST00000511116 ITGB4P16144 1822 aa31.81■■■□□ 2.68
SMAD5-207ENST00000511116 NKX1-1Q15270 411 aaPredicted RBP31.78■■■□□ 2.68
SMAD5-207ENST00000511116 KLHL34Q8N239 644 aa31.78■■■□□ 2.68
SMAD5-207ENST00000511116 WASHC2AQ641Q2 1341 aa31.77■■■□□ 2.68
SMAD5-207ENST00000511116 FLAD1Q8NFF5 587 aa31.76■■■□□ 2.67
SMAD5-207ENST00000511116 MPRIPQ6WCQ1 1025 aa31.75■■■□□ 2.67
SMAD5-207ENST00000511116 C4BP0C0L5 1744 aa31.75■■■□□ 2.67
SMAD5-207ENST00000511116 SMARCC1Q92922 1105 aaPredicted RBP31.74■■■□□ 2.67
SMAD5-207ENST00000511116 MAP2P11137 1827 aaKnown RBP31.73■■■□□ 2.67
SMAD5-207ENST00000511116 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.72■■■□□ 2.676e-7■□□□□ 10.6
SMAD5-207ENST00000511116 MSH5O43196 834 aa31.71■■■□□ 2.67
SMAD5-207ENST00000511116 PIGBQ92521 554 aa31.71■■■□□ 2.67
SMAD5-207ENST00000511116 UBR3Q6ZT12 1888 aa31.7■■■□□ 2.67
SMAD5-207ENST00000511116 YBX3P16989 372 aaKnown RBP eCLIP31.7■■■□□ 2.67
SMAD5-207ENST00000511116 C1QTNF8P60827 252 aa31.69■■■□□ 2.66
SMAD5-207ENST00000511116 MSL1Q68DK7 614 aa31.69■■■□□ 2.66
SMAD5-207ENST00000511116 EYA1Q99502 592 aa31.69■■■□□ 2.66
SMAD5-207ENST00000511116 SPG7Q9UQ90 795 aa31.69■■■□□ 2.66
SMAD5-207ENST00000511116 CLSPNQ9HAW4 1339 aa31.69■■■□□ 2.66
SMAD5-207ENST00000511116 PLEKHG2Q9H7P9 1386 aa31.68■■■□□ 2.66
SMAD5-207ENST00000511116 POLKQ9UBT6 870 aa31.68■■■□□ 2.66
SMAD5-207ENST00000511116 CD2APQ9Y5K6 639 aa31.68■■■□□ 2.66
SMAD5-207ENST00000511116 GRIN3BO60391 1043 aa31.67■■■□□ 2.66
SMAD5-207ENST00000511116 AMIGO3Q86WK7 504 aa31.67■■■□□ 2.66
SMAD5-207ENST00000511116 PELP1Q8IZL8 1130 aaKnown RBP31.67■■■□□ 2.66
SMAD5-207ENST00000511116 PPM1GO15355 546 aaPredicted RBP31.65■■■□□ 2.66
SMAD5-207ENST00000511116 AK7Q96M32 723 aa31.63■■■□□ 2.65
SMAD5-207ENST00000511116 LOC102724428A0A0B4J2F2 783 aa31.61■■■□□ 2.65
SMAD5-207ENST00000511116 SIK1P57059 783 aa31.61■■■□□ 2.65
SMAD5-207ENST00000511116 PHKG2P15735 406 aa31.6■■■□□ 2.65
SMAD5-207ENST00000511116 SSFA2P28290 1259 aa31.59■■■□□ 2.65
SMAD5-207ENST00000511116 IFNL2Q8IZJ0 200 aa31.59■■■□□ 2.65
SMAD5-207ENST00000511116 LINC00116Q8NCU8 138 aa31.59■■■□□ 2.65
SMAD5-207ENST00000511116 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.58■■■□□ 2.65
SMAD5-207ENST00000511116 EIF4A2Q14240 407 aaKnown RBP31.58■■■□□ 2.65
SMAD5-207ENST00000511116 TMOD3Q9NYL9 352 aa31.58■■■□□ 2.65
SMAD5-207ENST00000511116 ASAP1Q9ULH1 1129 aa31.56■■■□□ 2.64
SMAD5-207ENST00000511116 GIGYF1O75420 1035 aaPredicted RBP31.55■■■□□ 2.64
SMAD5-207ENST00000511116 IGSF1Q8N6C5 1336 aa31.54■■■□□ 2.64
SMAD5-207ENST00000511116 SENP3-EIF4A1A0A087X0R7 540 aa31.54■■■□□ 2.64
SMAD5-207ENST00000511116 ITPK1Q13572 414 aa31.54■■■□□ 2.64
SMAD5-207ENST00000511116 ZNF831Q5JPB2 1677 aa31.54■■■□□ 2.64
SMAD5-207ENST00000511116 SMIM5Q71RC9 77 aa31.53■■■□□ 2.64
SMAD5-207ENST00000511116 KDRP35968 1356 aa31.53■■■□□ 2.64
SMAD5-207ENST00000511116 PHF14O94880 888 aa31.52■■■□□ 2.64
SMAD5-207ENST00000511116 ATG3Q9NT62 314 aa31.52■■■□□ 2.64
SMAD5-207ENST00000511116 ADCY9O60503 1353 aa31.5■■■□□ 2.63
SMAD5-207ENST00000511116 ATP6V1AP38606 617 aa31.48■■■□□ 2.63
SMAD5-207ENST00000511116 ATP10DQ9P241 1426 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms