RNA–Protein interactions for RNA: ENST00000509366.5

GABRB1-203, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

TSL 1 (best)

Gene GABRB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-203ENST00000509366 MEGF6O75095 1541 aa19.81■□□□□ 0.76
GABRB1-203ENST00000509366 CARD14Q9BXL6 1004 aa19.81■□□□□ 0.76
GABRB1-203ENST00000509366 MYOM1P52179 1685 aa19.81■□□□□ 0.76
GABRB1-203ENST00000509366 TATP17735 454 aaPredicted RBP19.8■□□□□ 0.76
GABRB1-203ENST00000509366 PRIM1P49642 420 aaKnown RBP19.8■□□□□ 0.76
GABRB1-203ENST00000509366 HSP90AB2PQ58FF8 381 aa19.8■□□□□ 0.76
GABRB1-203ENST00000509366 SLC27A3Q5K4L6 730 aa19.8■□□□□ 0.76
GABRB1-203ENST00000509366 POLR3GLQ9BT43 218 aa19.8■□□□□ 0.76
GABRB1-203ENST00000509366 MTFR1LQ9H019 292 aa19.8■□□□□ 0.76
GABRB1-203ENST00000509366 ATF5Q9Y2D1 282 aaPredicted RBP19.8■□□□□ 0.76
GABRB1-203ENST00000509366 USHBP1Q8N6Y0 703 aa19.79■□□□□ 0.76
GABRB1-203ENST00000509366 PAPPAQ13219 1627 aa19.77■□□□□ 0.76
GABRB1-203ENST00000509366 PTGER2P43116 358 aa19.77■□□□□ 0.76
GABRB1-203ENST00000509366 CCER1Q8TC90 406 aaPredicted RBP19.77■□□□□ 0.76
GABRB1-203ENST00000509366 LRRC4BQ9NT99 713 aa19.77■□□□□ 0.76
GABRB1-203ENST00000509366 DOT1LQ8TEK3 1739 aa19.76■□□□□ 0.75
GABRB1-203ENST00000509366 EIF4G2P78344 907 aaKnown RBP eCLIP19.76■□□□□ 0.75
GABRB1-203ENST00000509366 SHANK3Q9BYB0 1731 aa19.76■□□□□ 0.75
GABRB1-203ENST00000509366 PPM1GO15355 546 aaPredicted RBP19.75■□□□□ 0.75
GABRB1-203ENST00000509366 ZNF827Q17R98 1081 aa19.75■□□□□ 0.75
GABRB1-203ENST00000509366 EMILIN1Q9Y6C2 1016 aa19.75■□□□□ 0.75
GABRB1-203ENST00000509366 PCDH11XQ9BZA7 1347 aa19.75■□□□□ 0.75
GABRB1-203ENST00000509366 PCDH11YQ9BZA8 1340 aa19.75■□□□□ 0.75
GABRB1-203ENST00000509366 AKT1S1Q96B36 256 aa19.72■□□□□ 0.75
GABRB1-203ENST00000509366 NSD2O96028 1365 aa19.71■□□□□ 0.75
GABRB1-203ENST00000509366 HMGB2P26583 209 aaKnown RBP19.71■□□□□ 0.75
GABRB1-203ENST00000509366 SLC16A10Q8TF71 515 aa19.71■□□□□ 0.75
GABRB1-203ENST00000509366 TFCP2L1Q9NZI6 479 aa19.71■□□□□ 0.75
GABRB1-203ENST00000509366 CCNL1Q9UK58 526 aaPredicted RBP19.71■□□□□ 0.75
GABRB1-203ENST00000509366 YY1P25490 414 aa19.7■□□□□ 0.74
GABRB1-203ENST00000509366 ARXQ96QS3 562 aa19.7■□□□□ 0.74
GABRB1-203ENST00000509366 FHDC1Q9C0D6 1143 aaPredicted RBP19.7■□□□□ 0.74
GABRB1-203ENST00000509366 LY75O60449 1722 aa19.7■□□□□ 0.74
GABRB1-203ENST00000509366 WASHC2AQ641Q2 1341 aa19.7■□□□□ 0.74
GABRB1-203ENST00000509366 HSPA5P11021 654 aaKnown RBP19.69■□□□□ 0.74
GABRB1-203ENST00000509366 SGIP1Q9BQI5 828 aa19.69■□□□□ 0.74
GABRB1-203ENST00000509366 ANKRD26Q9UPS8 1709 aa19.68■□□□□ 0.74
GABRB1-203ENST00000509366 KCNQ4P56696 695 aa19.68■□□□□ 0.74
GABRB1-203ENST00000509366 SYT17Q9BSW7 474 aa19.68■□□□□ 0.74
GABRB1-203ENST00000509366 SPG7Q9UQ90 795 aa19.68■□□□□ 0.74
GABRB1-203ENST00000509366 QSER1Q2KHR3 1735 aa19.68■□□□□ 0.74
GABRB1-203ENST00000509366 MAP2P11137 1827 aaKnown RBP19.67■□□□□ 0.74
GABRB1-203ENST00000509366 POLD1P28340 1107 aa19.67■□□□□ 0.74
GABRB1-203ENST00000509366 CYP27B1O15528 508 aa19.66■□□□□ 0.74
GABRB1-203ENST00000509366 TNNT2P45379 298 aaPredicted RBP19.66■□□□□ 0.74
GABRB1-203ENST00000509366 MPRIPQ6WCQ1 1025 aa19.66■□□□□ 0.74
GABRB1-203ENST00000509366 POLKQ9UBT6 870 aa19.66■□□□□ 0.74
GABRB1-203ENST00000509366 PNPLA7Q6ZV29 1317 aa19.66■□□□□ 0.74
GABRB1-203ENST00000509366 PANK3Q9H999 370 aa19.65■□□□□ 0.74
GABRB1-203ENST00000509366 NCAPD2Q15021 1401 aa19.65■□□□□ 0.74
GABRB1-203ENST00000509366 SMARCC1Q92922 1105 aaPredicted RBP19.64■□□□□ 0.73
GABRB1-203ENST00000509366 EYA1Q99502 592 aa19.64■□□□□ 0.73
GABRB1-203ENST00000509366 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.64■□□□□ 0.73
GABRB1-203ENST00000509366 PKD1L3Q7Z443 1732 aa19.64■□□□□ 0.73
GABRB1-203ENST00000509366 PALLDQ8WX93 1383 aa19.63■□□□□ 0.73
GABRB1-203ENST00000509366 MAP3K5Q99683 1374 aa19.63■□□□□ 0.73
GABRB1-203ENST00000509366 MSH5O43196 834 aa19.62■□□□□ 0.73
GABRB1-203ENST00000509366 NKX1-1Q15270 411 aaPredicted RBP19.61■□□□□ 0.73
GABRB1-203ENST00000509366 TUBGCP6Q96RT7 1819 aa19.6■□□□□ 0.73
GABRB1-203ENST00000509366 EIF4A2Q14240 407 aaKnown RBP19.6■□□□□ 0.73
GABRB1-203ENST00000509366 KLHL34Q8N239 644 aa19.6■□□□□ 0.73
GABRB1-203ENST00000509366 IFNL2Q8IZJ0 200 aa19.59■□□□□ 0.73
GABRB1-203ENST00000509366 FLAD1Q8NFF5 587 aa19.59■□□□□ 0.73
GABRB1-203ENST00000509366 C5P01031 1676 aa19.59■□□□□ 0.73
GABRB1-203ENST00000509366 PLEKHG2Q9H7P9 1386 aa19.58■□□□□ 0.73
GABRB1-203ENST00000509366 ITGB4P16144 1822 aa19.58■□□□□ 0.73
GABRB1-203ENST00000509366 MORC1Q86VD1 984 aa19.58■□□□□ 0.72
GABRB1-203ENST00000509366 TOGARAM1Q9Y4F4 1720 aa19.58■□□□□ 0.72
GABRB1-203ENST00000509366 COL23A1Q86Y22 540 aaPredicted RBP19.57■□□□□ 0.72
GABRB1-203ENST00000509366 PIGBQ92521 554 aa19.57■□□□□ 0.72
GABRB1-203ENST00000509366 TMOD3Q9NYL9 352 aa19.57■□□□□ 0.72
GABRB1-203ENST00000509366 KNSTRNQ9Y448 316 aa19.57■□□□□ 0.72
GABRB1-203ENST00000509366 COL24A1Q17RW2 1714 aa19.56■□□□□ 0.72
GABRB1-203ENST00000509366 PHKG2P15735 406 aa19.56■□□□□ 0.72
GABRB1-203ENST00000509366 AK7Q96M32 723 aa19.55■□□□□ 0.72
GABRB1-203ENST00000509366 IGSF1Q8N6C5 1336 aa19.54■□□□□ 0.72
GABRB1-203ENST00000509366 GPR162Q16538 588 aa19.54■□□□□ 0.72
GABRB1-203ENST00000509366 TAF1LQ8IZX4 1826 aa19.53■□□□□ 0.72
GABRB1-203ENST00000509366 LOC102724428A0A0B4J2F2 783 aa19.52■□□□□ 0.72
GABRB1-203ENST00000509366 HSP90AB1P08238 724 aaKnown RBP19.52■□□□□ 0.72
GABRB1-203ENST00000509366 SIK1P57059 783 aa19.52■□□□□ 0.72
GABRB1-203ENST00000509366 PLEKHO1Q53GL0 409 aaPredicted RBP19.52■□□□□ 0.72
GABRB1-203ENST00000509366 C4BP0C0L5 1744 aa19.51■□□□□ 0.71
GABRB1-203ENST00000509366 MSL1Q68DK7 614 aa19.51■□□□□ 0.71
GABRB1-203ENST00000509366 AMOTQ4VCS5 1084 aa19.5■□□□□ 0.71
GABRB1-203ENST00000509366 PELP1Q8IZL8 1130 aaKnown RBP19.5■□□□□ 0.71
GABRB1-203ENST00000509366 CHD4Q14839 1912 aa19.5■□□□□ 0.71
GABRB1-203ENST00000509366 DCAF5Q96JK2 942 aa19.49■□□□□ 0.71
GABRB1-203ENST00000509366 ASAP1Q9ULH1 1129 aa19.49■□□□□ 0.71
GABRB1-203ENST00000509366 ERVV-2B6SEH9 535 aa19.48■□□□□ 0.71
GABRB1-203ENST00000509366 ZNF530Q6P9A1 599 aaPredicted RBP19.48■□□□□ 0.71
GABRB1-203ENST00000509366 KIF7Q2M1P5 1343 aa19.48■□□□□ 0.71
GABRB1-203ENST00000509366 UTRNP46939 3433 aa19.47■□□□□ 0.71
GABRB1-203ENST00000509366 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.47■□□□□ 0.71
GABRB1-203ENST00000509366 PHF14O94880 888 aa19.47■□□□□ 0.71
GABRB1-203ENST00000509366 SSFA2P28290 1259 aa19.47■□□□□ 0.71
GABRB1-203ENST00000509366 ATP6V1AP38606 617 aa19.47■□□□□ 0.71
GABRB1-203ENST00000509366 C1orf141Q5JVX7 400 aa19.46■□□□□ 0.71
GABRB1-203ENST00000509366 LINC00116Q8NCU8 138 aa19.46■□□□□ 0.71
GABRB1-203ENST00000509366 NLGN2Q8NFZ4 835 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms