RNA–Protein interactions for RNA: ENST00000509407.5

SPARCL1-206, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-206ENST00000509407 SLC35F4A4IF30 521 aa7.11□□□□□ -1.27
SPARCL1-206ENST00000509407 RAD21O60216 631 aa7.11□□□□□ -1.27
SPARCL1-206ENST00000509407 CCDC125Q86Z20 511 aa7.11□□□□□ -1.27
SPARCL1-206ENST00000509407 RNF217Q8TC41 542 aa7.11□□□□□ -1.27
SPARCL1-206ENST00000509407 ZNF592Q92610 1267 aa7.11□□□□□ -1.27
SPARCL1-206ENST00000509407 LILRA1O75019 489 aa7.1□□□□□ -1.27
SPARCL1-206ENST00000509407 ITGA6P23229 1130 aa7.1□□□□□ -1.27
SPARCL1-206ENST00000509407 PTGIRP43119 386 aa7.1□□□□□ -1.27
SPARCL1-206ENST00000509407 TAF7LQ5H9L4 462 aa7.1□□□□□ -1.27
SPARCL1-206ENST00000509407 PCDHB9Q9Y5E1 797 aa7.1□□□□□ -1.27
SPARCL1-206ENST00000509407 ADD1P35611 737 aaKnown RBP7.09□□□□□ -1.27
SPARCL1-206ENST00000509407 MCCD1P59942 119 aaPredicted RBP7.09□□□□□ -1.27
SPARCL1-206ENST00000509407 GPR161Q8N6U8 529 aaKnown RBP7.09□□□□□ -1.27
SPARCL1-206ENST00000509407 CNTNAP3BQ96NU0 1288 aa7.09□□□□□ -1.27
SPARCL1-206ENST00000509407 POLR3GLQ9BT43 218 aa7.09□□□□□ -1.27
SPARCL1-206ENST00000509407 CNTNAP3Q9BZ76 1288 aa7.09□□□□□ -1.27
SPARCL1-206ENST00000509407 CYLDQ9NQC7 956 aa7.09□□□□□ -1.27
SPARCL1-206ENST00000509407 CDC14CA4D256 554 aa7.08□□□□□ -1.28
SPARCL1-206ENST00000509407 APBB1O00213 710 aa7.08□□□□□ -1.28
SPARCL1-206ENST00000509407 RNF20Q5VTR2 975 aa7.08□□□□□ -1.28
SPARCL1-206ENST00000509407 SV2AQ7L0J3 742 aa7.08□□□□□ -1.28
SPARCL1-206ENST00000509407 GJD4Q96KN9 370 aaPredicted RBP7.08□□□□□ -1.28
SPARCL1-206ENST00000509407 COL25A1Q9BXS0 654 aaPredicted RBP7.08□□□□□ -1.28
SPARCL1-206ENST00000509407 ZNF330Q9Y3S2 320 aaPredicted RBP7.08□□□□□ -1.28
SPARCL1-206ENST00000509407 GIGYF1O75420 1035 aaPredicted RBP7.07□□□□□ -1.28
SPARCL1-206ENST00000509407 FBXO45P0C2W1 286 aa7.07□□□□□ -1.28
SPARCL1-206ENST00000509407 KRT76Q01546 638 aa7.07□□□□□ -1.28
SPARCL1-206ENST00000509407 PDE4CQ08493 712 aa7.07□□□□□ -1.28
SPARCL1-206ENST00000509407 FOXD4L5Q5VV16 416 aaPredicted RBP7.07□□□□□ -1.28
SPARCL1-206ENST00000509407 LYSMD3Q7Z3D4 306 aa7.07□□□□□ -1.28
SPARCL1-206ENST00000509407 DHX37Q8IY37 1157 aaKnown RBP7.07□□□□□ -1.28
SPARCL1-206ENST00000509407 ATP5J2-PTCD1G3V325 749 aa7.06□□□□□ -1.28
SPARCL1-206ENST00000509407 VWA5B2Q8N398 1253 aa7.06□□□□□ -1.28
SPARCL1-206ENST00000509407 BANK1Q8NDB2 785 aa7.06□□□□□ -1.28
SPARCL1-206ENST00000509407 C1orf115Q9H7X2 142 aa7.06□□□□□ -1.28
SPARCL1-206ENST00000509407 SOCS7O14512 581 aa7.05□□□□□ -1.28
SPARCL1-206ENST00000509407 NEFLP07196 543 aa7.05□□□□□ -1.28
SPARCL1-206ENST00000509407 RNF144AP50876 292 aaPredicted RBP7.05□□□□□ -1.28
SPARCL1-206ENST00000509407 NR1H3Q13133 447 aa7.05□□□□□ -1.28
SPARCL1-206ENST00000509407 KDF1Q8NAX2 398 aaPredicted RBP7.05□□□□□ -1.28
SPARCL1-206ENST00000509407 BCL11AQ9H165 835 aa7.05□□□□□ -1.28
SPARCL1-206ENST00000509407 NDUFB9Q9Y6M9 179 aa7.05□□□□□ -1.28
SPARCL1-206ENST00000509407 SENP3-EIF4A1A0A087X0R7 540 aa7.04□□□□□ -1.28
SPARCL1-206ENST00000509407 GPC1P35052 558 aa7.04□□□□□ -1.28
SPARCL1-206ENST00000509407 CC2D2BQ6DHV5 1058 aa7.04□□□□□ -1.28
SPARCL1-206ENST00000509407 FAM9AQ8IZU1 332 aaPredicted RBP7.04□□□□□ -1.28
SPARCL1-206ENST00000509407 RGS22Q8NE09 1264 aa7.04□□□□□ -1.28
SPARCL1-206ENST00000509407 ESF1Q9H501 851 aaKnown RBP7.04□□□□□ -1.28
SPARCL1-206ENST00000509407 RNF225M0QZC1 329 aaPredicted RBP7.03□□□□□ -1.28
SPARCL1-206ENST00000509407 MEN1O00255 615 aa7.03□□□□□ -1.28
SPARCL1-206ENST00000509407 ERVK-9P63128 1117 aa7.03□□□□□ -1.28
SPARCL1-206ENST00000509407 RNFT1Q5M7Z0 435 aa7.03□□□□□ -1.28
SPARCL1-206ENST00000509407 PRICKLE2Q7Z3G6 844 aa7.03□□□□□ -1.28
SPARCL1-206ENST00000509407 KCNMA1Q12791 1236 aa7.02□□□□□ -1.29
SPARCL1-206ENST00000509407 CYP2U1Q7Z449 544 aa7.02□□□□□ -1.29
SPARCL1-206ENST00000509407 SVOPQ8N4V2 548 aa7.02□□□□□ -1.29
SPARCL1-206ENST00000509407 NLRP3Q96P20 1036 aa7.02□□□□□ -1.29
SPARCL1-206ENST00000509407 A0A1W2PRU2 124 aa7.01□□□□□ -1.29
SPARCL1-206ENST00000509407 SLURP2P0DP57 97 aa7.01□□□□□ -1.29
SPARCL1-206ENST00000509407 RBM25P49756 843 aaKnown RBP7.01□□□□□ -1.29
SPARCL1-206ENST00000509407 MTMR14Q8NCE2 650 aa7.01□□□□□ -1.29
SPARCL1-206ENST00000509407 GMCL1Q96IK5 515 aa7.01□□□□□ -1.29
SPARCL1-206ENST00000509407 BCCIPQ9P287 314 aaKnown RBP eCLIP7.01□□□□□ -1.29
SPARCL1-206ENST00000509407 PCDHB11Q9Y5F2 797 aa7.01□□□□□ -1.29
SPARCL1-206ENST00000509407 RHOQP17081 205 aa7□□□□□ -1.29
SPARCL1-206ENST00000509407 SLC27A3Q5K4L6 730 aa7□□□□□ -1.29
SPARCL1-206ENST00000509407 ZNF385CQ66K41 422 aaPredicted RBP7□□□□□ -1.29
SPARCL1-206ENST00000509407 FOXR1Q6PIV2 292 aa7□□□□□ -1.29
SPARCL1-206ENST00000509407 ADAMTS8Q9UP79 889 aa7□□□□□ -1.29
SPARCL1-206ENST00000509407 MTMR7Q9Y216 660 aa7□□□□□ -1.29
SPARCL1-206ENST00000509407 TMCO4Q5TGY1 634 aa6.99□□□□□ -1.29
SPARCL1-206ENST00000509407 PRM3Q9NNZ6 103 aa6.99□□□□□ -1.29
SPARCL1-206ENST00000509407 ARID3CA6NKF2 412 aa6.98□□□□□ -1.29
SPARCL1-206ENST00000509407 H7C1W4 665 aa6.98□□□□□ -1.29
SPARCL1-206ENST00000509407 CLN3Q13286 438 aa6.98□□□□□ -1.29
SPARCL1-206ENST00000509407 RIPOR1Q6ZS17 1223 aa6.98□□□□□ -1.29
SPARCL1-206ENST00000509407 TRIM22Q8IYM9 498 aa6.98□□□□□ -1.29
SPARCL1-206ENST00000509407 TRAIPQ9BWF2 469 aa6.98□□□□□ -1.29
SPARCL1-206ENST00000509407 DYRK1BQ9Y463 629 aa6.98□□□□□ -1.29
SPARCL1-206ENST00000509407 E9PSI1 815 aa6.97□□□□□ -1.29
SPARCL1-206ENST00000509407 ADAMTS2O95450 1211 aa6.97□□□□□ -1.29
SPARCL1-206ENST00000509407 MYCP01106 439 aaPredicted RBP6.97□□□□□ -1.29
SPARCL1-206ENST00000509407 SCTRP47872 440 aa6.97□□□□□ -1.29
SPARCL1-206ENST00000509407 MAP3K10Q02779 954 aa6.97□□□□□ -1.29
SPARCL1-206ENST00000509407 SRSF11Q05519 484 aaKnown RBP6.97□□□□□ -1.29
SPARCL1-206ENST00000509407 TMEM151AQ8N4L1 468 aa6.97□□□□□ -1.29
SPARCL1-206ENST00000509407 SNRKQ9NRH2 765 aa6.97□□□□□ -1.29
SPARCL1-206ENST00000509407 CUEDC1Q9NWM3 386 aaPredicted RBP6.97□□□□□ -1.29
SPARCL1-206ENST00000509407 TRAK2O60296 914 aa6.96□□□□□ -1.3
SPARCL1-206ENST00000509407 GPR37L1O60883 481 aa6.96□□□□□ -1.3
SPARCL1-206ENST00000509407 MARSP56192 900 aaKnown RBP6.96□□□□□ -1.3
SPARCL1-206ENST00000509407 WHAMMQ8TF30 809 aa6.96□□□□□ -1.3
SPARCL1-206ENST00000509407 ZNF837Q96EG3 531 aaPredicted RBP6.96□□□□□ -1.3
SPARCL1-206ENST00000509407 OSBPL3Q9H4L5 887 aa6.96□□□□□ -1.3
SPARCL1-206ENST00000509407 ARHGEF10LQ9HCE6 1279 aa6.96□□□□□ -1.3
SPARCL1-206ENST00000509407 USP35Q9P2H5 1018 aa6.96□□□□□ -1.3
SPARCL1-206ENST00000509407 ARHGEF15O94989 841 aa6.95□□□□□ -1.3
SPARCL1-206ENST00000509407 GDF11O95390 407 aa6.95□□□□□ -1.3
SPARCL1-206ENST00000509407 GNRH1P01148 92 aa6.95□□□□□ -1.3
SPARCL1-206ENST00000509407 RASSF7Q02833 373 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms