RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 SHANK3Q9BYB0 1731 aa22.14■■□□□ 1.14
SKP2-205ENST00000509692 KAT6BQ8WYB5 2073 aa22.14■■□□□ 1.13
SKP2-205ENST00000509692 DDX54Q8TDD1 881 aaKnown RBP22.13■■□□□ 1.13
SKP2-205ENST00000509692 BCL11BQ9C0K0 894 aaPredicted RBP22.13■■□□□ 1.13
SKP2-205ENST00000509692 EIF4A2Q14240 407 aaKnown RBP22.13■■□□□ 1.13
SKP2-205ENST00000509692 EYA1Q99502 592 aa22.13■■□□□ 1.13
SKP2-205ENST00000509692 NCAPD2Q15021 1401 aa22.12■■□□□ 1.13
SKP2-205ENST00000509692 KCNQ2O43526 872 aa22.12■■□□□ 1.13
SKP2-205ENST00000509692 ZCRB1Q8TBF4 217 aaKnown RBP22.12■■□□□ 1.13
SKP2-205ENST00000509692 RAPGEF4Q8WZA2 1011 aa22.12■■□□□ 1.13
SKP2-205ENST00000509692 PPP2R1AP30153 589 aa22.11■■□□□ 1.13
SKP2-205ENST00000509692 PRKRIP1Q9H875 184 aaPredicted RBP22.11■■□□□ 1.13
SKP2-205ENST00000509692 MTHFSP49914 203 aa22.1■■□□□ 1.13
SKP2-205ENST00000509692 ACSBG1Q96GR2 724 aa22.1■■□□□ 1.13
SKP2-205ENST00000509692 TATP17735 454 aaPredicted RBP22.09■■□□□ 1.13
SKP2-205ENST00000509692 NHSQ6T4R5 1651 aa22.09■■□□□ 1.13
SKP2-205ENST00000509692 RREB1Q92766 1687 aa22.08■■□□□ 1.13
SKP2-205ENST00000509692 ANP32CO43423 234 aa22.08■■□□□ 1.13
SKP2-205ENST00000509692 PLSCR1O15162 318 aa22.06■■□□□ 1.12
SKP2-205ENST00000509692 MYBBP1AQ9BQG0 1328 aaKnown RBP22.06■■□□□ 1.12
SKP2-205ENST00000509692 RGPD3A6NKT7 1758 aaPredicted RBP22.05■■□□□ 1.12
SKP2-205ENST00000509692 RGPD4Q7Z3J3 1758 aa22.05■■□□□ 1.12
SKP2-205ENST00000509692 NUP188Q5SRE5 1749 aa22.04■■□□□ 1.12
SKP2-205ENST00000509692 IGSF1Q8N6C5 1336 aa22.04■■□□□ 1.12
SKP2-205ENST00000509692 PKD1L3Q7Z443 1732 aa22.04■■□□□ 1.12
SKP2-205ENST00000509692 DIEXFQ68CQ4 756 aaKnown RBP22.03■■□□□ 1.12
SKP2-205ENST00000509692 BTAF1O14981 1849 aa22.03■■□□□ 1.12
SKP2-205ENST00000509692 PROM2Q8N271 834 aa22.02■■□□□ 1.12
SKP2-205ENST00000509692 DOT1LQ8TEK3 1739 aa22.02■■□□□ 1.12
SKP2-205ENST00000509692 PSDA5PKW4 1024 aaPredicted RBP22.02■■□□□ 1.11
SKP2-205ENST00000509692 CYP27B1O15528 508 aa22.02■■□□□ 1.11
SKP2-205ENST00000509692 IL13P35225 146 aa22.01■■□□□ 1.11
SKP2-205ENST00000509692 CFAP53Q96M91 514 aa22.01■■□□□ 1.11
SKP2-205ENST00000509692 PCDH11XQ9BZA7 1347 aa22.01■■□□□ 1.11
SKP2-205ENST00000509692 PCDH11YQ9BZA8 1340 aa22.01■■□□□ 1.11
SKP2-205ENST00000509692 PRIM1P49642 420 aaKnown RBP22■■□□□ 1.11
SKP2-205ENST00000509692 COL3A1P02461 1466 aaPredicted RBP21.99■■□□□ 1.11
SKP2-205ENST00000509692 R3HDM1Q15032 1099 aaKnown RBP21.98■■□□□ 1.11
SKP2-205ENST00000509692 AEBP1Q8IUX7 1158 aa21.98■■□□□ 1.11
SKP2-205ENST00000509692 DIAPH1O60610 1272 aaKnown RBP21.98■■□□□ 1.11
SKP2-205ENST00000509692 SYTL4Q96C24 671 aaPredicted RBP21.98■■□□□ 1.11
SKP2-205ENST00000509692 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.98■■□□□ 1.11
SKP2-205ENST00000509692 TXNRD1Q16881 649 aa21.97■■□□□ 1.11
SKP2-205ENST00000509692 SPG7Q9UQ90 795 aa21.97■■□□□ 1.11
SKP2-205ENST00000509692 SULT6B1Q6IMI4 303 aa21.95■■□□□ 1.1
SKP2-205ENST00000509692 TOGARAM1Q9Y4F4 1720 aa21.94■■□□□ 1.1
SKP2-205ENST00000509692 KDRP35968 1356 aa21.94■■□□□ 1.1
SKP2-205ENST00000509692 NKX1-1Q15270 411 aaPredicted RBP21.93■■□□□ 1.1
SKP2-205ENST00000509692 NBPF14Q5TI25 921 aa21.93■■□□□ 1.1
SKP2-205ENST00000509692 ANO8Q9HCE9 1232 aaPredicted RBP21.92■■□□□ 1.1
SKP2-205ENST00000509692 PLEKHG2Q9H7P9 1386 aa21.92■■□□□ 1.1
SKP2-205ENST00000509692 ITGB4P16144 1822 aa21.92■■□□□ 1.1
SKP2-205ENST00000509692 PHKG2P15735 406 aa21.91■■□□□ 1.1
SKP2-205ENST00000509692 IFNL2Q8IZJ0 200 aa21.91■■□□□ 1.1
SKP2-205ENST00000509692 NUDCQ9Y266 331 aa21.9■■□□□ 1.1
SKP2-205ENST00000509692 U2SURPO15042 1029 aaKnown RBP21.89■■□□□ 1.09
SKP2-205ENST00000509692 LRRC4BQ9NT99 713 aa21.89■■□□□ 1.09
SKP2-205ENST00000509692 HMOX1P09601 288 aa21.88■■□□□ 1.09
SKP2-205ENST00000509692 PLEKHO1Q53GL0 409 aaPredicted RBP21.88■■□□□ 1.09
SKP2-205ENST00000509692 MPRIPQ6WCQ1 1025 aa21.88■■□□□ 1.09
SKP2-205ENST00000509692 LY75O60449 1722 aa21.88■■□□□ 1.09
SKP2-205ENST00000509692 AMOTQ4VCS5 1084 aa21.87■■□□□ 1.09
SKP2-205ENST00000509692 CCDC184Q52MB2 194 aa21.87■■□□□ 1.09
SKP2-205ENST00000509692 PAPPAQ13219 1627 aa21.85■■□□□ 1.09
SKP2-205ENST00000509692 KCNQ4P56696 695 aa21.85■■□□□ 1.09
SKP2-205ENST00000509692 ZNF530Q6P9A1 599 aaPredicted RBP21.85■■□□□ 1.09
SKP2-205ENST00000509692 PIGBQ92521 554 aa21.84■■□□□ 1.09
SKP2-205ENST00000509692 MRS2Q9HD23 443 aa21.84■■□□□ 1.09
SKP2-205ENST00000509692 U2AF1L5P0DN76 240 aaPredicted RBP21.84■■□□□ 1.09
SKP2-205ENST00000509692 U2AF1Q01081 240 aaKnown RBP eCLIP21.84■■□□□ 1.09
SKP2-205ENST00000509692 SLC27A3Q5K4L6 730 aa21.84■■□□□ 1.09
SKP2-205ENST00000509692 SLC15A2Q16348 729 aa21.83■■□□□ 1.08
SKP2-205ENST00000509692 MIER1Q8N108 512 aa21.83■■□□□ 1.08
SKP2-205ENST00000509692 PDGFDQ9GZP0 370 aaPredicted RBP21.82■■□□□ 1.08
SKP2-205ENST00000509692 STK32BQ9NY57 414 aa21.82■■□□□ 1.08
SKP2-205ENST00000509692 KDM6AO15550 1401 aaPredicted RBP21.81■■□□□ 1.08
SKP2-205ENST00000509692 LRP5O75197 1615 aa21.81■■□□□ 1.08
SKP2-205ENST00000509692 HSP90AB1P08238 724 aaKnown RBP21.8■■□□□ 1.08
SKP2-205ENST00000509692 WDR43Q15061 677 aaKnown RBP eCLIP21.8■■□□□ 1.08
SKP2-205ENST00000509692 ZNF827Q17R98 1081 aa21.8■■□□□ 1.08
SKP2-205ENST00000509692 DCAF5Q96JK2 942 aa21.8■■□□□ 1.08
SKP2-205ENST00000509692 TMOD3Q9NYL9 352 aa21.8■■□□□ 1.08
SKP2-205ENST00000509692 PALLDQ8WX93 1383 aa21.8■■□□□ 1.08
SKP2-205ENST00000509692 C1orf141Q5JVX7 400 aa21.8■■□□□ 1.08
SKP2-205ENST00000509692 CCNL1Q9UK58 526 aaPredicted RBP21.8■■□□□ 1.08
SKP2-205ENST00000509692 CASZ1Q86V15 1759 aa21.79■■□□□ 1.08
SKP2-205ENST00000509692 ERVV-2B6SEH9 535 aa21.78■■□□□ 1.08
SKP2-205ENST00000509692 CCER2I3L3R5 266 aa21.78■■□□□ 1.08
SKP2-205ENST00000509692 RSPH6AQ9H0K4 717 aa21.78■■□□□ 1.08
SKP2-205ENST00000509692 FCHSD2O94868 740 aa21.77■■□□□ 1.08
SKP2-205ENST00000509692 MTHFSDQ2M296 383 aaKnown RBP21.77■■□□□ 1.08
SKP2-205ENST00000509692 AKT1S1Q96B36 256 aa21.77■■□□□ 1.08
SKP2-205ENST00000509692 ASAP1Q9ULH1 1129 aa21.77■■□□□ 1.08
SKP2-205ENST00000509692 SMARCC1Q92922 1105 aaPredicted RBP21.77■■□□□ 1.07
SKP2-205ENST00000509692 SCN11AQ9UI33 1791 aa21.76■■□□□ 1.07
SKP2-205ENST00000509692 AKAP4Q5JQC9 854 aa21.76■■□□□ 1.07
SKP2-205ENST00000509692 TAF1LQ8IZX4 1826 aa21.75■■□□□ 1.07
SKP2-205ENST00000509692 PRKAR2BP31323 418 aa21.75■■□□□ 1.07
SKP2-205ENST00000509692 PNISRQ8TF01 805 aaKnown RBP21.75■■□□□ 1.07
SKP2-205ENST00000509692 ATG3Q9NT62 314 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms