RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 CDK15Q96Q40 435 aa10.07□□□□□ -0.8
CHD1-206ENST00000511067 PCDHB11Q9Y5F2 797 aa10.07□□□□□ -0.8
CHD1-206ENST00000511067 LCE2BO14633 110 aa10.06□□□□□ -0.8
CHD1-206ENST00000511067 USP4Q13107 963 aa10.06□□□□□ -0.8
CHD1-206ENST00000511067 RC3H1Q5TC82 1133 aaKnown RBP10.06□□□□□ -0.8
CHD1-206ENST00000511067 TMEM164Q5U3C3 297 aa10.06□□□□□ -0.8
CHD1-206ENST00000511067 VASH1Q7L8A9 365 aaPredicted RBP10.06□□□□□ -0.8
CHD1-206ENST00000511067 ANKMY2Q8IV38 441 aa10.06□□□□□ -0.8
CHD1-206ENST00000511067 CDCA7Q9BWT1 371 aaPredicted RBP10.06□□□□□ -0.8
CHD1-206ENST00000511067 DNAAF2Q9NVR5 837 aaKnown RBP10.06□□□□□ -0.8
CHD1-206ENST00000511067 CLDN10P78369 228 aa10.05□□□□□ -0.8
CHD1-206ENST00000511067 INTS6LQ5JSJ4 861 aaKnown RBP10.05□□□□□ -0.8
CHD1-206ENST00000511067 SIX5Q8N196 739 aa10.05□□□□□ -0.8
CHD1-206ENST00000511067 FAM200AQ8TCP9 573 aa10.05□□□□□ -0.8
CHD1-206ENST00000511067 FAM187AA6NFU0 413 aa10.04□□□□□ -0.8
CHD1-206ENST00000511067 DGAT1O75907 488 aa10.04□□□□□ -0.8
CHD1-206ENST00000511067 GTF2IP78347 998 aa10.04□□□□□ -0.8
CHD1-206ENST00000511067 SWI5Q1ZZU3 235 aa10.03□□□□□ -0.8
CHD1-206ENST00000511067 PKD2L1Q9P0L9 805 aa10.03□□□□□ -0.8
CHD1-206ENST00000511067 WNT7AO00755 349 aa10.02□□□□□ -0.81
CHD1-206ENST00000511067 MYCP01106 439 aaPredicted RBP10.02□□□□□ -0.81
CHD1-206ENST00000511067 ZNF594Q96JF6 807 aaPredicted RBP10.02□□□□□ -0.81
CHD1-206ENST00000511067 CARNS1A5YM72 827 aa10.01□□□□□ -0.81
CHD1-206ENST00000511067 DHX9Q08211 1270 aaKnown RBP10.01□□□□□ -0.81
CHD1-206ENST00000511067 DPYDQ12882 1025 aa10.01□□□□□ -0.81
CHD1-206ENST00000511067 CLP1Q92989 425 aaKnown RBP10.01□□□□□ -0.81
CHD1-206ENST00000511067 RBM19Q9Y4C8 960 aaKnown RBP10.01□□□□□ -0.81
CHD1-206ENST00000511067 PCDHGA11Q9Y5H2 935 aa10.01□□□□□ -0.81
CHD1-206ENST00000511067 ERVH48-1M5A8F1 160 aa10□□□□□ -0.81
CHD1-206ENST00000511067 ZBTB7BO15156 539 aaPredicted RBP10□□□□□ -0.81
CHD1-206ENST00000511067 SIAH2O43255 324 aa10□□□□□ -0.81
CHD1-206ENST00000511067 DKK1O94907 266 aa10□□□□□ -0.81
CHD1-206ENST00000511067 FAM69CQ0P6D2 419 aa10□□□□□ -0.81
CHD1-206ENST00000511067 ADH1CP00326 375 aa9.99□□□□□ -0.81
CHD1-206ENST00000511067 FSHRP23945 695 aa9.99□□□□□ -0.81
CHD1-206ENST00000511067 RAB15P59190 212 aa9.99□□□□□ -0.81
CHD1-206ENST00000511067 ERVK-9P63128 1117 aa9.99□□□□□ -0.81
CHD1-206ENST00000511067 ARID5BQ14865 1188 aa9.99□□□□□ -0.81
CHD1-206ENST00000511067 CCDC102BQ68D86 513 aa9.99□□□□□ -0.81
CHD1-206ENST00000511067 CYP4X1Q8N118 509 aa9.99□□□□□ -0.81
CHD1-206ENST00000511067 KIAA1024Q9UPX6 916 aa9.99□□□□□ -0.81
CHD1-206ENST00000511067 GRM5P41594 1212 aa9.98□□□□□ -0.81
CHD1-206ENST00000511067 SEC13P55735 322 aa9.98□□□□□ -0.81
CHD1-206ENST00000511067 NR5A1Q13285 461 aa9.98□□□□□ -0.81
CHD1-206ENST00000511067 CCDC9Q9Y3X0 531 aaKnown RBP9.98□□□□□ -0.81
CHD1-206ENST00000511067 TLL2Q9Y6L7 1015 aa9.98□□□□□ -0.81
CHD1-206ENST00000511067 MYT1Q01538 1121 aa9.97□□□□□ -0.81
CHD1-206ENST00000511067 PSME1Q06323 249 aa9.97□□□□□ -0.81
CHD1-206ENST00000511067 CC2D2BQ6DHV5 1058 aa9.97□□□□□ -0.81
CHD1-206ENST00000511067 TPCN2Q8NHX9 752 aa9.97□□□□□ -0.81
CHD1-206ENST00000511067 M0R2N6 131 aa9.96□□□□□ -0.82
CHD1-206ENST00000511067 MRGPRX2Q96LB1 330 aa9.96□□□□□ -0.82
CHD1-206ENST00000511067 ESF1Q9H501 851 aaKnown RBP9.96□□□□□ -0.82
CHD1-206ENST00000511067 GNEQ9Y223 722 aaKnown RBP9.96□□□□□ -0.82
CHD1-206ENST00000511067 TTC24A2A3L6 582 aaPredicted RBP9.95□□□□□ -0.82
CHD1-206ENST00000511067 SSFA2P28290 1259 aa9.95□□□□□ -0.82
CHD1-206ENST00000511067 SCTRP47872 440 aa9.95□□□□□ -0.82
CHD1-206ENST00000511067 CCDC116Q8IYX3 515 aa9.95□□□□□ -0.82
CHD1-206ENST00000511067 TOR4AQ9NXH8 423 aa9.95□□□□□ -0.82
CHD1-206ENST00000511067 ZNF787Q6DD87 383 aa9.94□□□□□ -0.82
CHD1-206ENST00000511067 ATP2B4P23634 1241 aa9.93□□□□□ -0.82
CHD1-206ENST00000511067 C1orf216Q8TAB5 229 aa9.93□□□□□ -0.82
CHD1-206ENST00000511067 GZF1Q9H116 711 aaPredicted RBP9.93□□□□□ -0.82
CHD1-206ENST00000511067 WASLO00401 505 aaPredicted RBP9.92□□□□□ -0.82
CHD1-206ENST00000511067 PPP1R26Q5T8A7 1209 aaPredicted RBP9.92□□□□□ -0.82
CHD1-206ENST00000511067 PHLDB3Q6NSJ2 640 aa9.92□□□□□ -0.82
CHD1-206ENST00000511067 ZNF784Q8NCA9 323 aaPredicted RBP9.92□□□□□ -0.82
CHD1-206ENST00000511067 OSBPL3Q9H4L5 887 aa9.92□□□□□ -0.82
CHD1-206ENST00000511067 PGPEP1Q9NXJ5 209 aa9.92□□□□□ -0.82
CHD1-206ENST00000511067 SLAIN2Q9P270 581 aa9.92□□□□□ -0.82
CHD1-206ENST00000511067 SFI1A8K8P3 1242 aa9.91□□□□□ -0.82
CHD1-206ENST00000511067 SNIP1Q8TAD8 396 aaKnown RBP9.91□□□□□ -0.82
CHD1-206ENST00000511067 CCER1Q8TC90 406 aaPredicted RBP9.91□□□□□ -0.82
CHD1-206ENST00000511067 CYLDQ9NQC7 956 aa9.91□□□□□ -0.82
CHD1-206ENST00000511067 TMPRSS4Q9NRS4 437 aa9.91□□□□□ -0.82
CHD1-206ENST00000511067 EMILIN1Q9Y6C2 1016 aa9.91□□□□□ -0.82
CHD1-206ENST00000511067 IVNS1ABPQ9Y6Y0 642 aa9.91□□□□□ -0.82
CHD1-206ENST00000511067 TMCO4Q5TGY1 634 aa9.9□□□□□ -0.82
CHD1-206ENST00000511067 CYP2U1Q7Z449 544 aa9.9□□□□□ -0.82
CHD1-206ENST00000511067 TXNDC2Q86VQ3 553 aa9.9□□□□□ -0.82
CHD1-206ENST00000511067 LILRA1O75019 489 aa9.89□□□□□ -0.83
CHD1-206ENST00000511067 NR3C2P08235 984 aa9.89□□□□□ -0.83
CHD1-206ENST00000511067 ARID4AP29374 1257 aaPredicted RBP9.89□□□□□ -0.83
CHD1-206ENST00000511067 ST8SIA5O15466 376 aa9.88□□□□□ -0.83
CHD1-206ENST00000511067 OCLNQ16625 522 aa9.88□□□□□ -0.83
CHD1-206ENST00000511067 AAASQ9NRG9 546 aa9.88□□□□□ -0.83
CHD1-206ENST00000511067 ZNF358Q9NW07 568 aa9.88□□□□□ -0.83
CHD1-206ENST00000511067 CXXC1Q9P0U4 656 aaPredicted RBP9.88□□□□□ -0.83
CHD1-206ENST00000511067 TMEM229AB2RXF0 380 aa9.87□□□□□ -0.83
CHD1-206ENST00000511067 BACH1O14867 736 aa9.87□□□□□ -0.83
CHD1-206ENST00000511067 ALDH1A1P00352 501 aa9.87□□□□□ -0.83
CHD1-206ENST00000511067 GNRH1P01148 92 aa9.87□□□□□ -0.83
CHD1-206ENST00000511067 AVPP01185 164 aa9.87□□□□□ -0.83
CHD1-206ENST00000511067 SCNN1DP51172 638 aa9.87□□□□□ -0.83
CHD1-206ENST00000511067 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.87□□□□□ -0.83
CHD1-206ENST00000511067 MTMR7Q9Y216 660 aa9.87□□□□□ -0.83
CHD1-206ENST00000511067 WASF2Q9Y6W5 498 aa9.87□□□□□ -0.83
CHD1-206ENST00000511067 PRMT3O60678 531 aa9.86□□□□□ -0.83
CHD1-206ENST00000511067 GDF10P55107 478 aa9.86□□□□□ -0.83
CHD1-206ENST00000511067 NNTQ13423 1086 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms