RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 SCTRP47872 440 aa10.7□□□□□ -0.7
LINC01088-205ENST00000509088 KCNMA1Q12791 1236 aa10.7□□□□□ -0.7
LINC01088-205ENST00000509088 SV2AQ7L0J3 742 aa10.7□□□□□ -0.7
LINC01088-205ENST00000509088 BANK1Q8NDB2 785 aa10.7□□□□□ -0.7
LINC01088-205ENST00000509088 GAS6Q14393 721 aa10.69□□□□□ -0.7
LINC01088-205ENST00000509088 SNRKQ9NRH2 765 aa10.69□□□□□ -0.7
LINC01088-205ENST00000509088 RHOQP17081 205 aa10.68□□□□□ -0.7
LINC01088-205ENST00000509088 PRICKLE2Q7Z3G6 844 aa10.68□□□□□ -0.7
LINC01088-205ENST00000509088 ADAMTS8Q9UP79 889 aa10.68□□□□□ -0.7
LINC01088-205ENST00000509088 CC2D2BQ6DHV5 1058 aa10.67□□□□□ -0.7
LINC01088-205ENST00000509088 A0A1W2PRU2 124 aa10.66□□□□□ -0.7
LINC01088-205ENST00000509088 TRAK2O60296 914 aa10.66□□□□□ -0.7
LINC01088-205ENST00000509088 ARHGEF15O94989 841 aa10.66□□□□□ -0.7
LINC01088-205ENST00000509088 OSBPL3Q9H4L5 887 aa10.66□□□□□ -0.7
LINC01088-205ENST00000509088 GPC1P35052 558 aa10.65□□□□□ -0.7
LINC01088-205ENST00000509088 MEN1O00255 615 aa10.64□□□□□ -0.71
LINC01088-205ENST00000509088 CCDC125Q86Z20 511 aa10.64□□□□□ -0.71
LINC01088-205ENST00000509088 ZNF837Q96EG3 531 aaPredicted RBP10.64□□□□□ -0.71
LINC01088-205ENST00000509088 NDUFB9Q9Y6M9 179 aa10.64□□□□□ -0.71
LINC01088-205ENST00000509088 MCCD1P59942 119 aaPredicted RBP10.62□□□□□ -0.71
LINC01088-205ENST00000509088 RNF20Q5VTR2 975 aa10.62□□□□□ -0.71
LINC01088-205ENST00000509088 SVOPQ8N4V2 548 aa10.62□□□□□ -0.71
LINC01088-205ENST00000509088 GRIP2Q9C0E4 1043 aa10.62□□□□□ -0.71
LINC01088-205ENST00000509088 PCDHB11Q9Y5F2 797 aa10.62□□□□□ -0.71
LINC01088-205ENST00000509088 ADAMTS2O95450 1211 aa10.61□□□□□ -0.71
LINC01088-205ENST00000509088 CLN3Q13286 438 aa10.61□□□□□ -0.71
LINC01088-205ENST00000509088 DBN1Q16643 649 aa10.61□□□□□ -0.71
LINC01088-205ENST00000509088 POU4F2Q12837 409 aa10.6□□□□□ -0.71
LINC01088-205ENST00000509088 LYPD4Q6UWN0 246 aa10.6□□□□□ -0.71
LINC01088-205ENST00000509088 TRIM22Q8IYM9 498 aa10.6□□□□□ -0.71
LINC01088-205ENST00000509088 CCDC85AQ96PX6 553 aaPredicted RBP10.6□□□□□ -0.71
LINC01088-205ENST00000509088 ARHGEF10LQ9HCE6 1279 aa10.6□□□□□ -0.71
LINC01088-205ENST00000509088 SRSF11Q05519 484 aaKnown RBP10.59□□□□□ -0.71
LINC01088-205ENST00000509088 CYP2U1Q7Z449 544 aa10.59□□□□□ -0.71
LINC01088-205ENST00000509088 CDCA7Q9BWT1 371 aaPredicted RBP10.59□□□□□ -0.71
LINC01088-205ENST00000509088 RASSF7Q02833 373 aa10.58□□□□□ -0.72
LINC01088-205ENST00000509088 NBPF10Q6P3W6 841 aaKnown RBP10.58□□□□□ -0.72
LINC01088-205ENST00000509088 NBPF15Q8N660 670 aa10.58□□□□□ -0.72
LINC01088-205ENST00000509088 TRIM52Q96A61 297 aa10.58□□□□□ -0.72
LINC01088-205ENST00000509088 DYRK1BQ9Y463 629 aa10.58□□□□□ -0.72
LINC01088-205ENST00000509088 SPATA31C2B4DYI2 1134 aa10.57□□□□□ -0.72
LINC01088-205ENST00000509088 GPR25O00155 361 aa10.57□□□□□ -0.72
LINC01088-205ENST00000509088 KCTD17Q8N5Z5 321 aa10.57□□□□□ -0.72
LINC01088-205ENST00000509088 RAB6BQ9NRW1 208 aa10.57□□□□□ -0.72
LINC01088-205ENST00000509088 CEP126Q9P2H0 1117 aa10.57□□□□□ -0.72
LINC01088-205ENST00000509088 TBC1D2BQ9UPU7 963 aa10.57□□□□□ -0.72
LINC01088-205ENST00000509088 IL2RAP01589 272 aa10.56□□□□□ -0.72
LINC01088-205ENST00000509088 THBS1P07996 1170 aa10.56□□□□□ -0.72
LINC01088-205ENST00000509088 IRF5Q13568 498 aa10.56□□□□□ -0.72
LINC01088-205ENST00000509088 HRH3Q9Y5N1 445 aa10.56□□□□□ -0.72
LINC01088-205ENST00000509088 TPRNQ4KMQ1 711 aa10.55□□□□□ -0.72
LINC01088-205ENST00000509088 ZNF592Q92610 1267 aa10.55□□□□□ -0.72
LINC01088-205ENST00000509088 GMCL1Q96IK5 515 aa10.55□□□□□ -0.72
LINC01088-205ENST00000509088 NLRP3Q96P20 1036 aa10.55□□□□□ -0.72
LINC01088-205ENST00000509088 ZNF330Q9Y3S2 320 aaPredicted RBP10.55□□□□□ -0.72
LINC01088-205ENST00000509088 CELA2BP08218 269 aaPredicted RBP10.54□□□□□ -0.72
LINC01088-205ENST00000509088 TSGA10IPQ3SY00 556 aa10.54□□□□□ -0.72
LINC01088-205ENST00000509088 SLC27A3Q5K4L6 730 aa10.54□□□□□ -0.72
LINC01088-205ENST00000509088 PHTF2Q8N3S3 785 aa10.54□□□□□ -0.72
LINC01088-205ENST00000509088 GDF11O95390 407 aa10.53□□□□□ -0.72
LINC01088-205ENST00000509088 RIPOR1Q6ZS17 1223 aa10.53□□□□□ -0.72
LINC01088-205ENST00000509088 TMEM151AQ8N4L1 468 aa10.53□□□□□ -0.72
LINC01088-205ENST00000509088 MBIPQ9NS73 344 aa10.53□□□□□ -0.72
LINC01088-205ENST00000509088 GNRH1P01148 92 aa10.52□□□□□ -0.73
LINC01088-205ENST00000509088 WDR44Q5JSH3 913 aa10.52□□□□□ -0.73
LINC01088-205ENST00000509088 CNKSR1Q969H4 720 aa10.52□□□□□ -0.73
LINC01088-205ENST00000509088 GTPBP3Q969Y2 492 aaKnown RBP10.52□□□□□ -0.73
LINC01088-205ENST00000509088 GAS2L1Q99501 681 aaPredicted RBP10.52□□□□□ -0.73
LINC01088-205ENST00000509088 ESYT1Q9BSJ8 1104 aa10.52□□□□□ -0.73
LINC01088-205ENST00000509088 FHDC1Q9C0D6 1143 aaPredicted RBP10.52□□□□□ -0.73
LINC01088-205ENST00000509088 RNF225M0QZC1 329 aaPredicted RBP10.51□□□□□ -0.73
LINC01088-205ENST00000509088 APBB1O00213 710 aa10.51□□□□□ -0.73
LINC01088-205ENST00000509088 WASLO00401 505 aaPredicted RBP10.51□□□□□ -0.73
LINC01088-205ENST00000509088 IGF1RP08069 1367 aa10.51□□□□□ -0.73
LINC01088-205ENST00000509088 CENPCQ03188 943 aa10.5□□□□□ -0.73
LINC01088-205ENST00000509088 TAS1R3Q7RTX0 852 aa10.5□□□□□ -0.73
LINC01088-205ENST00000509088 STAU1O95793 577 aaKnown RBP10.49□□□□□ -0.73
LINC01088-205ENST00000509088 IRS1P35568 1242 aa10.49□□□□□ -0.73
LINC01088-205ENST00000509088 XAGE2Q96GT9 111 aa10.49□□□□□ -0.73
LINC01088-205ENST00000509088 TIMMDC1Q9NPL8 285 aa10.49□□□□□ -0.73
LINC01088-205ENST00000509088 LOC100996750A0A140TA64 210 aa10.48□□□□□ -0.73
LINC01088-205ENST00000509088 ACDQ96AP0 544 aa10.48□□□□□ -0.73
LINC01088-205ENST00000509088 KRTAP4-6Q9BYQ5 205 aa10.48□□□□□ -0.73
LINC01088-205ENST00000509088 CHIC2Q9UKJ5 165 aa10.48□□□□□ -0.73
LINC01088-205ENST00000509088 H7C1W4 665 aa10.47□□□□□ -0.73
LINC01088-205ENST00000509088 UBAP2LQ14157 1087 aaKnown RBP10.47□□□□□ -0.73
LINC01088-205ENST00000509088 F11P03951 625 aa10.46□□□□□ -0.73
LINC01088-205ENST00000509088 NUCKS1Q9H1E3 243 aaKnown RBP10.46□□□□□ -0.73
LINC01088-205ENST00000509088 ETNK1Q9HBU6 452 aa10.45□□□□□ -0.74
LINC01088-205ENST00000509088 MYCP01106 439 aaPredicted RBP10.44□□□□□ -0.74
LINC01088-205ENST00000509088 PHKA2P46019 1235 aa10.44□□□□□ -0.74
LINC01088-205ENST00000509088 MARSP56192 900 aaKnown RBP10.44□□□□□ -0.74
LINC01088-205ENST00000509088 MAP3K10Q02779 954 aa10.44□□□□□ -0.74
LINC01088-205ENST00000509088 FOXR1Q6PIV2 292 aa10.44□□□□□ -0.74
LINC01088-205ENST00000509088 VAC14Q08AM6 782 aa10.43□□□□□ -0.74
LINC01088-205ENST00000509088 C4orf17Q53FE4 359 aa10.43□□□□□ -0.74
LINC01088-205ENST00000509088 SCARF2Q96GP6 870 aaPredicted RBP10.43□□□□□ -0.74
LINC01088-205ENST00000509088 ZSCAN10Q96SZ4 725 aaPredicted RBP10.43□□□□□ -0.74
LINC01088-205ENST00000509088 GPAMQ9HCL2 828 aa10.43□□□□□ -0.74
LINC01088-205ENST00000509088 DOLKQ9UPQ8 538 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms