RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-231ENST00000510245 PRDM15P57071 1507 aaPredicted RBP12.38□□□□□ -0.43
CAST-231ENST00000510245 C14orf37Q86TY3 774 aa12.38□□□□□ -0.43
CAST-231ENST00000510245 DDRGK1Q96HY6 314 aa12.38□□□□□ -0.43
CAST-231ENST00000510245 SCUBE3Q8IX30 993 aa12.37□□□□□ -0.43
CAST-231ENST00000510245 NKX2-3Q8TAU0 364 aa12.37□□□□□ -0.43
CAST-231ENST00000510245 NWD1Q149M9 1564 aa12.36□□□□□ -0.43
CAST-231ENST00000510245 PLEKHH2Q8IVE3 1493 aa12.36□□□□□ -0.43
CAST-231ENST00000510245 MORN1Q5T089 497 aa12.36□□□□□ -0.43
CAST-231ENST00000510245 BEGAINQ9BUH8 593 aa12.36□□□□□ -0.43
CAST-231ENST00000510245 ABCC3O15438 1527 aa12.36□□□□□ -0.43
CAST-231ENST00000510245 KIAA1107Q9UPP5 1409 aa12.36□□□□□ -0.43
CAST-231ENST00000510245 NKTRP30414 1462 aaKnown RBP12.35□□□□□ -0.43
CAST-231ENST00000510245 DHX29Q7Z478 1369 aaKnown RBP12.35□□□□□ -0.43
CAST-231ENST00000510245 SENP3-EIF4A1A0A087X0R7 540 aa12.35□□□□□ -0.43
CAST-231ENST00000510245 NCOA2Q15596 1464 aa12.34□□□□□ -0.43
CAST-231ENST00000510245 AHDC1Q5TGY3 1603 aaPredicted RBP12.34□□□□□ -0.43
CAST-231ENST00000510245 TLL1O43897 1013 aa12.34□□□□□ -0.43
CAST-231ENST00000510245 ARHGAP23Q9P227 1491 aa12.34□□□□□ -0.43
CAST-231ENST00000510245 SLIT1O75093 1534 aa12.33□□□□□ -0.44
CAST-231ENST00000510245 A0A0G2JS52 829 aa12.33□□□□□ -0.44
CAST-231ENST00000510245 USP46P62068 366 aa12.33□□□□□ -0.44
CAST-231ENST00000510245 SLC27A5Q9Y2P5 690 aa12.33□□□□□ -0.44
CAST-231ENST00000510245 CDC42BPAQ5VT25 1732 aa12.32□□□□□ -0.44
CAST-231ENST00000510245 NHSL1Q5SYE7 1610 aa12.32□□□□□ -0.44
CAST-231ENST00000510245 SPIRE2Q8WWL2 714 aa12.31□□□□□ -0.44
CAST-231ENST00000510245 ERVK-7P63135 1459 aa12.31□□□□□ -0.44
CAST-231ENST00000510245 UBR1Q8IWV7 1749 aa12.31□□□□□ -0.44
CAST-231ENST00000510245 HOXA2O43364 376 aa12.3□□□□□ -0.44
CAST-231ENST00000510245 HLA-CQ95604 372 aa12.3□□□□□ -0.44
CAST-231ENST00000510245 SLC26A8Q96RN1 970 aa12.3□□□□□ -0.44
CAST-231ENST00000510245 HRCP23327 699 aa12.29□□□□□ -0.44
CAST-231ENST00000510245 CFDP1Q9UEE9 299 aaPredicted RBP12.29□□□□□ -0.44
CAST-231ENST00000510245 KDM5AP29375 1690 aaKnown RBP12.29□□□□□ -0.44
CAST-231ENST00000510245 BLMP54132 1417 aaPredicted RBP12.28□□□□□ -0.44
CAST-231ENST00000510245 DIP2AQ14689 1571 aa12.28□□□□□ -0.44
CAST-231ENST00000510245 FMNL1O95466 1100 aaPredicted RBP12.28□□□□□ -0.44
CAST-231ENST00000510245 GUCA2AQ02747 115 aa12.28□□□□□ -0.44
CAST-231ENST00000510245 SF3B2Q13435 895 aaKnown RBP12.28□□□□□ -0.44
CAST-231ENST00000510245 PPP1R18Q6NYC8 613 aa12.28□□□□□ -0.44
CAST-231ENST00000510245 SPSB2Q99619 263 aa12.28□□□□□ -0.44
CAST-231ENST00000510245 TRPC5Q9UL62 973 aaPredicted RBP12.28□□□□□ -0.44
CAST-231ENST00000510245 RTEL1-TNFRSF6BF6WH68 1400 aa12.28□□□□□ -0.44
CAST-231ENST00000510245 GPATCH8Q9UKJ3 1502 aaKnown RBP12.27□□□□□ -0.44
CAST-231ENST00000510245 ADH1BP00325 375 aa12.27□□□□□ -0.45
CAST-231ENST00000510245 DEFB132Q7Z7B7 95 aa12.27□□□□□ -0.45
CAST-231ENST00000510245 ADAMTS2O95450 1211 aa12.26□□□□□ -0.45
CAST-231ENST00000510245 ATF3P18847 181 aa12.26□□□□□ -0.45
CAST-231ENST00000510245 GGCXP38435 758 aa12.26□□□□□ -0.45
CAST-231ENST00000510245 TBC1D2Q9BYX2 928 aa12.26□□□□□ -0.45
CAST-231ENST00000510245 USP21Q9UK80 565 aa12.26□□□□□ -0.45
CAST-231ENST00000510245 TMEM2Q9UHN6 1383 aa12.26□□□□□ -0.45
CAST-231ENST00000510245 NDUFV2P19404 249 aa12.25□□□□□ -0.45
CAST-231ENST00000510245 Q3C1V9 767 aa12.25□□□□□ -0.45
CAST-231ENST00000510245 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.25□□□□□ -0.45
CAST-231ENST00000510245 CCDC18Q5T9S5 1454 aa12.25□□□□□ -0.45
CAST-231ENST00000510245 MOXD2PA6NHM9 499 aa12.24□□□□□ -0.45
CAST-231ENST00000510245 DIXDC1Q155Q3 683 aa12.24□□□□□ -0.45
CAST-231ENST00000510245 RNF19BQ6ZMZ0 732 aa12.24□□□□□ -0.45
CAST-231ENST00000510245 ERICH6Q7L0X2 663 aa12.24□□□□□ -0.45
CAST-231ENST00000510245 SLC6A16Q9GZN6 736 aa12.24□□□□□ -0.45
CAST-231ENST00000510245 EP400Q96L91 3159 aa12.23□□□□□ -0.45
CAST-231ENST00000510245 SETD5Q9C0A6 1442 aa12.23□□□□□ -0.45
CAST-231ENST00000510245 S1PR4O95977 384 aa12.23□□□□□ -0.45
CAST-231ENST00000510245 FDX1P10109 184 aa12.23□□□□□ -0.45
CAST-231ENST00000510245 BRICD5Q6PL45 260 aa12.23□□□□□ -0.45
CAST-231ENST00000510245 BRINP3Q76B58 766 aa12.23□□□□□ -0.45
CAST-231ENST00000510245 LRRC59Q96AG4 307 aaKnown RBP12.23□□□□□ -0.45
CAST-231ENST00000510245 THAP11Q96EK4 314 aa12.23□□□□□ -0.45
CAST-231ENST00000510245 SALL2Q9Y467 1007 aaPredicted RBP12.22□□□□□ -0.45
CAST-231ENST00000510245 CCNB3Q8WWL7 1395 aa12.21□□□□□ -0.45
CAST-231ENST00000510245 LRRIQ1Q96JM4 1722 aa12.21□□□□□ -0.45
CAST-231ENST00000510245 BCL9LQ86UU0 1499 aa12.21□□□□□ -0.46
CAST-231ENST00000510245 NCOA3Q9Y6Q9 1424 aa12.2□□□□□ -0.46
CAST-231ENST00000510245 PNPLA6Q8IY17 1366 aa12.2□□□□□ -0.46
CAST-231ENST00000510245 PPEF1O14829 653 aaPredicted RBP12.2□□□□□ -0.46
CAST-231ENST00000510245 SYMPKQ92797 1274 aaKnown RBP12.2□□□□□ -0.46
CAST-231ENST00000510245 MAST1Q9Y2H9 1570 aa12.2□□□□□ -0.46
CAST-231ENST00000510245 ATRNO75882 1429 aa12.2□□□□□ -0.46
CAST-231ENST00000510245 TET3O43151 1660 aa12.19□□□□□ -0.46
CAST-231ENST00000510245 C19orf44Q9H6X5 657 aa12.19□□□□□ -0.46
CAST-231ENST00000510245 C6orf229H3BNL8 230 aa12.18□□□□□ -0.46
CAST-231ENST00000510245 SH3D19Q5HYK7 790 aa12.18□□□□□ -0.46
CAST-231ENST00000510245 FAM160A2Q8N612 972 aaPredicted RBP12.18□□□□□ -0.46
CAST-231ENST00000510245 GOPCQ9HD26 462 aa12.18□□□□□ -0.46
CAST-231ENST00000510245 PCDHGC3Q9UN70 934 aa12.18□□□□□ -0.46
CAST-231ENST00000510245 CAMSAP2Q08AD1 1489 aa12.18□□□□□ -0.46
CAST-231ENST00000510245 ARHGAP35Q9NRY4 1499 aa12.18□□□□□ -0.46
CAST-231ENST00000510245 ASXL1Q8IXJ9 1541 aa12.17□□□□□ -0.46
CAST-231ENST00000510245 ZNF644Q9H582 1327 aaPredicted RBP12.17□□□□□ -0.46
CAST-231ENST00000510245 MBD5Q9P267 1494 aa12.17□□□□□ -0.46
CAST-231ENST00000510245 RNF223E7ERA6 249 aa12.17□□□□□ -0.46
CAST-231ENST00000510245 RIC3Q7Z5B4 369 aa12.17□□□□□ -0.46
CAST-231ENST00000510245 PCMTD1Q96MG8 357 aaPredicted RBP12.17□□□□□ -0.46
CAST-231ENST00000510245 USB1Q9BQ65 265 aaKnown RBP12.17□□□□□ -0.46
CAST-231ENST00000510245 MROH1Q8NDA8 1641 aa12.16□□□□□ -0.46
CAST-231ENST00000510245 C1QTNF8P60827 252 aa12.16□□□□□ -0.46
CAST-231ENST00000510245 RSBN1LQ6PCB5 846 aaPredicted RBP12.16□□□□□ -0.46
CAST-231ENST00000510245 PRDM9Q9NQV7 894 aa12.16□□□□□ -0.46
CAST-231ENST00000510245 POLR3EQ9NVU0 708 aa12.16□□□□□ -0.46
CAST-231ENST00000510245 EFCAB6Q5THR3 1501 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms