RNA–Protein interactions for RNA: ENST00000509712.5

CCDC30-213, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-213ENST00000509712 ZMIZ1Q9ULJ6 1067 aa7.08□□□□□ -1.28
CCDC30-213ENST00000509712 DKK1O94907 266 aa7.07□□□□□ -1.28
CCDC30-213ENST00000509712 CLDN10P78369 228 aa7.07□□□□□ -1.28
CCDC30-213ENST00000509712 ELOAQ14241 798 aaKnown RBP7.07□□□□□ -1.28
CCDC30-213ENST00000509712 EML3Q32P44 896 aa7.07□□□□□ -1.28
CCDC30-213ENST00000509712 CDCA8Q53HL2 280 aa7.07□□□□□ -1.28
CCDC30-213ENST00000509712 TOR4AQ9NXH8 423 aa7.07□□□□□ -1.28
CCDC30-213ENST00000509712 PCDHB11Q9Y5F2 797 aa7.07□□□□□ -1.28
CCDC30-213ENST00000509712 TMEM88BA6NKF7 163 aa7.06□□□□□ -1.28
CCDC30-213ENST00000509712 USP17L15C9J2P7 530 aa7.06□□□□□ -1.28
CCDC30-213ENST00000509712 USP17L10C9JJH3 530 aa7.06□□□□□ -1.28
CCDC30-213ENST00000509712 USP17L13C9JLJ4 530 aa7.06□□□□□ -1.28
CCDC30-213ENST00000509712 USP17L12C9JPN9 530 aa7.06□□□□□ -1.28
CCDC30-213ENST00000509712 USP17L11C9JVI0 530 aa7.06□□□□□ -1.28
CCDC30-213ENST00000509712 USP17L21D6R901 530 aa7.06□□□□□ -1.28
CCDC30-213ENST00000509712 USP17L18D6R9N7 530 aa7.06□□□□□ -1.28
CCDC30-213ENST00000509712 USP17L22D6RA61 530 aa7.06□□□□□ -1.28
CCDC30-213ENST00000509712 USP17L17D6RBQ6 530 aa7.06□□□□□ -1.28
CCDC30-213ENST00000509712 USP17L19D6RCP7 530 aa7.06□□□□□ -1.28
CCDC30-213ENST00000509712 USP17L20D6RJB6 530 aa7.06□□□□□ -1.28
CCDC30-213ENST00000509712 ATP5J2-PTCD1G3V325 749 aa7.06□□□□□ -1.28
CCDC30-213ENST00000509712 SCTRP47872 440 aa7.06□□□□□ -1.28
CCDC30-213ENST00000509712 ERVK-9P63128 1117 aa7.06□□□□□ -1.28
CCDC30-213ENST00000509712 USP17L24Q0WX57 530 aa7.06□□□□□ -1.28
CCDC30-213ENST00000509712 NR5A1Q13285 461 aa7.06□□□□□ -1.28
CCDC30-213ENST00000509712 PTK7Q13308 1070 aa7.06□□□□□ -1.28
CCDC30-213ENST00000509712 ARID5BQ14865 1188 aa7.06□□□□□ -1.28
CCDC30-213ENST00000509712 SNIP1Q8TAD8 396 aaKnown RBP7.06□□□□□ -1.28
CCDC30-213ENST00000509712 KIAA1024Q9UPX6 916 aa7.06□□□□□ -1.28
CCDC30-213ENST00000509712 OXLD1Q5BKU9 147 aa7.05□□□□□ -1.28
CCDC30-213ENST00000509712 CYP4X1Q8N118 509 aa7.05□□□□□ -1.28
CCDC30-213ENST00000509712 PCDHGA11Q9Y5H2 935 aa7.05□□□□□ -1.28
CCDC30-213ENST00000509712 ZBTB7BO15156 539 aaPredicted RBP7.04□□□□□ -1.28
CCDC30-213ENST00000509712 LILRA1O75019 489 aa7.04□□□□□ -1.28
CCDC30-213ENST00000509712 RAB15P59190 212 aa7.04□□□□□ -1.28
CCDC30-213ENST00000509712 CCDC116Q8IYX3 515 aa7.04□□□□□ -1.28
CCDC30-213ENST00000509712 TRAIPQ9BWF2 469 aa7.04□□□□□ -1.28
CCDC30-213ENST00000509712 TMPRSS4Q9NRS4 437 aa7.04□□□□□ -1.28
CCDC30-213ENST00000509712 USTQ9Y2C2 406 aa7.04□□□□□ -1.28
CCDC30-213ENST00000509712 TTC24A2A3L6 582 aaPredicted RBP7.03□□□□□ -1.28
CCDC30-213ENST00000509712 ALDH1A1P00352 501 aa7.03□□□□□ -1.28
CCDC30-213ENST00000509712 SIX5Q8N196 739 aa7.03□□□□□ -1.28
CCDC30-213ENST00000509712 OGFOD1Q8N543 542 aa7.03□□□□□ -1.28
CCDC30-213ENST00000509712 ZNF784Q8NCA9 323 aaPredicted RBP7.03□□□□□ -1.28
CCDC30-213ENST00000509712 STK32AQ8WU08 396 aa7.03□□□□□ -1.28
CCDC30-213ENST00000509712 KLF16Q9BXK1 252 aaPredicted RBP7.03□□□□□ -1.28
CCDC30-213ENST00000509712 NOD1Q9Y239 953 aa7.03□□□□□ -1.28
CCDC30-213ENST00000509712 J3QL48 77 aa7.03□□□□□ -1.28
CCDC30-213ENST00000509712 SMPD1P17405 629 aa7.03□□□□□ -1.28
CCDC30-213ENST00000509712 GTF2IP78347 998 aa7.03□□□□□ -1.28
CCDC30-213ENST00000509712 DHX9Q08211 1270 aaKnown RBP7.03□□□□□ -1.28
CCDC30-213ENST00000509712 PPP1R26Q5T8A7 1209 aaPredicted RBP7.03□□□□□ -1.28
CCDC30-213ENST00000509712 OSBPL3Q9H4L5 887 aa7.03□□□□□ -1.28
CCDC30-213ENST00000509712 NOVA2Q9UNW9 492 aaKnown RBP7.03□□□□□ -1.28
CCDC30-213ENST00000509712 RASA1P20936 1047 aa7.02□□□□□ -1.29
CCDC30-213ENST00000509712 FAM69CQ0P6D2 419 aa7.02□□□□□ -1.29
CCDC30-213ENST00000509712 USP4Q13107 963 aa7.02□□□□□ -1.29
CCDC30-213ENST00000509712 NNTQ13423 1086 aa7.02□□□□□ -1.29
CCDC30-213ENST00000509712 TMEM164Q5U3C3 297 aa7.02□□□□□ -1.29
CCDC30-213ENST00000509712 CC2D2BQ6DHV5 1058 aa7.02□□□□□ -1.29
CCDC30-213ENST00000509712 TRIM50Q86XT4 487 aa7.02□□□□□ -1.29
CCDC30-213ENST00000509712 STK17AQ9UEE5 414 aa7.02□□□□□ -1.29
CCDC30-213ENST00000509712 CARNS1A5YM72 827 aa7.01□□□□□ -1.29
CCDC30-213ENST00000509712 ATP1A2P50993 1020 aa7.01□□□□□ -1.29
CCDC30-213ENST00000509712 LARGE2Q8N3Y3 721 aa7.01□□□□□ -1.29
CCDC30-213ENST00000509712 DNAAF2Q9NVR5 837 aaKnown RBP7.01□□□□□ -1.29
CCDC30-213ENST00000509712 ANKMY2Q8IV38 441 aa7□□□□□ -1.29
CCDC30-213ENST00000509712 SIRT1Q96EB6 747 aa7□□□□□ -1.29
CCDC30-213ENST00000509712 ZNF594Q96JF6 807 aaPredicted RBP7□□□□□ -1.29
CCDC30-213ENST00000509712 CYLDQ9NQC7 956 aa7□□□□□ -1.29
CCDC30-213ENST00000509712 WASF2Q9Y6W5 498 aa7□□□□□ -1.29
CCDC30-213ENST00000509712 CSB-PGBD3P0DP91 1061 aa6.99□□□□□ -1.29
CCDC30-213ENST00000509712 ADD1P35611 737 aaKnown RBP6.99□□□□□ -1.29
CCDC30-213ENST00000509712 AAMPQ13685 434 aa6.99□□□□□ -1.29
CCDC30-213ENST00000509712 LARP1Q6PKG0 1096 aaKnown RBP6.99□□□□□ -1.29
CCDC30-213ENST00000509712 CHMP4AQ9BY43 222 aa6.99□□□□□ -1.29
CCDC30-213ENST00000509712 SLAIN2Q9P270 581 aa6.99□□□□□ -1.29
CCDC30-213ENST00000509712 EMILIN1Q9Y6C2 1016 aa6.99□□□□□ -1.29
CCDC30-213ENST00000509712 FAM187AA6NFU0 413 aa6.99□□□□□ -1.29
CCDC30-213ENST00000509712 SCNN1DP51172 638 aa6.99□□□□□ -1.29
CCDC30-213ENST00000509712 DPYDQ12882 1025 aa6.99□□□□□ -1.29
CCDC30-213ENST00000509712 KDF1Q8NAX2 398 aaPredicted RBP6.99□□□□□ -1.29
CCDC30-213ENST00000509712 TMEM229AB2RXF0 380 aa6.98□□□□□ -1.29
CCDC30-213ENST00000509712 WASLO00401 505 aaPredicted RBP6.98□□□□□ -1.29
CCDC30-213ENST00000509712 MYCP01106 439 aaPredicted RBP6.98□□□□□ -1.29
CCDC30-213ENST00000509712 HSP90B1P14625 803 aaKnown RBP6.98□□□□□ -1.29
CCDC30-213ENST00000509712 TIMP2P16035 220 aa6.98□□□□□ -1.29
CCDC30-213ENST00000509712 CCDC102BQ68D86 513 aa6.98□□□□□ -1.29
CCDC30-213ENST00000509712 TPCN2Q8NHX9 752 aa6.98□□□□□ -1.29
CCDC30-213ENST00000509712 ITPKCQ96DU7 683 aa6.98□□□□□ -1.29
CCDC30-213ENST00000509712 STAU1O95793 577 aaKnown RBP6.97□□□□□ -1.29
CCDC30-213ENST00000509712 CDK11BP21127 795 aaKnown RBP6.97□□□□□ -1.29
CCDC30-213ENST00000509712 Q6ZVU0 165 aa6.97□□□□□ -1.29
CCDC30-213ENST00000509712 HPS1Q92902 700 aa6.97□□□□□ -1.29
CCDC30-213ENST00000509712 PCGF6Q9BYE7 350 aa6.97□□□□□ -1.29
CCDC30-213ENST00000509712 PGPEP1Q9NXJ5 209 aa6.97□□□□□ -1.29
CCDC30-213ENST00000509712 PKDCCQ504Y2 493 aa6.96□□□□□ -1.29
CCDC30-213ENST00000509712 FAM200AQ8TCP9 573 aa6.96□□□□□ -1.29
CCDC30-213ENST00000509712 ZFAND3Q9H8U3 227 aa6.96□□□□□ -1.29
CCDC30-213ENST00000509712 BCCIPQ9P287 314 aaKnown RBP eCLIP6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms