RNA–Protein interactions for RNA: ENST00000510710.3

COL1A1-212, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,147 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-212ENST00000510710 ANKRD36BQ8N2N9 1353 aa20.93■□□□□ 0.94
COL1A1-212ENST00000510710 GPR162Q16538 588 aa20.92■□□□□ 0.94
COL1A1-212ENST00000510710 MAP3K5Q99683 1374 aa20.92■□□□□ 0.94
COL1A1-212ENST00000510710 RRS1Q15050 365 aaKnown RBP20.91■□□□□ 0.94
COL1A1-212ENST00000510710 PNPLA7Q6ZV29 1317 aa20.91■□□□□ 0.94
COL1A1-212ENST00000510710 CHD4Q14839 1912 aa20.9■□□□□ 0.94
COL1A1-212ENST00000510710 RGPD2P0DJD1 1756 aa20.9■□□□□ 0.94
COL1A1-212ENST00000510710 TMF1P82094 1093 aa20.89■□□□□ 0.93
COL1A1-212ENST00000510710 GGNBP2Q9H3C7 697 aa20.89■□□□□ 0.93
COL1A1-212ENST00000510710 RTL1A6NKG5 1358 aa20.88■□□□□ 0.93
COL1A1-212ENST00000510710 QSER1Q2KHR3 1735 aa20.88■□□□□ 0.93
COL1A1-212ENST00000510710 DOT1LQ8TEK3 1739 aa20.88■□□□□ 0.93
COL1A1-212ENST00000510710 FYB1O15117 783 aa20.88■□□□□ 0.93
COL1A1-212ENST00000510710 NBPF6Q5VWK0 638 aa20.88■□□□□ 0.93
COL1A1-212ENST00000510710 NBPF4Q96M43 638 aa20.88■□□□□ 0.93
COL1A1-212ENST00000510710 CCNL1Q9UK58 526 aaPredicted RBP20.88■□□□□ 0.93
COL1A1-212ENST00000510710 MEGF6O75095 1541 aa20.88■□□□□ 0.93
COL1A1-212ENST00000510710 NSD2O96028 1365 aa20.87■□□□□ 0.93
COL1A1-212ENST00000510710 CGNL1Q0VF96 1302 aa20.87■□□□□ 0.93
COL1A1-212ENST00000510710 USHBP1Q8N6Y0 703 aa20.87■□□□□ 0.93
COL1A1-212ENST00000510710 RAPGEF4Q8WZA2 1011 aa20.87■□□□□ 0.93
COL1A1-212ENST00000510710 MSH5O43196 834 aa20.86■□□□□ 0.93
COL1A1-212ENST00000510710 PELP1Q8IZL8 1130 aaKnown RBP20.86■□□□□ 0.93
COL1A1-212ENST00000510710 SMG6Q86US8 1419 aaKnown RBP20.86■□□□□ 0.93
COL1A1-212ENST00000510710 USP47Q96K76 1375 aa20.85■□□□□ 0.93
COL1A1-212ENST00000510710 CLSPNQ9HAW4 1339 aa20.85■□□□□ 0.93
COL1A1-212ENST00000510710 LY75O60449 1722 aa20.85■□□□□ 0.93
COL1A1-212ENST00000510710 SHANK3Q9BYB0 1731 aa20.85■□□□□ 0.93
COL1A1-212ENST00000510710 TATP17735 454 aaPredicted RBP20.84■□□□□ 0.93
COL1A1-212ENST00000510710 TUBGCP6Q96RT7 1819 aa20.83■□□□□ 0.92
COL1A1-212ENST00000510710 UTRNP46939 3433 aa20.82■□□□□ 0.92
COL1A1-212ENST00000510710 HSP90AB2PQ58FF8 381 aa20.82■□□□□ 0.92
COL1A1-212ENST00000510710 CCER1Q8TC90 406 aaPredicted RBP20.82■□□□□ 0.92
COL1A1-212ENST00000510710 CDCA8Q53HL2 280 aa20.81■□□□□ 0.92
COL1A1-212ENST00000510710 COL23A1Q86Y22 540 aaPredicted RBP20.81■□□□□ 0.92
COL1A1-212ENST00000510710 COL24A1Q17RW2 1714 aa20.81■□□□□ 0.92
COL1A1-212ENST00000510710 NLGN2Q8NFZ4 835 aa20.8■□□□□ 0.92
COL1A1-212ENST00000510710 INSRP06213 1382 aa20.8■□□□□ 0.92
COL1A1-212ENST00000510710 PCDH11XQ9BZA7 1347 aa20.79■□□□□ 0.92
COL1A1-212ENST00000510710 PCDH11YQ9BZA8 1340 aa20.79■□□□□ 0.92
COL1A1-212ENST00000510710 HMGB2P26583 209 aaKnown RBP20.79■□□□□ 0.92
COL1A1-212ENST00000510710 FLT4P35916 1363 aa20.78■□□□□ 0.92
COL1A1-212ENST00000510710 C1QTNF8P60827 252 aa20.78■□□□□ 0.92
COL1A1-212ENST00000510710 MPRIPQ6WCQ1 1025 aa20.78■□□□□ 0.92
COL1A1-212ENST00000510710 KIF24Q5T7B8 1368 aa20.76■□□□□ 0.91
COL1A1-212ENST00000510710 MSL1Q68DK7 614 aa20.76■□□□□ 0.91
COL1A1-212ENST00000510710 KIF20BQ96Q89 1820 aa20.76■□□□□ 0.91
COL1A1-212ENST00000510710 SENP3-EIF4A1A0A087X0R7 540 aa20.75■□□□□ 0.91
COL1A1-212ENST00000510710 PALLDQ8WX93 1383 aa20.74■□□□□ 0.91
COL1A1-212ENST00000510710 GRIN3BO60391 1043 aa20.74■□□□□ 0.91
COL1A1-212ENST00000510710 FLAD1Q8NFF5 587 aa20.74■□□□□ 0.91
COL1A1-212ENST00000510710 PPM1GO15355 546 aaPredicted RBP20.73■□□□□ 0.91
COL1A1-212ENST00000510710 CYP27B1O15528 508 aa20.73■□□□□ 0.91
COL1A1-212ENST00000510710 CARD14Q9BXL6 1004 aa20.73■□□□□ 0.91
COL1A1-212ENST00000510710 EMILIN1Q9Y6C2 1016 aa20.73■□□□□ 0.91
COL1A1-212ENST00000510710 SMARCC1Q92922 1105 aaPredicted RBP20.72■□□□□ 0.91
COL1A1-212ENST00000510710 C5P01031 1676 aa20.72■□□□□ 0.91
COL1A1-212ENST00000510710 GIGYF1O75420 1035 aaPredicted RBP20.71■□□□□ 0.91
COL1A1-212ENST00000510710 YBX3P16989 372 aaKnown RBP eCLIP20.71■□□□□ 0.91
COL1A1-212ENST00000510710 NSD3Q9BZ95 1437 aa20.7■□□□□ 0.9
COL1A1-212ENST00000510710 AK7Q96M32 723 aa20.69■□□□□ 0.9
COL1A1-212ENST00000510710 SPG7Q9UQ90 795 aa20.69■□□□□ 0.9
COL1A1-212ENST00000510710 CD2APQ9Y5K6 639 aa20.69■□□□□ 0.9
COL1A1-212ENST00000510710 PIGBQ92521 554 aa20.68■□□□□ 0.9
COL1A1-212ENST00000510710 TAF1LQ8IZX4 1826 aa20.67■□□□□ 0.9
COL1A1-212ENST00000510710 ITGB4P16144 1822 aa20.67■□□□□ 0.9
COL1A1-212ENST00000510710 NKX1-1Q15270 411 aaPredicted RBP20.66■□□□□ 0.9
COL1A1-212ENST00000510710 C4BP0C0L5 1744 aa20.65■□□□□ 0.9
COL1A1-212ENST00000510710 WASHC2AQ641Q2 1341 aa20.65■□□□□ 0.9
COL1A1-212ENST00000510710 PHF14O94880 888 aa20.65■□□□□ 0.9
COL1A1-212ENST00000510710 PKD1L3Q7Z443 1732 aa20.64■□□□□ 0.9
COL1A1-212ENST00000510710 TOGARAM1Q9Y4F4 1720 aa20.64■□□□□ 0.9
COL1A1-212ENST00000510710 EYA1Q99502 592 aa20.64■□□□□ 0.89
COL1A1-212ENST00000510710 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.63■□□□□ 0.89
COL1A1-212ENST00000510710 TMOD3Q9NYL9 352 aa20.63■□□□□ 0.89
COL1A1-212ENST00000510710 NCAPD2Q15021 1401 aa20.62■□□□□ 0.89
COL1A1-212ENST00000510710 LOC102724428A0A0B4J2F2 783 aa20.62■□□□□ 0.89
COL1A1-212ENST00000510710 SIK1P57059 783 aa20.62■□□□□ 0.89
COL1A1-212ENST00000510710 SMIM5Q71RC9 77 aa20.62■□□□□ 0.89
COL1A1-212ENST00000510710 AMIGO3Q86WK7 504 aa20.62■□□□□ 0.89
COL1A1-212ENST00000510710 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.62■□□□□ 0.89
COL1A1-212ENST00000510710 MAP2P11137 1827 aaKnown RBP20.62■□□□□ 0.89
COL1A1-212ENST00000510710 IFNL2Q8IZJ0 200 aa20.61■□□□□ 0.89
COL1A1-212ENST00000510710 POLR3GLQ9BT43 218 aa20.61■□□□□ 0.89
COL1A1-212ENST00000510710 POLKQ9UBT6 870 aa20.61■□□□□ 0.89
COL1A1-212ENST00000510710 GOLGB1Q14789 3259 aaKnown RBP20.6■□□□□ 0.89
COL1A1-212ENST00000510710 SSFA2P28290 1259 aa20.6■□□□□ 0.89
COL1A1-212ENST00000510710 LINC00116Q8NCU8 138 aa20.6■□□□□ 0.89
COL1A1-212ENST00000510710 TIMELESSQ9UNS1 1208 aa20.6■□□□□ 0.89
COL1A1-212ENST00000510710 PHKG2P15735 406 aa20.59■□□□□ 0.89
COL1A1-212ENST00000510710 ATP6V1AP38606 617 aa20.59■□□□□ 0.89
COL1A1-212ENST00000510710 ASAP1Q9ULH1 1129 aa20.59■□□□□ 0.89
COL1A1-212ENST00000510710 ANKRD26Q9UPS8 1709 aa20.58■□□□□ 0.89
COL1A1-212ENST00000510710 UBR3Q6ZT12 1888 aa20.58■□□□□ 0.89
COL1A1-212ENST00000510710 TNNT2P45379 298 aaPredicted RBP20.58■□□□□ 0.89
COL1A1-212ENST00000510710 GNPATO15228 680 aa20.57■□□□□ 0.88
COL1A1-212ENST00000510710 ATP10DQ9P241 1426 aa20.57■□□□□ 0.88
COL1A1-212ENST00000510710 IGSF1Q8N6C5 1336 aa20.56■□□□□ 0.88
COL1A1-212ENST00000510710 ITPK1Q13572 414 aa20.56■□□□□ 0.88
COL1A1-212ENST00000510710 EIF4A2Q14240 407 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms