RNA–Protein interactions for RNA: ENST00000510281.1

TRIO-215, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-215ENST00000510281 FBLN1P23142 703 aa27.87■■■□□ 2.05
TRIO-215ENST00000510281 GGNBP2Q9H3C7 697 aa27.87■■■□□ 2.05
TRIO-215ENST00000510281 FYB1O15117 783 aa27.86■■■□□ 2.05
TRIO-215ENST00000510281 CARD14Q9BXL6 1004 aa27.86■■■□□ 2.05
TRIO-215ENST00000510281 FAM208AQ9UK61 1670 aaKnown RBP27.86■■■□□ 2.05
TRIO-215ENST00000510281 QSER1Q2KHR3 1735 aa27.85■■■□□ 2.05
TRIO-215ENST00000510281 DDX54Q8TDD1 881 aaKnown RBP27.85■■■□□ 2.05
TRIO-215ENST00000510281 KIF20BQ96Q89 1820 aa27.83■■■□□ 2.05
TRIO-215ENST00000510281 CHD4Q14839 1912 aa27.82■■■□□ 2.04
TRIO-215ENST00000510281 GOLGB1Q14789 3259 aaKnown RBP27.82■■■□□ 2.04
TRIO-215ENST00000510281 COL24A1Q17RW2 1714 aa27.82■■■□□ 2.04
TRIO-215ENST00000510281 MAP3K19Q56UN5 1328 aa27.82■■■□□ 2.04
TRIO-215ENST00000510281 PNPLA7Q6ZV29 1317 aa27.82■■■□□ 2.04
TRIO-215ENST00000510281 LTV1Q96GA3 475 aaPredicted RBP27.8■■■□□ 2.04
TRIO-215ENST00000510281 NSD2O96028 1365 aa27.8■■■□□ 2.04
TRIO-215ENST00000510281 POLD1P28340 1107 aa27.79■■■□□ 2.04
TRIO-215ENST00000510281 HOXC9P31274 260 aa27.79■■■□□ 2.04
TRIO-215ENST00000510281 PRIM1P49642 420 aaKnown RBP27.78■■■□□ 2.04
TRIO-215ENST00000510281 RRS1Q15050 365 aaKnown RBP27.78■■■□□ 2.04
TRIO-215ENST00000510281 KAT6BQ8WYB5 2073 aa27.76■■■□□ 2.03
TRIO-215ENST00000510281 GPR162Q16538 588 aa27.76■■■□□ 2.03
TRIO-215ENST00000510281 TFCP2L1Q9NZI6 479 aa27.76■■■□□ 2.03
TRIO-215ENST00000510281 C1QTNF8P60827 252 aa27.75■■■□□ 2.03
TRIO-215ENST00000510281 ZCRB1Q8TBF4 217 aaKnown RBP27.75■■■□□ 2.03
TRIO-215ENST00000510281 SYTL4Q96C24 671 aaPredicted RBP27.75■■■□□ 2.03
TRIO-215ENST00000510281 MEGF6O75095 1541 aa27.75■■■□□ 2.03
TRIO-215ENST00000510281 AMPHP49418 695 aa27.74■■■□□ 2.03
TRIO-215ENST00000510281 LY75O60449 1722 aa27.74■■■□□ 2.03
TRIO-215ENST00000510281 RTL1A6NKG5 1358 aa27.73■■■□□ 2.03
TRIO-215ENST00000510281 DOT1LQ8TEK3 1739 aa27.73■■■□□ 2.03
TRIO-215ENST00000510281 KCNQ4P56696 695 aa27.73■■■□□ 2.03
TRIO-215ENST00000510281 SHANK3Q9BYB0 1731 aa27.72■■■□□ 2.03
TRIO-215ENST00000510281 TUBGCP6Q96RT7 1819 aa27.71■■■□□ 2.03
TRIO-215ENST00000510281 KLHL34Q8N239 644 aa27.7■■■□□ 2.02
TRIO-215ENST00000510281 CGNL1Q0VF96 1302 aa27.69■■■□□ 2.02
TRIO-215ENST00000510281 PIAS4Q8N2W9 510 aaPredicted RBP27.69■■■□□ 2.02
TRIO-215ENST00000510281 CCNL1Q9UK58 526 aaPredicted RBP27.69■■■□□ 2.02
TRIO-215ENST00000510281 SENP3-EIF4A1A0A087X0R7 540 aa27.68■■■□□ 2.02
TRIO-215ENST00000510281 NLGN2Q8NFZ4 835 aa27.68■■■□□ 2.02
TRIO-215ENST00000510281 PANK3Q9H999 370 aa27.68■■■□□ 2.02
TRIO-215ENST00000510281 NBPF6Q5VWK0 638 aa27.67■■■□□ 2.02
TRIO-215ENST00000510281 NBPF4Q96M43 638 aa27.67■■■□□ 2.02
TRIO-215ENST00000510281 RGPD2P0DJD1 1756 aa27.65■■■□□ 2.02
TRIO-215ENST00000510281 KIF7Q2M1P5 1343 aa27.65■■■□□ 2.02
TRIO-215ENST00000510281 COL23A1Q86Y22 540 aaPredicted RBP27.64■■■□□ 2.02
TRIO-215ENST00000510281 EMILIN1Q9Y6C2 1016 aa27.64■■■□□ 2.02
TRIO-215ENST00000510281 HSP90AB2PQ58FF8 381 aa27.63■■■□□ 2.01
TRIO-215ENST00000510281 FLT4P35916 1363 aa27.62■■■□□ 2.01
TRIO-215ENST00000510281 PELP1Q8IZL8 1130 aaKnown RBP27.62■■■□□ 2.01
TRIO-215ENST00000510281 SMG6Q86US8 1419 aaKnown RBP27.61■■■□□ 2.01
TRIO-215ENST00000510281 GIGYF1O75420 1035 aaPredicted RBP27.61■■■□□ 2.01
TRIO-215ENST00000510281 RAPGEF4Q8WZA2 1011 aa27.61■■■□□ 2.01
TRIO-215ENST00000510281 ANKRD26Q9UPS8 1709 aa27.61■■■□□ 2.01
TRIO-215ENST00000510281 GRIN3BO60391 1043 aa27.6■■■□□ 2.01
TRIO-215ENST00000510281 INSRP06213 1382 aa27.6■■■□□ 2.01
TRIO-215ENST00000510281 YBX3P16989 372 aaKnown RBP eCLIP27.59■■■□□ 2.01
TRIO-215ENST00000510281 HMGB2P26583 209 aaKnown RBP27.59■■■□□ 2.01
TRIO-215ENST00000510281 USHBP1Q8N6Y0 703 aa27.59■■■□□ 2.01
TRIO-215ENST00000510281 KIF24Q5T7B8 1368 aa27.58■■■□□ 2.01
TRIO-215ENST00000510281 TATP17735 454 aaPredicted RBP27.57■■■□□ 2
TRIO-215ENST00000510281 TNNT2P45379 298 aaPredicted RBP27.57■■■□□ 2
TRIO-215ENST00000510281 PCDH11XQ9BZA7 1347 aa27.57■■■□□ 2
TRIO-215ENST00000510281 PCDH11YQ9BZA8 1340 aa27.57■■■□□ 2
TRIO-215ENST00000510281 PPM1GO15355 546 aaPredicted RBP27.56■■■□□ 2
TRIO-215ENST00000510281 MSH5O43196 834 aa27.56■■■□□ 2
TRIO-215ENST00000510281 FLAD1Q8NFF5 587 aa27.54■■■□□ 2
TRIO-215ENST00000510281 PALLDQ8WX93 1383 aa27.54■■■□□ 2
TRIO-215ENST00000510281 C5P01031 1676 aa27.53■■■□□ 2
TRIO-215ENST00000510281 MSL1Q68DK7 614 aa27.53■■■□□ 2
TRIO-215ENST00000510281 POLKQ9UBT6 870 aa27.53■■■□□ 2
TRIO-215ENST00000510281 CD2APQ9Y5K6 639 aa27.53■■■□□ 2
TRIO-215ENST00000510281 CEP350Q5VT06 3117 aa27.51■■□□□ 1.99
TRIO-215ENST00000510281 CYP27B1O15528 508 aa27.5■■□□□ 1.99
TRIO-215ENST00000510281 MAP2P11137 1827 aaKnown RBP27.49■■□□□ 1.99
TRIO-215ENST00000510281 WASHC2AQ641Q2 1341 aa27.48■■□□□ 1.99
TRIO-215ENST00000510281 MPRIPQ6WCQ1 1025 aa27.48■■□□□ 1.99
TRIO-215ENST00000510281 NCAPD2Q15021 1401 aa27.48■■□□□ 1.99
TRIO-215ENST00000510281 SMARCC1Q92922 1105 aaPredicted RBP27.47■■□□□ 1.99
TRIO-215ENST00000510281 KNSTRNQ9Y448 316 aa27.47■■□□□ 1.99
TRIO-215ENST00000510281 TAF1LQ8IZX4 1826 aa27.46■■□□□ 1.99
TRIO-215ENST00000510281 TOGARAM1Q9Y4F4 1720 aa27.45■■□□□ 1.99
TRIO-215ENST00000510281 ATP10DQ9P241 1426 aa27.45■■□□□ 1.98
TRIO-215ENST00000510281 AMER1Q5JTC6 1135 aaPredicted RBP27.45■■□□□ 1.98
TRIO-215ENST00000510281 C4BP0C0L5 1744 aa27.44■■□□□ 1.98
TRIO-215ENST00000510281 NKX1-1Q15270 411 aaPredicted RBP27.44■■□□□ 1.98
TRIO-215ENST00000510281 MORC1Q86VD1 984 aa27.44■■□□□ 1.98
TRIO-215ENST00000510281 PKD1L3Q7Z443 1732 aa27.44■■□□□ 1.98
TRIO-215ENST00000510281 AMIGO3Q86WK7 504 aa27.43■■□□□ 1.98
TRIO-215ENST00000510281 PIGBQ92521 554 aa27.42■■□□□ 1.98
TRIO-215ENST00000510281 AK7Q96M32 723 aa27.42■■□□□ 1.98
TRIO-215ENST00000510281 ADCY9O60503 1353 aa27.42■■□□□ 1.98
TRIO-215ENST00000510281 EYA1Q99502 592 aa27.41■■□□□ 1.98
TRIO-215ENST00000510281 EIF4A2Q14240 407 aaKnown RBP27.4■■□□□ 1.98
TRIO-215ENST00000510281 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.38■■□□□ 1.97
TRIO-215ENST00000510281 PER1O15534 1290 aaPredicted RBP27.38■■□□□ 1.97
TRIO-215ENST00000510281 ITGB4P16144 1822 aa27.38■■□□□ 1.97
TRIO-215ENST00000510281 SSFA2P28290 1259 aa27.37■■□□□ 1.97
TRIO-215ENST00000510281 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.37■■□□□ 1.973e-6■■□□□ 13.7
TRIO-215ENST00000510281 SPG7Q9UQ90 795 aa27.37■■□□□ 1.97
TRIO-215ENST00000510281 UBR3Q6ZT12 1888 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms