RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 HOXC9P31274 260 aa14.58□□□□□ -0.08
MBD4-208ENST00000509828 IFFO2Q5TF58 517 aa14.58□□□□□ -0.08
MBD4-208ENST00000509828 COL23A1Q86Y22 540 aaPredicted RBP14.58□□□□□ -0.08
MBD4-208ENST00000509828 RAPGEF4Q8WZA2 1011 aa14.58□□□□□ -0.08
MBD4-208ENST00000509828 YBX3P16989 372 aaKnown RBP eCLIP14.57□□□□□ -0.081e-7■□□□□ 10.3
MBD4-208ENST00000509828 GPBP1L1Q9HC44 474 aaPredicted RBP14.57□□□□□ -0.08
MBD4-208ENST00000509828 MON2Q7Z3U7 1717 aa14.56□□□□□ -0.08
MBD4-208ENST00000509828 FLAD1Q8NFF5 587 aa14.56□□□□□ -0.08
MBD4-208ENST00000509828 MAP3K19Q56UN5 1328 aa14.56□□□□□ -0.08
MBD4-208ENST00000509828 A0A1W2PP64 1363 aa14.56□□□□□ -0.08
MBD4-208ENST00000509828 LTN1O94822 1766 aa14.55□□□□□ -0.08
MBD4-208ENST00000509828 TATP17735 454 aaPredicted RBP14.55□□□□□ -0.08
MBD4-208ENST00000509828 FBLN1P23142 703 aa14.55□□□□□ -0.08
MBD4-208ENST00000509828 ZNF526Q8TF50 670 aaPredicted RBP14.55□□□□□ -0.08
MBD4-208ENST00000509828 PUS7Q96PZ0 661 aaKnown RBP14.55□□□□□ -0.08
MBD4-208ENST00000509828 CD163L1Q9NR16 1453 aa14.55□□□□□ -0.08
MBD4-208ENST00000509828 USHBP1Q8N6Y0 703 aa14.54□□□□□ -0.08
MBD4-208ENST00000509828 CD2APQ9Y5K6 639 aa14.54□□□□□ -0.08
MBD4-208ENST00000509828 SLC24A1O60721 1099 aa14.53□□□□□ -0.08
MBD4-208ENST00000509828 MPRIPQ6WCQ1 1025 aa14.53□□□□□ -0.08
MBD4-208ENST00000509828 AK7Q96M32 723 aa14.53□□□□□ -0.08
MBD4-208ENST00000509828 SMG6Q86US8 1419 aaKnown RBP14.52□□□□□ -0.08
MBD4-208ENST00000509828 CGNL1Q0VF96 1302 aa14.52□□□□□ -0.08
MBD4-208ENST00000509828 RRS1Q15050 365 aaKnown RBP14.52□□□□□ -0.09
MBD4-208ENST00000509828 NBPF6Q5VWK0 638 aa14.52□□□□□ -0.09
MBD4-208ENST00000509828 NBPF4Q96M43 638 aa14.52□□□□□ -0.09
MBD4-208ENST00000509828 ATP10DQ9P241 1426 aa14.51□□□□□ -0.09
MBD4-208ENST00000509828 TONSLQ96HA7 1378 aa14.51□□□□□ -0.09
MBD4-208ENST00000509828 WWC3Q9ULE0 1092 aa14.51□□□□□ -0.09
MBD4-208ENST00000509828 NSD2O96028 1365 aa14.5□□□□□ -0.09
MBD4-208ENST00000509828 PHF14O94880 888 aa14.5□□□□□ -0.09
MBD4-208ENST00000509828 SMARCC1Q92922 1105 aaPredicted RBP14.5□□□□□ -0.09
MBD4-208ENST00000509828 GGNBP2Q9H3C7 697 aa14.5□□□□□ -0.09
MBD4-208ENST00000509828 USP54Q70EL1 1684 aa14.49□□□□□ -0.09
MBD4-208ENST00000509828 PCDH11XQ9BZA7 1347 aa14.49□□□□□ -0.09
MBD4-208ENST00000509828 PCDH11YQ9BZA8 1340 aa14.49□□□□□ -0.09
MBD4-208ENST00000509828 ST20-MTHFSA0A0A6YYL1 179 aa14.49□□□□□ -0.09
MBD4-208ENST00000509828 PALLDQ8WX93 1383 aa14.48□□□□□ -0.09
MBD4-208ENST00000509828 MEGF6O75095 1541 aa14.48□□□□□ -0.09
MBD4-208ENST00000509828 QSER1Q2KHR3 1735 aa14.48□□□□□ -0.09
MBD4-208ENST00000509828 FAM208AQ9UK61 1670 aaKnown RBP14.48□□□□□ -0.09
MBD4-208ENST00000509828 DOT1LQ8TEK3 1739 aa14.47□□□□□ -0.09
MBD4-208ENST00000509828 HSPA6P17066 643 aa14.47□□□□□ -0.09
MBD4-208ENST00000509828 RTL1A6NKG5 1358 aa14.47□□□□□ -0.09
MBD4-208ENST00000509828 HSP90AB2PQ58FF8 381 aa14.46□□□□□ -0.09
MBD4-208ENST00000509828 UTRNP46939 3433 aa14.46□□□□□ -0.09
MBD4-208ENST00000509828 IGSF1Q8N6C5 1336 aa14.45□□□□□ -0.1
MBD4-208ENST00000509828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.45□□□□□ -0.1
MBD4-208ENST00000509828 FYB1O15117 783 aa14.45□□□□□ -0.1
MBD4-208ENST00000509828 PPM1GO15355 546 aaPredicted RBP14.45□□□□□ -0.1
MBD4-208ENST00000509828 SHANK3Q9BYB0 1731 aa14.45□□□□□ -0.1
MBD4-208ENST00000509828 TMF1P82094 1093 aa14.44□□□□□ -0.1
MBD4-208ENST00000509828 SPG7Q9UQ90 795 aa14.44□□□□□ -0.1
MBD4-208ENST00000509828 NSD3Q9BZ95 1437 aa14.43□□□□□ -0.1
MBD4-208ENST00000509828 SMIM5Q71RC9 77 aa14.43□□□□□ -0.1
MBD4-208ENST00000509828 TESK2Q96S53 571 aa14.43□□□□□ -0.1
MBD4-208ENST00000509828 LY75O60449 1722 aa14.43□□□□□ -0.1
MBD4-208ENST00000509828 TUBGCP6Q96RT7 1819 aa14.43□□□□□ -0.1
MBD4-208ENST00000509828 CYP27B1O15528 508 aa14.42□□□□□ -0.1
MBD4-208ENST00000509828 PIGBQ92521 554 aa14.42□□□□□ -0.1
MBD4-208ENST00000509828 TMOD3Q9NYL9 352 aa14.42□□□□□ -0.1
MBD4-208ENST00000509828 INSRP06213 1382 aa14.42□□□□□ -0.1
MBD4-208ENST00000509828 COL24A1Q17RW2 1714 aa14.41□□□□□ -0.1
MBD4-208ENST00000509828 GNPATO15228 680 aa14.41□□□□□ -0.1
MBD4-208ENST00000509828 SSFA2P28290 1259 aa14.41□□□□□ -0.1
MBD4-208ENST00000509828 CDCA8Q53HL2 280 aa14.41□□□□□ -0.1
MBD4-208ENST00000509828 FLT4P35916 1363 aa14.41□□□□□ -0.1
MBD4-208ENST00000509828 LOC102724428A0A0B4J2F2 783 aa14.4□□□□□ -0.1
MBD4-208ENST00000509828 ATP6V1AP38606 617 aa14.4□□□□□ -0.1
MBD4-208ENST00000509828 SIK1P57059 783 aa14.4□□□□□ -0.1
MBD4-208ENST00000509828 RGPD2P0DJD1 1756 aa14.39□□□□□ -0.11
MBD4-208ENST00000509828 MMP10P09238 476 aa14.38□□□□□ -0.11
MBD4-208ENST00000509828 ARHGAP27Q6ZUM4 889 aa14.38□□□□□ -0.11
MBD4-208ENST00000509828 LINC00116Q8NCU8 138 aa14.38□□□□□ -0.11
MBD4-208ENST00000509828 BCS1LQ9Y276 419 aa14.38□□□□□ -0.11
MBD4-208ENST00000509828 C5P01031 1676 aa14.37□□□□□ -0.11
MBD4-208ENST00000509828 APLP1P51693 650 aa14.37□□□□□ -0.11
MBD4-208ENST00000509828 TRAPPC3LQ5T215 181 aa14.37□□□□□ -0.11
MBD4-208ENST00000509828 AMIGO3Q86WK7 504 aa14.37□□□□□ -0.11
MBD4-208ENST00000509828 EMILIN1Q9Y6C2 1016 aa14.37□□□□□ -0.11
MBD4-208ENST00000509828 ADCY9O60503 1353 aa14.36□□□□□ -0.11
MBD4-208ENST00000509828 KIF24Q5T7B8 1368 aa14.36□□□□□ -0.11
MBD4-208ENST00000509828 C16orf71Q8IYS4 520 aaPredicted RBP14.36□□□□□ -0.11
MBD4-208ENST00000509828 IFNL2Q8IZJ0 200 aa14.36□□□□□ -0.11
MBD4-208ENST00000509828 RBM42Q9BTD8 480 aaKnown RBP14.36□□□□□ -0.11
MBD4-208ENST00000509828 ASAP1Q9ULH1 1129 aa14.36□□□□□ -0.11
MBD4-208ENST00000509828 RTCBQ9Y3I0 505 aaKnown RBP14.36□□□□□ -0.11
MBD4-208ENST00000509828 A0A0G2JLW4 131 aa14.35□□□□□ -0.11
MBD4-208ENST00000509828 KIF3CO14782 793 aa14.35□□□□□ -0.11
MBD4-208ENST00000509828 NKX1-1Q15270 411 aaPredicted RBP14.35□□□□□ -0.11
MBD4-208ENST00000509828 NLGN1Q8N2Q7 840 aa14.35□□□□□ -0.11
MBD4-208ENST00000509828 C4BP0C0L5 1744 aa14.35□□□□□ -0.11
MBD4-208ENST00000509828 FCHSD2O94868 740 aa14.34□□□□□ -0.11
MBD4-208ENST00000509828 TGFB2P61812 414 aa14.34□□□□□ -0.11
MBD4-208ENST00000509828 CCDC87Q9NVE4 849 aa14.34□□□□□ -0.11
MBD4-208ENST00000509828 PARP3Q9Y6F1 533 aa14.34□□□□□ -0.11
MBD4-208ENST00000509828 TOMM70O94826 608 aa14.33□□□□□ -0.12
MBD4-208ENST00000509828 RFC4P35249 363 aa14.33□□□□□ -0.12
MBD4-208ENST00000509828 ITPK1Q13572 414 aa14.33□□□□□ -0.12
MBD4-208ENST00000509828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.33□□□□□ -0.122e-6■■■□□ 15.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms