RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 DOT1LQ8TEK3 1739 aa20.25■□□□□ 0.83
HMGCL-208ENST00000509389 PRIM1P49642 420 aaKnown RBP20.24■□□□□ 0.83
HMGCL-208ENST00000509389 ZNF827Q17R98 1081 aa20.24■□□□□ 0.83
HMGCL-208ENST00000509389 CARD14Q9BXL6 1004 aa20.24■□□□□ 0.83
HMGCL-208ENST00000509389 MTFR1LQ9H019 292 aa20.24■□□□□ 0.83
HMGCL-208ENST00000509389 DCAF8L1A6NGE4 600 aa20.23■□□□□ 0.83
HMGCL-208ENST00000509389 USHBP1Q8N6Y0 703 aa20.23■□□□□ 0.83
HMGCL-208ENST00000509389 SYTL4Q96C24 671 aaPredicted RBP20.23■□□□□ 0.83
HMGCL-208ENST00000509389 HSP90AB2PQ58FF8 381 aa20.22■□□□□ 0.83
HMGCL-208ENST00000509389 SGIP1Q9BQI5 828 aa20.22■□□□□ 0.83
HMGCL-208ENST00000509389 SMG6Q86US8 1419 aaKnown RBP20.22■□□□□ 0.83
HMGCL-208ENST00000509389 INSRP06213 1382 aa20.21■□□□□ 0.83
HMGCL-208ENST00000509389 SLC27A3Q5K4L6 730 aa20.21■□□□□ 0.83
HMGCL-208ENST00000509389 NSD2O96028 1365 aa20.21■□□□□ 0.83
HMGCL-208ENST00000509389 YY1P25490 414 aa20.21■□□□□ 0.83
HMGCL-208ENST00000509389 AKT1S1Q96B36 256 aa20.21■□□□□ 0.83
HMGCL-208ENST00000509389 NSD3Q9BZ95 1437 aa20.2■□□□□ 0.82
HMGCL-208ENST00000509389 CGNL1Q0VF96 1302 aa20.2■□□□□ 0.82
HMGCL-208ENST00000509389 FLT4P35916 1363 aa20.2■□□□□ 0.82
HMGCL-208ENST00000509389 RAPGEF4Q8WZA2 1011 aa20.2■□□□□ 0.82
HMGCL-208ENST00000509389 LY75O60449 1722 aa20.19■□□□□ 0.82
HMGCL-208ENST00000509389 KIF24Q5T7B8 1368 aa20.19■□□□□ 0.82
HMGCL-208ENST00000509389 ZNF316A6NFI3 1004 aaPredicted RBP20.19■□□□□ 0.82
HMGCL-208ENST00000509389 QSER1Q2KHR3 1735 aa20.18■□□□□ 0.82
HMGCL-208ENST00000509389 TATP17735 454 aaPredicted RBP20.18■□□□□ 0.82
HMGCL-208ENST00000509389 KCNQ4P56696 695 aa20.18■□□□□ 0.82
HMGCL-208ENST00000509389 SYT17Q9BSW7 474 aa20.18■□□□□ 0.82
HMGCL-208ENST00000509389 FHDC1Q9C0D6 1143 aaPredicted RBP20.18■□□□□ 0.82
HMGCL-208ENST00000509389 EMILIN1Q9Y6C2 1016 aa20.17■□□□□ 0.82
HMGCL-208ENST00000509389 TUBGCP6Q96RT7 1819 aa20.15■□□□□ 0.82
HMGCL-208ENST00000509389 ARXQ96QS3 562 aa20.15■□□□□ 0.82
HMGCL-208ENST00000509389 PNPLA7Q6ZV29 1317 aa20.14■□□□□ 0.81
HMGCL-208ENST00000509389 SLC16A10Q8TF71 515 aa20.13■□□□□ 0.81
HMGCL-208ENST00000509389 TFCP2L1Q9NZI6 479 aa20.13■□□□□ 0.81
HMGCL-208ENST00000509389 PCDH11XQ9BZA7 1347 aa20.13■□□□□ 0.81
HMGCL-208ENST00000509389 PCDH11YQ9BZA8 1340 aa20.13■□□□□ 0.81
HMGCL-208ENST00000509389 MAP2P11137 1827 aaKnown RBP20.13■□□□□ 0.81
HMGCL-208ENST00000509389 ANKRD26Q9UPS8 1709 aa20.12■□□□□ 0.81
HMGCL-208ENST00000509389 CCNL1Q9UK58 526 aaPredicted RBP20.12■□□□□ 0.81
HMGCL-208ENST00000509389 COL24A1Q17RW2 1714 aa20.12■□□□□ 0.81
HMGCL-208ENST00000509389 PPM1GO15355 546 aaPredicted RBP20.11■□□□□ 0.81
HMGCL-208ENST00000509389 POLR3GLQ9BT43 218 aa20.1■□□□□ 0.81
HMGCL-208ENST00000509389 PKD1L3Q7Z443 1732 aa20.1■□□□□ 0.81
HMGCL-208ENST00000509389 NCAPD2Q15021 1401 aa20.09■□□□□ 0.81
HMGCL-208ENST00000509389 MAP3K5Q99683 1374 aa20.09■□□□□ 0.81
HMGCL-208ENST00000509389 WASHC2AQ641Q2 1341 aa20.09■□□□□ 0.81
HMGCL-208ENST00000509389 CYP27B1O15528 508 aa20.09■□□□□ 0.81
HMGCL-208ENST00000509389 ITGB4P16144 1822 aa20.08■□□□□ 0.8
HMGCL-208ENST00000509389 POLKQ9UBT6 870 aa20.08■□□□□ 0.8
HMGCL-208ENST00000509389 TOGARAM1Q9Y4F4 1720 aa20.07■□□□□ 0.8
HMGCL-208ENST00000509389 POLD1P28340 1107 aa20.07■□□□□ 0.8
HMGCL-208ENST00000509389 MPRIPQ6WCQ1 1025 aa20.07■□□□□ 0.8
HMGCL-208ENST00000509389 C5P01031 1676 aa20.06■□□□□ 0.8
HMGCL-208ENST00000509389 EIF4G2P78344 907 aaKnown RBP eCLIP20.06■□□□□ 0.8
HMGCL-208ENST00000509389 EYA1Q99502 592 aa20.06■□□□□ 0.8
HMGCL-208ENST00000509389 PALLDQ8WX93 1383 aa20.05■□□□□ 0.8
HMGCL-208ENST00000509389 HSPA5P11021 654 aaKnown RBP20.05■□□□□ 0.8
HMGCL-208ENST00000509389 TAF1LQ8IZX4 1826 aa20.04■□□□□ 0.8
HMGCL-208ENST00000509389 COL23A1Q86Y22 540 aaPredicted RBP20.04■□□□□ 0.8
HMGCL-208ENST00000509389 CHD4Q14839 1912 aa20.03■□□□□ 0.8
HMGCL-208ENST00000509389 TNNT2P45379 298 aaPredicted RBP20.03■□□□□ 0.8
HMGCL-208ENST00000509389 NKX1-1Q15270 411 aaPredicted RBP20.03■□□□□ 0.8
HMGCL-208ENST00000509389 KLHL34Q8N239 644 aa20.03■□□□□ 0.8
HMGCL-208ENST00000509389 SPG7Q9UQ90 795 aa20.03■□□□□ 0.8
HMGCL-208ENST00000509389 MSH5O43196 834 aa20.02■□□□□ 0.8
HMGCL-208ENST00000509389 PIGBQ92521 554 aa20.01■□□□□ 0.79
HMGCL-208ENST00000509389 SMARCC1Q92922 1105 aaPredicted RBP20.01■□□□□ 0.79
HMGCL-208ENST00000509389 PANK3Q9H999 370 aa20.01■□□□□ 0.79
HMGCL-208ENST00000509389 UTRNP46939 3433 aa20.01■□□□□ 0.79
HMGCL-208ENST00000509389 EIF4A2Q14240 407 aaKnown RBP20■□□□□ 0.79
HMGCL-208ENST00000509389 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20■□□□□ 0.79
HMGCL-208ENST00000509389 HMGB2P26583 209 aaKnown RBP19.99■□□□□ 0.79
HMGCL-208ENST00000509389 GPR162Q16538 588 aa19.98■□□□□ 0.79
HMGCL-208ENST00000509389 C4BP0C0L5 1744 aa19.98■□□□□ 0.79
HMGCL-208ENST00000509389 MSL1Q68DK7 614 aa19.97■□□□□ 0.79
HMGCL-208ENST00000509389 NLGN2Q8NFZ4 835 aa19.97■□□□□ 0.79
HMGCL-208ENST00000509389 PHKG2P15735 406 aa19.96■□□□□ 0.79
HMGCL-208ENST00000509389 IFNL2Q8IZJ0 200 aa19.96■□□□□ 0.79
HMGCL-208ENST00000509389 ZNF784Q8NCA9 323 aaPredicted RBP19.96■□□□□ 0.79
HMGCL-208ENST00000509389 FLAD1Q8NFF5 587 aa19.96■□□□□ 0.79
HMGCL-208ENST00000509389 TMOD3Q9NYL9 352 aa19.95■□□□□ 0.78
HMGCL-208ENST00000509389 UBR3Q6ZT12 1888 aa19.94■□□□□ 0.78
HMGCL-208ENST00000509389 AMIGO3Q86WK7 504 aa19.94■□□□□ 0.78
HMGCL-208ENST00000509389 PELP1Q8IZL8 1130 aaKnown RBP19.94■□□□□ 0.78
HMGCL-208ENST00000509389 AK7Q96M32 723 aa19.94■□□□□ 0.78
HMGCL-208ENST00000509389 IGSF1Q8N6C5 1336 aa19.93■□□□□ 0.78
HMGCL-208ENST00000509389 LOC102724428A0A0B4J2F2 783 aa19.93■□□□□ 0.78
HMGCL-208ENST00000509389 SIK1P57059 783 aa19.93■□□□□ 0.78
HMGCL-208ENST00000509389 ASAP1Q9ULH1 1129 aa19.93■□□□□ 0.78
HMGCL-208ENST00000509389 PLEKHG2Q9H7P9 1386 aa19.92■□□□□ 0.78
HMGCL-208ENST00000509389 SMIM5Q71RC9 77 aa19.92■□□□□ 0.78
HMGCL-208ENST00000509389 MORC1Q86VD1 984 aa19.91■□□□□ 0.78
HMGCL-208ENST00000509389 LINC00116Q8NCU8 138 aa19.91■□□□□ 0.78
HMGCL-208ENST00000509389 PHF14O94880 888 aa19.9■□□□□ 0.78
HMGCL-208ENST00000509389 ATG3Q9NT62 314 aa19.9■□□□□ 0.78
HMGCL-208ENST00000509389 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.89■□□□□ 0.77
HMGCL-208ENST00000509389 ITPK1Q13572 414 aa19.89■□□□□ 0.77
HMGCL-208ENST00000509389 ATP6V1AP38606 617 aa19.88■□□□□ 0.77
HMGCL-208ENST00000509389 YBX3P16989 372 aaKnown RBP eCLIP19.87■□□□□ 0.77
HMGCL-208ENST00000509389 SSFA2P28290 1259 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms