RNA–Protein interactions for RNA: ENST00000509281.1

SNX2-208, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-208ENST00000509281 PRSS36Q5K4E3 855 aa8.38□□□□□ -1.07
SNX2-208ENST00000509281 PIK3R2O00459 728 aa8.37□□□□□ -1.07
SNX2-208ENST00000509281 HYAL3O43820 417 aaPredicted RBP8.37□□□□□ -1.07
SNX2-208ENST00000509281 ERFEQ4G0M1 354 aa8.37□□□□□ -1.07
SNX2-208ENST00000509281 SPIRE2Q8WWL2 714 aa8.37□□□□□ -1.07
SNX2-208ENST00000509281 FMNL2Q96PY5 1086 aa8.37□□□□□ -1.07
SNX2-208ENST00000509281 NOP53Q9NZM5 478 aaKnown RBP8.37□□□□□ -1.07
SNX2-208ENST00000509281 GDF2Q9UK05 429 aaPredicted RBP8.37□□□□□ -1.07
SNX2-208ENST00000509281 MAGEB6P1A0A0J9YX57 407 aa8.36□□□□□ -1.07
SNX2-208ENST00000509281 H7C1W4 665 aa8.36□□□□□ -1.07
SNX2-208ENST00000509281 PRICKLE2Q7Z3G6 844 aa8.36□□□□□ -1.07
SNX2-208ENST00000509281 MAP2K5Q13163 448 aa8.35□□□□□ -1.07
SNX2-208ENST00000509281 GPCPD1Q9NPB8 672 aa8.35□□□□□ -1.07
SNX2-208ENST00000509281 ADH1AP07327 375 aa8.34□□□□□ -1.07
SNX2-208ENST00000509281 KRTAP4-5Q9BYR2 181 aa8.34□□□□□ -1.07
SNX2-208ENST00000509281 DYRK1BQ9Y463 629 aa8.34□□□□□ -1.07
SNX2-208ENST00000509281 TXKP42681 527 aa8.33□□□□□ -1.08
SNX2-208ENST00000509281 DHX9Q08211 1270 aaKnown RBP8.33□□□□□ -1.08
SNX2-208ENST00000509281 FZD5Q13467 585 aa8.33□□□□□ -1.08
SNX2-208ENST00000509281 LAMC2Q13753 1193 aa8.33□□□□□ -1.08
SNX2-208ENST00000509281 GIGYF2Q6Y7W6 1299 aaKnown RBP8.33□□□□□ -1.08
SNX2-208ENST00000509281 PER1O15534 1290 aaPredicted RBP8.32□□□□□ -1.08
SNX2-208ENST00000509281 THBS1P07996 1170 aa8.32□□□□□ -1.08
SNX2-208ENST00000509281 PTGIRP43119 386 aa8.32□□□□□ -1.08
SNX2-208ENST00000509281 INTS6LQ5JSJ4 861 aaKnown RBP8.32□□□□□ -1.08
SNX2-208ENST00000509281 NBPF14Q5TI25 921 aa8.32□□□□□ -1.08
SNX2-208ENST00000509281 GOLGA6L1Q8N7Z2 621 aa8.32□□□□□ -1.08
SNX2-208ENST00000509281 KCTD15Q96SI1 283 aaPredicted RBP8.32□□□□□ -1.08
SNX2-208ENST00000509281 CARD14Q9BXL6 1004 aa8.32□□□□□ -1.08
SNX2-208ENST00000509281 AMPD1P23109 780 aa8.31□□□□□ -1.08
SNX2-208ENST00000509281 RNF144AP50876 292 aaPredicted RBP8.31□□□□□ -1.08
SNX2-208ENST00000509281 SLCO4C1Q6ZQN7 724 aa8.31□□□□□ -1.08
SNX2-208ENST00000509281 ARMC2Q8NEN0 867 aa8.3□□□□□ -1.08
SNX2-208ENST00000509281 IRF6O14896 467 aa8.29□□□□□ -1.08
SNX2-208ENST00000509281 PAX4O43316 350 aa8.29□□□□□ -1.08
SNX2-208ENST00000509281 GPIHBP1Q8IV16 184 aa8.29□□□□□ -1.08
SNX2-208ENST00000509281 BTBD6Q96KE9 485 aa8.29□□□□□ -1.08
SNX2-208ENST00000509281 CFHR5Q9BXR6 569 aa8.29□□□□□ -1.08
SNX2-208ENST00000509281 COL17A1Q9UMD9 1497 aaPredicted RBP8.28□□□□□ -1.08
SNX2-208ENST00000509281 CLCN1P35523 988 aa8.28□□□□□ -1.08
SNX2-208ENST00000509281 ADD1P35611 737 aaKnown RBP8.28□□□□□ -1.08
SNX2-208ENST00000509281 SMYD5Q6GMV2 418 aa8.28□□□□□ -1.08
SNX2-208ENST00000509281 RIC3Q7Z5B4 369 aa8.28□□□□□ -1.08
SNX2-208ENST00000509281 GAS2L1Q99501 681 aaPredicted RBP8.28□□□□□ -1.08
SNX2-208ENST00000509281 NUCKS1Q9H1E3 243 aaKnown RBP8.28□□□□□ -1.08
SNX2-208ENST00000509281 LILRA1O75019 489 aa8.27□□□□□ -1.09
SNX2-208ENST00000509281 ZNF784Q8NCA9 323 aaPredicted RBP8.27□□□□□ -1.09
SNX2-208ENST00000509281 TMPRSS4Q9NRS4 437 aa8.27□□□□□ -1.09
SNX2-208ENST00000509281 SPATA31C1P0DKV0 1188 aa8.24□□□□□ -1.09
SNX2-208ENST00000509281 EPXP11678 715 aa8.24□□□□□ -1.09
SNX2-208ENST00000509281 TRIM11Q96F44 468 aa8.24□□□□□ -1.09
SNX2-208ENST00000509281 GGA1Q9UJY5 639 aa8.24□□□□□ -1.09
SNX2-208ENST00000509281 CDV3Q9UKY7 258 aaKnown RBP8.24□□□□□ -1.09
SNX2-208ENST00000509281 C2CD2LO14523 706 aa8.23□□□□□ -1.09
SNX2-208ENST00000509281 SLC10A4Q96EP9 437 aa8.22□□□□□ -1.09
SNX2-208ENST00000509281 PCDHB15Q9Y5E8 787 aa8.22□□□□□ -1.09
SNX2-208ENST00000509281 HRCP23327 699 aa8.21□□□□□ -1.1
SNX2-208ENST00000509281 GJA5P36382 358 aa8.21□□□□□ -1.1
SNX2-208ENST00000509281 UBAP2LQ14157 1087 aaKnown RBP8.21□□□□□ -1.1
SNX2-208ENST00000509281 GPC1P35052 558 aa8.2□□□□□ -1.1
SNX2-208ENST00000509281 GPKOWQ92917 476 aaPredicted RBP eCLIP8.2□□□□□ -1.1
SNX2-208ENST00000509281 CCDC102AQ96A19 550 aa8.2□□□□□ -1.1
SNX2-208ENST00000509281 POU4F2Q12837 409 aa8.19□□□□□ -1.1
SNX2-208ENST00000509281 RSBN1LQ6PCB5 846 aaPredicted RBP8.19□□□□□ -1.1
SNX2-208ENST00000509281 SLC24A1O60721 1099 aa8.18□□□□□ -1.1
SNX2-208ENST00000509281 KRTAP5-3Q6L8H2 238 aa8.18□□□□□ -1.1
SNX2-208ENST00000509281 CHSY3Q70JA7 882 aa8.17□□□□□ -1.1
SNX2-208ENST00000509281 RNF135Q8IUD6 432 aa8.17□□□□□ -1.1
SNX2-208ENST00000509281 F11P03951 625 aa8.16□□□□□ -1.1
SNX2-208ENST00000509281 LCE4AQ5TA78 99 aa8.16□□□□□ -1.1
SNX2-208ENST00000509281 NBPF10Q6P3W6 841 aaKnown RBP8.16□□□□□ -1.1
SNX2-208ENST00000509281 MINK1Q8N4C8 1332 aaPredicted RBP8.16□□□□□ -1.1
SNX2-208ENST00000509281 NBPF15Q8N660 670 aa8.16□□□□□ -1.1
SNX2-208ENST00000509281 PLVAPQ9BX97 442 aa8.16□□□□□ -1.1
SNX2-208ENST00000509281 ZBTB3Q9H5J0 574 aa8.16□□□□□ -1.1
SNX2-208ENST00000509281 PHF24Q9UPV7 400 aa8.16□□□□□ -1.1
SNX2-208ENST00000509281 H2AFB1P0C5Y9 115 aa8.15□□□□□ -1.1
SNX2-208ENST00000509281 H2AFB2P0C5Z0 115 aa8.15□□□□□ -1.1
SNX2-208ENST00000509281 BMP4P12644 408 aa8.14□□□□□ -1.11
SNX2-208ENST00000509281 SSTR3P32745 418 aaPredicted RBP8.14□□□□□ -1.11
SNX2-208ENST00000509281 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.13□□□□□ -1.11
SNX2-208ENST00000509281 CABLES1Q8TDN4 633 aa8.13□□□□□ -1.11
SNX2-208ENST00000509281 ARHGAP9Q9BRR9 750 aa8.13□□□□□ -1.11
SNX2-208ENST00000509281 SPATA31C2B4DYI2 1134 aa8.12□□□□□ -1.11
SNX2-208ENST00000509281 ERVH48-1M5A8F1 160 aa8.12□□□□□ -1.11
SNX2-208ENST00000509281 ARAFP10398 606 aa8.11□□□□□ -1.11
SNX2-208ENST00000509281 WDR44Q5JSH3 913 aa8.11□□□□□ -1.11
SNX2-208ENST00000509281 OCSTAMPQ9BR26 566 aa8.11□□□□□ -1.11
SNX2-208ENST00000509281 ELNP15502 786 aa8.1□□□□□ -1.11
SNX2-208ENST00000509281 CTBSQ01459 385 aa8.1□□□□□ -1.11
SNX2-208ENST00000509281 PDXDC2PQ6P474 469 aa8.1□□□□□ -1.11
SNX2-208ENST00000509281 GRIP2Q9C0E4 1043 aa8.1□□□□□ -1.11
SNX2-208ENST00000509281 TIMMDC1Q9NPL8 285 aa8.1□□□□□ -1.11
SNX2-208ENST00000509281 NDFIP2Q9NV92 336 aa8.1□□□□□ -1.11
SNX2-208ENST00000509281 NEURL1BA8MQ27 555 aa8.09□□□□□ -1.11
SNX2-208ENST00000509281 TULP1O00294 542 aaPredicted RBP8.09□□□□□ -1.11
SNX2-208ENST00000509281 JAG1P78504 1218 aa8.09□□□□□ -1.11
SNX2-208ENST00000509281 ATXN7L1Q9ULK2 861 aaPredicted RBP8.09□□□□□ -1.11
SNX2-208ENST00000509281 MEN1O00255 615 aa8.07□□□□□ -1.12
SNX2-208ENST00000509281 FGFR3P22607 806 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms