RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 TSEN34Q9BSV6 310 aaKnown RBP8.72□□□□□ -1.01
NFKB1-208ENST00000509165 CYLDQ9NQC7 956 aa8.72□□□□□ -1.01
NFKB1-208ENST00000509165 PCDHB11Q9Y5F2 797 aa8.72□□□□□ -1.01
NFKB1-208ENST00000509165 ADH1AP07327 375 aa8.71□□□□□ -1.02
NFKB1-208ENST00000509165 SEMA3FQ13275 785 aa8.71□□□□□ -1.02
NFKB1-208ENST00000509165 SCARF1Q14162 830 aa8.71□□□□□ -1.02
NFKB1-208ENST00000509165 AGBL1Q96MI9 1066 aa8.71□□□□□ -1.02
NFKB1-208ENST00000509165 CDCA7Q9BWT1 371 aaPredicted RBP8.71□□□□□ -1.02
NFKB1-208ENST00000509165 GTF3C3Q9Y5Q9 886 aa8.71□□□□□ -1.02
NFKB1-208ENST00000509165 GDF11O95390 407 aa8.7□□□□□ -1.02
NFKB1-208ENST00000509165 C6orf118Q5T5N4 469 aa8.7□□□□□ -1.02
NFKB1-208ENST00000509165 CC2D2BQ6DHV5 1058 aa8.7□□□□□ -1.02
NFKB1-208ENST00000509165 SPINT1O43278 529 aa8.69□□□□□ -1.02
NFKB1-208ENST00000509165 TRAK2O60296 914 aa8.69□□□□□ -1.02
NFKB1-208ENST00000509165 BMP2P12643 396 aa8.69□□□□□ -1.02
NFKB1-208ENST00000509165 SLFNL1Q499Z3 407 aa8.69□□□□□ -1.02
NFKB1-208ENST00000509165 PIK3CDO00329 1044 aa8.68□□□□□ -1.02
NFKB1-208ENST00000509165 UPP2O95045 317 aa8.68□□□□□ -1.02
NFKB1-208ENST00000509165 RELBQ01201 579 aa8.68□□□□□ -1.02
NFKB1-208ENST00000509165 RASSF7Q02833 373 aa8.68□□□□□ -1.02
NFKB1-208ENST00000509165 RNF135Q8IUD6 432 aa8.68□□□□□ -1.02
NFKB1-208ENST00000509165 OSBPL3Q9H4L5 887 aa8.68□□□□□ -1.02
NFKB1-208ENST00000509165 SOS2Q07890 1332 aaPredicted RBP8.68□□□□□ -1.02
NFKB1-208ENST00000509165 PTGIRP43119 386 aa8.67□□□□□ -1.02
NFKB1-208ENST00000509165 XP32Q5T750 250 aa8.66□□□□□ -1.02
NFKB1-208ENST00000509165 TRIM52Q96A61 297 aa8.66□□□□□ -1.02
NFKB1-208ENST00000509165 SOBPA7XYQ1 873 aa8.65□□□□□ -1.02
NFKB1-208ENST00000509165 HDGFL1Q5TGJ6 251 aa8.65□□□□□ -1.02
NFKB1-208ENST00000509165 PLPP7Q8NBV4 271 aa8.65□□□□□ -1.02
NFKB1-208ENST00000509165 UCN2Q96RP3 112 aa8.65□□□□□ -1.02
NFKB1-208ENST00000509165 ZNF395Q9H8N7 513 aaPredicted RBP8.65□□□□□ -1.02
NFKB1-208ENST00000509165 DNMT3LQ9UJW3 386 aa8.65□□□□□ -1.02
NFKB1-208ENST00000509165 DOLKQ9UPQ8 538 aa8.65□□□□□ -1.02
NFKB1-208ENST00000509165 ATP5J2-PTCD1G3V325 749 aa8.64□□□□□ -1.03
NFKB1-208ENST00000509165 CTSOP43234 321 aaPredicted RBP8.64□□□□□ -1.03
NFKB1-208ENST00000509165 MAP7D1Q3KQU3 841 aa8.64□□□□□ -1.03
NFKB1-208ENST00000509165 NFATC2IPQ8NCF5 419 aa8.64□□□□□ -1.03
NFKB1-208ENST00000509165 INSM2Q96T92 566 aaPredicted RBP8.64□□□□□ -1.03
NFKB1-208ENST00000509165 TTLL8A6PVC2 850 aa8.62□□□□□ -1.03
NFKB1-208ENST00000509165 VSIG8P0DPA2 414 aa8.62□□□□□ -1.03
NFKB1-208ENST00000509165 FOXD4L5Q5VV16 416 aaPredicted RBP8.62□□□□□ -1.03
NFKB1-208ENST00000509165 CYP2U1Q7Z449 544 aa8.62□□□□□ -1.03
NFKB1-208ENST00000509165 GLMNQ92990 594 aa8.62□□□□□ -1.03
NFKB1-208ENST00000509165 A0A1W2PRU2 124 aa8.61□□□□□ -1.03
NFKB1-208ENST00000509165 USP4Q13107 963 aa8.61□□□□□ -1.03
NFKB1-208ENST00000509165 OXLD1Q5BKU9 147 aa8.61□□□□□ -1.03
NFKB1-208ENST00000509165 RNF217Q8TC41 542 aa8.61□□□□□ -1.03
NFKB1-208ENST00000509165 MAN1A2O60476 641 aa8.6□□□□□ -1.03
NFKB1-208ENST00000509165 MYCP01106 439 aaPredicted RBP8.6□□□□□ -1.03
NFKB1-208ENST00000509165 SKIP12755 728 aa8.6□□□□□ -1.03
NFKB1-208ENST00000509165 GPAT2Q6NUI2 795 aa8.6□□□□□ -1.03
NFKB1-208ENST00000509165 TBC1D9Q6ZT07 1266 aa8.6□□□□□ -1.03
NFKB1-208ENST00000509165 ZMYND15Q9H091 742 aa8.6□□□□□ -1.03
NFKB1-208ENST00000509165 FIGNL2A6NMB9 653 aa8.59□□□□□ -1.03
NFKB1-208ENST00000509165 GNRH1P01148 92 aa8.59□□□□□ -1.03
NFKB1-208ENST00000509165 RNF144AP50876 292 aaPredicted RBP8.59□□□□□ -1.03
NFKB1-208ENST00000509165 CLN3Q13286 438 aa8.59□□□□□ -1.03
NFKB1-208ENST00000509165 ARHGEF10LQ9HCE6 1279 aa8.59□□□□□ -1.03
NFKB1-208ENST00000509165 USP17L5A8MUK1 530 aa8.58□□□□□ -1.04
NFKB1-208ENST00000509165 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.58□□□□□ -1.04
NFKB1-208ENST00000509165 SIRT1Q96EB6 747 aa8.58□□□□□ -1.04
NFKB1-208ENST00000509165 POLMQ9NP87 494 aaPredicted RBP8.58□□□□□ -1.04
NFKB1-208ENST00000509165 HRH3Q9Y5N1 445 aa8.58□□□□□ -1.04
NFKB1-208ENST00000509165 LZTS3O60299 673 aaPredicted RBP8.57□□□□□ -1.04
NFKB1-208ENST00000509165 STAU1O95793 577 aaKnown RBP8.57□□□□□ -1.04
NFKB1-208ENST00000509165 IL2RAP01589 272 aa8.57□□□□□ -1.04
NFKB1-208ENST00000509165 GPC1P35052 558 aa8.57□□□□□ -1.04
NFKB1-208ENST00000509165 NCOA4Q13772 614 aa8.57□□□□□ -1.04
NFKB1-208ENST00000509165 PLEKHM2Q8IWE5 1019 aa8.57□□□□□ -1.04
NFKB1-208ENST00000509165 RAB6BQ9NRW1 208 aa8.57□□□□□ -1.04
NFKB1-208ENST00000509165 PCDHGA11Q9Y5H2 935 aa8.57□□□□□ -1.04
NFKB1-208ENST00000509165 MEN1O00255 615 aa8.56□□□□□ -1.04
NFKB1-208ENST00000509165 ATP9BO43861 1147 aa8.56□□□□□ -1.04
NFKB1-208ENST00000509165 XAGE2Q96GT9 111 aa8.56□□□□□ -1.04
NFKB1-208ENST00000509165 ESF1Q9H501 851 aaKnown RBP8.56□□□□□ -1.04
NFKB1-208ENST00000509165 ZNF777Q9ULD5 760 aaPredicted RBP8.56□□□□□ -1.04
NFKB1-208ENST00000509165 ADAMTS8Q9UP79 889 aa8.56□□□□□ -1.04
NFKB1-208ENST00000509165 USP17L3A6NCW0 530 aa8.55□□□□□ -1.04
NFKB1-208ENST00000509165 USP17L4A6NCW7 530 aa8.55□□□□□ -1.04
NFKB1-208ENST00000509165 SCNN1DP51172 638 aa8.55□□□□□ -1.04
NFKB1-208ENST00000509165 EML3Q32P44 896 aa8.55□□□□□ -1.04
NFKB1-208ENST00000509165 USP17L2Q6R6M4 530 aa8.55□□□□□ -1.04
NFKB1-208ENST00000509165 USP17L1Q7RTZ2 530 aa8.55□□□□□ -1.04
NFKB1-208ENST00000509165 DEPDC4Q8N2C3 294 aa8.55□□□□□ -1.04
NFKB1-208ENST00000509165 CALR3Q96L12 384 aaKnown RBP8.55□□□□□ -1.04
NFKB1-208ENST00000509165 ESYT1Q9BSJ8 1104 aa8.55□□□□□ -1.04
NFKB1-208ENST00000509165 KRTAP4-8Q9BYQ9 185 aa8.55□□□□□ -1.04
NFKB1-208ENST00000509165 GRIP2Q9C0E4 1043 aa8.55□□□□□ -1.04
NFKB1-208ENST00000509165 ETNK1Q9HBU6 452 aa8.55□□□□□ -1.04
NFKB1-208ENST00000509165 RNF225M0QZC1 329 aaPredicted RBP8.54□□□□□ -1.04
NFKB1-208ENST00000509165 PTSQ03393 145 aa8.54□□□□□ -1.04
NFKB1-208ENST00000509165 CNKSR1Q969H4 720 aa8.54□□□□□ -1.04
NFKB1-208ENST00000509165 SLC35F4A4IF30 521 aa8.53□□□□□ -1.04
NFKB1-208ENST00000509165 LYSMD3Q7Z3D4 306 aa8.53□□□□□ -1.04
NFKB1-208ENST00000509165 PPP1R12CQ9BZL4 782 aa8.53□□□□□ -1.04
NFKB1-208ENST00000509165 FHDC1Q9C0D6 1143 aaPredicted RBP8.53□□□□□ -1.04
NFKB1-208ENST00000509165 TFIP11Q9UBB9 837 aaKnown RBP8.53□□□□□ -1.04
NFKB1-208ENST00000509165 NOD1Q9Y239 953 aa8.53□□□□□ -1.04
NFKB1-208ENST00000509165 MAFBQ9Y5Q3 323 aaPredicted RBP8.53□□□□□ -1.04
NFKB1-208ENST00000509165 SENP3-EIF4A1A0A087X0R7 540 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 644.7 ms