RNA–Protein interactions for RNA: ENST00000509602.1

CAST-227, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-227ENST00000509602 VWA5B2Q8N398 1253 aa10.28□□□□□ -0.76
CAST-227ENST00000509602 COL25A1Q9BXS0 654 aaPredicted RBP10.28□□□□□ -0.76
CAST-227ENST00000509602 FOXD4L5Q5VV16 416 aaPredicted RBP10.27□□□□□ -0.77
CAST-227ENST00000509602 MTMR14Q8NCE2 650 aa10.27□□□□□ -0.77
CAST-227ENST00000509602 RNF144AP50876 292 aaPredicted RBP10.26□□□□□ -0.77
CAST-227ENST00000509602 SLC27A3Q5K4L6 730 aa10.26□□□□□ -0.77
CAST-227ENST00000509602 PRICKLE2Q7Z3G6 844 aa10.26□□□□□ -0.77
CAST-227ENST00000509602 PCDHB11Q9Y5F2 797 aa10.26□□□□□ -0.77
CAST-227ENST00000509602 GPC1P35052 558 aa10.25□□□□□ -0.77
CAST-227ENST00000509602 ERVK-9P63128 1117 aa10.25□□□□□ -0.77
CAST-227ENST00000509602 FOXR1Q6PIV2 292 aa10.25□□□□□ -0.77
CAST-227ENST00000509602 GPR161Q8N6U8 529 aaKnown RBP10.25□□□□□ -0.77
CAST-227ENST00000509602 RNF225M0QZC1 329 aaPredicted RBP10.24□□□□□ -0.77
CAST-227ENST00000509602 MYCP01106 439 aaPredicted RBP10.24□□□□□ -0.77
CAST-227ENST00000509602 A0A1W2PRU2 124 aa10.23□□□□□ -0.77
CAST-227ENST00000509602 SVOPQ8N4V2 548 aa10.23□□□□□ -0.77
CAST-227ENST00000509602 KDF1Q8NAX2 398 aaPredicted RBP10.23□□□□□ -0.77
CAST-227ENST00000509602 SENP3-EIF4A1A0A087X0R7 540 aa10.22□□□□□ -0.77
CAST-227ENST00000509602 SNRKQ9NRH2 765 aa10.22□□□□□ -0.77
CAST-227ENST00000509602 RHOQP17081 205 aa10.21□□□□□ -0.77
CAST-227ENST00000509602 EIF4G2P78344 907 aaKnown RBP eCLIP10.21□□□□□ -0.77
CAST-227ENST00000509602 KRT76Q01546 638 aa10.21□□□□□ -0.77
CAST-227ENST00000509602 GMCL1Q96IK5 515 aa10.21□□□□□ -0.77
CAST-227ENST00000509602 GTF2E1P29083 439 aaPredicted RBP10.2□□□□□ -0.78
CAST-227ENST00000509602 CLN3Q13286 438 aa10.2□□□□□ -0.78
CAST-227ENST00000509602 RIPOR1Q6ZS17 1223 aa10.2□□□□□ -0.78
CAST-227ENST00000509602 NISCHQ9Y2I1 1504 aa10.19□□□□□ -0.78
CAST-227ENST00000509602 H7C1W4 665 aa10.19□□□□□ -0.78
CAST-227ENST00000509602 ARHGEF10LQ9HCE6 1279 aa10.19□□□□□ -0.78
CAST-227ENST00000509602 MAP3K10Q02779 954 aa10.18□□□□□ -0.78
CAST-227ENST00000509602 RNFT1Q5M7Z0 435 aa10.18□□□□□ -0.78
CAST-227ENST00000509602 SCTRP47872 440 aa10.17□□□□□ -0.78
CAST-227ENST00000509602 TRERF1Q96PN7 1200 aa10.17□□□□□ -0.78
CAST-227ENST00000509602 GAS2L1Q99501 681 aaPredicted RBP10.17□□□□□ -0.78
CAST-227ENST00000509602 DYRK1BQ9Y463 629 aa10.17□□□□□ -0.78
CAST-227ENST00000509602 GNRH1P01148 92 aa10.16□□□□□ -0.78
CAST-227ENST00000509602 TRIM22Q8IYM9 498 aa10.16□□□□□ -0.78
CAST-227ENST00000509602 TBC1D2BQ9UPU7 963 aa10.16□□□□□ -0.78
CAST-227ENST00000509602 SLURP2P0DP57 97 aa10.15□□□□□ -0.78
CAST-227ENST00000509602 SRSF11Q05519 484 aaKnown RBP10.15□□□□□ -0.78
CAST-227ENST00000509602 POU4F2Q12837 409 aa10.15□□□□□ -0.78
CAST-227ENST00000509602 SLFNL1Q499Z3 407 aa10.15□□□□□ -0.78
CAST-227ENST00000509602 TAS1R3Q7RTX0 852 aa10.15□□□□□ -0.78
CAST-227ENST00000509602 OSBPL3Q9H4L5 887 aa10.15□□□□□ -0.78
CAST-227ENST00000509602 CEP126Q9P2H0 1117 aa10.15□□□□□ -0.78
CAST-227ENST00000509602 MARSP56192 900 aaKnown RBP10.14□□□□□ -0.79
CAST-227ENST00000509602 ESCO1Q5FWF5 840 aa10.14□□□□□ -0.79
CAST-227ENST00000509602 WDR44Q5JSH3 913 aa10.14□□□□□ -0.79
CAST-227ENST00000509602 ZNF837Q96EG3 531 aaPredicted RBP10.14□□□□□ -0.79
CAST-227ENST00000509602 TIMMDC1Q9NPL8 285 aa10.14□□□□□ -0.79
CAST-227ENST00000509602 ADAMTS8Q9UP79 889 aa10.14□□□□□ -0.79
CAST-227ENST00000509602 TRAK2O60296 914 aa10.13□□□□□ -0.79
CAST-227ENST00000509602 GPR37L1O60883 481 aa10.13□□□□□ -0.79
CAST-227ENST00000509602 ADAMTS2O95450 1211 aa10.13□□□□□ -0.79
CAST-227ENST00000509602 ZNF385CQ66K41 422 aaPredicted RBP10.13□□□□□ -0.79
CAST-227ENST00000509602 NBPF10Q6P3W6 841 aaKnown RBP10.13□□□□□ -0.79
CAST-227ENST00000509602 NBPF15Q8N660 670 aa10.13□□□□□ -0.79
CAST-227ENST00000509602 SIRT1Q96EB6 747 aa10.13□□□□□ -0.79
CAST-227ENST00000509602 ENAMQ9NRM1 1142 aa10.13□□□□□ -0.79
CAST-227ENST00000509602 RAB6BQ9NRW1 208 aa10.13□□□□□ -0.79
CAST-227ENST00000509602 DOLKQ9UPQ8 538 aa10.13□□□□□ -0.79
CAST-227ENST00000509602 WASLO00401 505 aaPredicted RBP10.12□□□□□ -0.79
CAST-227ENST00000509602 KCNMA1Q12791 1236 aa10.12□□□□□ -0.79
CAST-227ENST00000509602 USP4Q13107 963 aa10.12□□□□□ -0.79
CAST-227ENST00000509602 CNKSR1Q969H4 720 aa10.12□□□□□ -0.79
CAST-227ENST00000509602 GRIP2Q9C0E4 1043 aa10.12□□□□□ -0.79
CAST-227ENST00000509602 MBIPQ9NS73 344 aa10.12□□□□□ -0.79
CAST-227ENST00000509602 NSFL1CQ9UNZ2 370 aaKnown RBP10.12□□□□□ -0.79
CAST-227ENST00000509602 SPATA31C2B4DYI2 1134 aa10.11□□□□□ -0.79
CAST-227ENST00000509602 GNASQ5JWF2 1037 aa10.11□□□□□ -0.79
CAST-227ENST00000509602 RNF135Q8IUD6 432 aa10.11□□□□□ -0.79
CAST-227ENST00000509602 ESYT1Q9BSJ8 1104 aa10.11□□□□□ -0.79
CAST-227ENST00000509602 CUEDC1Q9NWM3 386 aaPredicted RBP10.11□□□□□ -0.79
CAST-227ENST00000509602 ZSCAN10Q96SZ4 725 aaPredicted RBP10.1□□□□□ -0.79
CAST-227ENST00000509602 ABL2P42684 1182 aa10.09□□□□□ -0.79
CAST-227ENST00000509602 WASHC4Q2M389 1173 aa10.09□□□□□ -0.79
CAST-227ENST00000509602 TMEM214Q6NUQ4 689 aaKnown RBP10.09□□□□□ -0.79
CAST-227ENST00000509602 TMEM151AQ8N4L1 468 aa10.09□□□□□ -0.79
CAST-227ENST00000509602 GPR25O00155 361 aa10.08□□□□□ -0.8
CAST-227ENST00000509602 F11P03951 625 aa10.08□□□□□ -0.8
CAST-227ENST00000509602 GTPBP3Q969Y2 492 aaKnown RBP10.08□□□□□ -0.8
CAST-227ENST00000509602 SCARF2Q96GP6 870 aaPredicted RBP10.08□□□□□ -0.8
CAST-227ENST00000509602 CCDC85AQ96PX6 553 aaPredicted RBP10.08□□□□□ -0.8
CAST-227ENST00000509602 NUCKS1Q9H1E3 243 aaKnown RBP10.08□□□□□ -0.8
CAST-227ENST00000509602 GDF11O95390 407 aa10.07□□□□□ -0.8
CAST-227ENST00000509602 CSB-PGBD3P0DP91 1061 aa10.07□□□□□ -0.8
CAST-227ENST00000509602 CENPCQ03188 943 aa10.07□□□□□ -0.8
CAST-227ENST00000509602 DBN1Q16643 649 aa10.07□□□□□ -0.8
CAST-227ENST00000509602 OXLD1Q5BKU9 147 aa10.07□□□□□ -0.8
CAST-227ENST00000509602 PGBD3Q8N328 593 aa10.07□□□□□ -0.8
CAST-227ENST00000509602 WHAMMQ8TF30 809 aa10.07□□□□□ -0.8
CAST-227ENST00000509602 CDCA7Q9BWT1 371 aaPredicted RBP10.07□□□□□ -0.8
CAST-227ENST00000509602 A0A1B0GTH6 734 aa10.06□□□□□ -0.8
CAST-227ENST00000509602 RASSF7Q02833 373 aa10.06□□□□□ -0.8
CAST-227ENST00000509602 VAC14Q08AM6 782 aa10.06□□□□□ -0.8
CAST-227ENST00000509602 SEMA3FQ13275 785 aa10.06□□□□□ -0.8
CAST-227ENST00000509602 GAS6Q14393 721 aa10.06□□□□□ -0.8
CAST-227ENST00000509602 WWC1Q8IX03 1113 aa10.06□□□□□ -0.8
CAST-227ENST00000509602 PHF24Q9UPV7 400 aa10.06□□□□□ -0.8
CAST-227ENST00000509602 IL2RAP01589 272 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms