RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 MAP2P11137 1827 aaKnown RBP29.31■■■□□ 2.28
LIN54-208ENST00000509748 ANKRD26Q9UPS8 1709 aa29.31■■■□□ 2.28
LIN54-208ENST00000509748 SMG6Q86US8 1419 aaKnown RBP29.3■■■□□ 2.28
LIN54-208ENST00000509748 BTAF1O14981 1849 aa29.29■■■□□ 2.28
LIN54-208ENST00000509748 POLKQ9UBT6 870 aa29.28■■■□□ 2.28
LIN54-208ENST00000509748 WASHC2AQ641Q2 1341 aa29.27■■■□□ 2.28
LIN54-208ENST00000509748 PPM1GO15355 546 aaPredicted RBP29.24■■■□□ 2.27
LIN54-208ENST00000509748 RAPGEF4Q8WZA2 1011 aa29.24■■■□□ 2.27
LIN54-208ENST00000509748 NCAPD2Q15021 1401 aa29.23■■■□□ 2.27
LIN54-208ENST00000509748 TATP17735 454 aaPredicted RBP29.21■■■□□ 2.27
LIN54-208ENST00000509748 PRIM1P49642 420 aaKnown RBP29.21■■■□□ 2.27
LIN54-208ENST00000509748 PDGFDQ9GZP0 370 aaPredicted RBP29.21■■■□□ 2.27
LIN54-208ENST00000509748 TNNT2P45379 298 aaPredicted RBP29.2■■■□□ 2.26
LIN54-208ENST00000509748 NSD2O96028 1365 aa29.2■■■□□ 2.26
LIN54-208ENST00000509748 CASZ1Q86V15 1759 aa29.2■■■□□ 2.26
LIN54-208ENST00000509748 DOT1LQ8TEK3 1739 aa29.2■■■□□ 2.26
LIN54-208ENST00000509748 KIF7Q2M1P5 1343 aa29.19■■■□□ 2.26
LIN54-208ENST00000509748 SLC15A2Q16348 729 aa29.18■■■□□ 2.26
LIN54-208ENST00000509748 EYA1Q99502 592 aa29.18■■■□□ 2.26
LIN54-208ENST00000509748 LRRC4BQ9NT99 713 aa29.18■■■□□ 2.26
LIN54-208ENST00000509748 PAPPAQ13219 1627 aa29.17■■■□□ 2.26
LIN54-208ENST00000509748 STK32BQ9NY57 414 aa29.17■■■□□ 2.26
LIN54-208ENST00000509748 CYP27B1O15528 508 aa29.14■■■□□ 2.26
LIN54-208ENST00000509748 SYTL4Q96C24 671 aaPredicted RBP29.14■■■□□ 2.26
LIN54-208ENST00000509748 SPON1Q9HCB6 807 aa29.14■■■□□ 2.26
LIN54-208ENST00000509748 EIF4A2Q14240 407 aaKnown RBP29.13■■■□□ 2.25
LIN54-208ENST00000509748 PKD1L3Q7Z443 1732 aa29.13■■■□□ 2.25
LIN54-208ENST00000509748 PCDH11XQ9BZA7 1347 aa29.13■■■□□ 2.25
LIN54-208ENST00000509748 PCDH11YQ9BZA8 1340 aa29.13■■■□□ 2.25
LIN54-208ENST00000509748 KNSTRNQ9Y448 316 aa29.11■■■□□ 2.25
LIN54-208ENST00000509748 AMER1Q5JTC6 1135 aaPredicted RBP29.1■■■□□ 2.25
LIN54-208ENST00000509748 SLC27A3Q5K4L6 730 aa29.1■■■□□ 2.25
LIN54-208ENST00000509748 LY75O60449 1722 aa29.09■■■□□ 2.25
LIN54-208ENST00000509748 ZNF827Q17R98 1081 aa29.09■■■□□ 2.25
LIN54-208ENST00000509748 MORC1Q86VD1 984 aa29.09■■■□□ 2.25
LIN54-208ENST00000509748 AKT1S1Q96B36 256 aa29.07■■■□□ 2.24
LIN54-208ENST00000509748 PER1O15534 1290 aaPredicted RBP29.06■■■□□ 2.24
LIN54-208ENST00000509748 ZBTB7AO95365 584 aa29.06■■■□□ 2.24
LIN54-208ENST00000509748 KCNQ4P56696 695 aa29.06■■■□□ 2.24
LIN54-208ENST00000509748 NKX1-1Q15270 411 aaPredicted RBP29.05■■■□□ 2.24
LIN54-208ENST00000509748 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.05■■■□□ 2.24
LIN54-208ENST00000509748 TOGARAM1Q9Y4F4 1720 aa29.05■■■□□ 2.24
LIN54-208ENST00000509748 IGSF1Q8N6C5 1336 aa29.04■■■□□ 2.24
LIN54-208ENST00000509748 PTGER2P43116 358 aa29.03■■■□□ 2.24
LIN54-208ENST00000509748 SPG7Q9UQ90 795 aa29.03■■■□□ 2.24
LIN54-208ENST00000509748 ITGB4P16144 1822 aa29.01■■■□□ 2.24
LIN54-208ENST00000509748 ATF5Q9Y2D1 282 aaPredicted RBP29.01■■■□□ 2.23
LIN54-208ENST00000509748 MPRIPQ6WCQ1 1025 aa28.99■■■□□ 2.23
LIN54-208ENST00000509748 PPP1R1BQ9UD71 204 aaPredicted RBP28.99■■■□□ 2.23
LIN54-208ENST00000509748 SGIP1Q9BQI5 828 aa28.98■■■□□ 2.23
LIN54-208ENST00000509748 MTFR1LQ9H019 292 aa28.98■■■□□ 2.23
LIN54-208ENST00000509748 CCNL1Q9UK58 526 aaPredicted RBP28.98■■■□□ 2.23
LIN54-208ENST00000509748 PLEKHG2Q9H7P9 1386 aa28.98■■■□□ 2.23
LIN54-208ENST00000509748 QSER1Q2KHR3 1735 aa28.97■■■□□ 2.23
LIN54-208ENST00000509748 PHKG2P15735 406 aa28.97■■■□□ 2.23
LIN54-208ENST00000509748 PIGBQ92521 554 aa28.96■■■□□ 2.23
LIN54-208ENST00000509748 TUBGCP6Q96RT7 1819 aa28.96■■■□□ 2.23
LIN54-208ENST00000509748 IFNL2Q8IZJ0 200 aa28.95■■■□□ 2.22
LIN54-208ENST00000509748 PNPLA7Q6ZV29 1317 aa28.94■■■□□ 2.22
LIN54-208ENST00000509748 PALLDQ8WX93 1383 aa28.93■■■□□ 2.22
LIN54-208ENST00000509748 IL13P35225 146 aa28.93■■■□□ 2.22
LIN54-208ENST00000509748 AEBP1Q8IUX7 1158 aa28.93■■■□□ 2.22
LIN54-208ENST00000509748 TFCP2L1Q9NZI6 479 aa28.91■■■□□ 2.22
LIN54-208ENST00000509748 MTHFSP49914 203 aa28.89■■■□□ 2.22
LIN54-208ENST00000509748 CC2D1BQ5T0F9 858 aaKnown RBP28.89■■■□□ 2.22
LIN54-208ENST00000509748 SMARCC1Q92922 1105 aaPredicted RBP28.89■■■□□ 2.22
LIN54-208ENST00000509748 TAF1LQ8IZX4 1826 aa28.89■■■□□ 2.22
LIN54-208ENST00000509748 NPC1L1Q9UHC9 1359 aa28.88■■■□□ 2.21
LIN54-208ENST00000509748 SLC16A10Q8TF71 515 aa28.88■■■□□ 2.21
LIN54-208ENST00000509748 KDRP35968 1356 aa28.88■■■□□ 2.21
LIN54-208ENST00000509748 C5P01031 1676 aa28.87■■■□□ 2.21
LIN54-208ENST00000509748 COL24A1Q17RW2 1714 aa28.87■■■□□ 2.21
LIN54-208ENST00000509748 PLEKHO1Q53GL0 409 aaPredicted RBP28.87■■■□□ 2.21
LIN54-208ENST00000509748 SULT6B1Q6IMI4 303 aa28.86■■■□□ 2.21
LIN54-208ENST00000509748 TMOD3Q9NYL9 352 aa28.85■■■□□ 2.21
LIN54-208ENST00000509748 AMOTQ4VCS5 1084 aa28.84■■■□□ 2.21
LIN54-208ENST00000509748 ASAP1Q9ULH1 1129 aa28.84■■■□□ 2.21
LIN54-208ENST00000509748 ZNF530Q6P9A1 599 aaPredicted RBP28.83■■■□□ 2.21
LIN54-208ENST00000509748 COL23A1Q86Y22 540 aaPredicted RBP28.83■■■□□ 2.21
LIN54-208ENST00000509748 ARXQ96QS3 562 aa28.82■■■□□ 2.2
LIN54-208ENST00000509748 FHDC1Q9C0D6 1143 aaPredicted RBP28.82■■■□□ 2.2
LIN54-208ENST00000509748 KDM6AO15550 1401 aaPredicted RBP28.81■■■□□ 2.2
LIN54-208ENST00000509748 ERVV-2B6SEH9 535 aa28.81■■■□□ 2.2
LIN54-208ENST00000509748 DCAF5Q96JK2 942 aa28.81■■■□□ 2.2
LIN54-208ENST00000509748 SYT17Q9BSW7 474 aa28.81■■■□□ 2.2
LIN54-208ENST00000509748 ATG3Q9NT62 314 aa28.81■■■□□ 2.2
LIN54-208ENST00000509748 LOC102724428A0A0B4J2F2 783 aa28.8■■■□□ 2.2
LIN54-208ENST00000509748 HSP90AB1P08238 724 aaKnown RBP28.8■■■□□ 2.2
LIN54-208ENST00000509748 SIK1P57059 783 aa28.8■■■□□ 2.2
LIN54-208ENST00000509748 C4BP0C0L5 1744 aa28.79■■■□□ 2.2
LIN54-208ENST00000509748 HMGB2P26583 209 aaKnown RBP28.78■■■□□ 2.2
LIN54-208ENST00000509748 AMIGO3Q86WK7 504 aa28.77■■■□□ 2.2
LIN54-208ENST00000509748 ITPK1Q13572 414 aa28.76■■■□□ 2.19
LIN54-208ENST00000509748 LINC00116Q8NCU8 138 aa28.76■■■□□ 2.19
LIN54-208ENST00000509748 MAP3K5Q99683 1374 aa28.75■■■□□ 2.19
LIN54-208ENST00000509748 COL3A1P02461 1466 aaPredicted RBP28.75■■■□□ 2.19
LIN54-208ENST00000509748 CNGB1Q14028 1251 aaPredicted RBP28.75■■■□□ 2.19
LIN54-208ENST00000509748 DIAPH1O60610 1272 aaKnown RBP28.74■■■□□ 2.19
LIN54-208ENST00000509748 UBR3Q6ZT12 1888 aa28.74■■■□□ 2.19
LIN54-208ENST00000509748 HMOX1P09601 288 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms