RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 USP19O94966 1318 aa11.71□□□□□ -0.53
HTT-205ENST00000509043 SOX12O15370 315 aa11.71□□□□□ -0.53
HTT-205ENST00000509043 MTHFSDQ2M296 383 aaKnown RBP11.71□□□□□ -0.53
HTT-205ENST00000509043 TMEM57Q8N5G2 664 aa11.71□□□□□ -0.53
HTT-205ENST00000509043 MAP3K5Q99683 1374 aa11.7□□□□□ -0.54
HTT-205ENST00000509043 FAM83GA6ND36 823 aa11.7□□□□□ -0.54
HTT-205ENST00000509043 GNAT3A8MTJ3 354 aa11.7□□□□□ -0.54
HTT-205ENST00000509043 C8orf58Q8NAV2 365 aa11.7□□□□□ -0.54
HTT-205ENST00000509043 ANP32EQ9BTT0 268 aa11.7□□□□□ -0.54
HTT-205ENST00000509043 LMTK3Q96Q04 1460 aa11.7□□□□□ -0.54
HTT-205ENST00000509043 NCAPD2Q15021 1401 aa11.69□□□□□ -0.54
HTT-205ENST00000509043 LTN1O94822 1766 aa11.69□□□□□ -0.54
HTT-205ENST00000509043 TRPM3Q9HCF6 1732 aaPredicted RBP11.69□□□□□ -0.54
HTT-205ENST00000509043 ATF3P18847 181 aa11.69□□□□□ -0.54
HTT-205ENST00000509043 SMC5Q8IY18 1101 aa11.69□□□□□ -0.54
HTT-205ENST00000509043 TSPYL6Q8N831 410 aa11.69□□□□□ -0.54
HTT-205ENST00000509043 TNNQ9UQP3 1299 aa11.69□□□□□ -0.54
HTT-205ENST00000509043 ABCC6O95255 1503 aa11.69□□□□□ -0.54
HTT-205ENST00000509043 C8orf34Q49A92 452 aa11.68□□□□□ -0.54
HTT-205ENST00000509043 MCM10Q7L590 875 aa11.68□□□□□ -0.54
HTT-205ENST00000509043 CADPS2Q86UW7 1296 aa11.68□□□□□ -0.54
HTT-205ENST00000509043 GCC1Q96CN9 775 aa11.68□□□□□ -0.54
HTT-205ENST00000509043 NOP58Q9Y2X3 529 aaKnown RBP11.68□□□□□ -0.54
HTT-205ENST00000509043 OVOS2A0A0G2JMS6 1433 aa11.68□□□□□ -0.54
HTT-205ENST00000509043 ZBTB7BO15156 539 aaPredicted RBP11.67□□□□□ -0.54
HTT-205ENST00000509043 MSH5O43196 834 aa11.67□□□□□ -0.54
HTT-205ENST00000509043 GCP02774 474 aa11.67□□□□□ -0.54
HTT-205ENST00000509043 RGS3P49796 1198 aa11.67□□□□□ -0.54
HTT-205ENST00000509043 DCTN1Q14203 1278 aa11.67□□□□□ -0.54
HTT-205ENST00000509043 AMOTQ4VCS5 1084 aa11.67□□□□□ -0.54
HTT-205ENST00000509043 INTS3Q68E01 1043 aaKnown RBP11.67□□□□□ -0.54
HTT-205ENST00000509043 KRT28Q7Z3Y7 464 aa11.67□□□□□ -0.54
HTT-205ENST00000509043 ARHGEF25Q86VW2 580 aa11.67□□□□□ -0.54
HTT-205ENST00000509043 ZBTB47Q9UFB7 747 aaPredicted RBP11.67□□□□□ -0.54
HTT-205ENST00000509043 TSPYL4Q9UJ04 414 aa11.67□□□□□ -0.54
HTT-205ENST00000509043 NUTM2GQ5VZR2 741 aa11.66□□□□□ -0.54
HTT-205ENST00000509043 ORAI2Q96SN7 254 aa11.66□□□□□ -0.54
HTT-205ENST00000509043 PDZRN3Q9UPQ7 1066 aa11.66□□□□□ -0.54
HTT-205ENST00000509043 TMEM94Q12767 1356 aa11.66□□□□□ -0.54
HTT-205ENST00000509043 CAMTA1Q9Y6Y1 1673 aa11.65□□□□□ -0.54
HTT-205ENST00000509043 VIRMAQ69YN4 1812 aaKnown RBP11.65□□□□□ -0.54
HTT-205ENST00000509043 FOXO3O43524 673 aa11.65□□□□□ -0.54
HTT-205ENST00000509043 HOXB7P09629 217 aa11.65□□□□□ -0.54
HTT-205ENST00000509043 TAF7Q15545 349 aaPredicted RBP11.65□□□□□ -0.54
HTT-205ENST00000509043 PLEKHO1Q53GL0 409 aaPredicted RBP11.65□□□□□ -0.54
HTT-205ENST00000509043 MSH6P52701 1360 aa11.65□□□□□ -0.55
HTT-205ENST00000509043 CEMIPQ8WUJ3 1361 aa11.65□□□□□ -0.55
HTT-205ENST00000509043 ALS2Q96Q42 1657 aa11.65□□□□□ -0.55
HTT-205ENST00000509043 NPHP3Q7Z494 1330 aa11.64□□□□□ -0.55
HTT-205ENST00000509043 ELL2O00472 640 aaPredicted RBP11.64□□□□□ -0.55
HTT-205ENST00000509043 EIF5BO60841 1220 aaKnown RBP11.64□□□□□ -0.55
HTT-205ENST00000509043 STK31Q9BXU1 1019 aa11.64□□□□□ -0.55
HTT-205ENST00000509043 MED1Q15648 1581 aaPredicted RBP11.63□□□□□ -0.55
HTT-205ENST00000509043 CCT4P50991 539 aaKnown RBP11.63□□□□□ -0.55
HTT-205ENST00000509043 AKAP4Q5JQC9 854 aa11.63□□□□□ -0.55
HTT-205ENST00000509043 CCDC30Q5VVM6 783 aa11.63□□□□□ -0.55
HTT-205ENST00000509043 RBM33Q96EV2 1170 aaKnown RBP11.63□□□□□ -0.55
HTT-205ENST00000509043 UPF2Q9HAU5 1272 aaKnown RBP11.63□□□□□ -0.55
HTT-205ENST00000509043 LMO7Q8WWI1 1683 aa11.62□□□□□ -0.55
HTT-205ENST00000509043 NUCB1Q02818 461 aa11.62□□□□□ -0.55
HTT-205ENST00000509043 NBPF6Q5VWK0 638 aa11.62□□□□□ -0.55
HTT-205ENST00000509043 RPAP2Q8IXW5 612 aaPredicted RBP11.62□□□□□ -0.55
HTT-205ENST00000509043 NBPF4Q96M43 638 aa11.62□□□□□ -0.55
HTT-205ENST00000509043 RGS12O14924 1447 aa11.61□□□□□ -0.55
HTT-205ENST00000509043 SKAP1Q86WV1 359 aa11.61□□□□□ -0.55
HTT-205ENST00000509043 IL17REQ8NFR9 667 aa11.61□□□□□ -0.55
HTT-205ENST00000509043 LTV1Q96GA3 475 aaPredicted RBP11.61□□□□□ -0.55
HTT-205ENST00000509043 PXDNLA1KZ92 1463 aa11.61□□□□□ -0.55
HTT-205ENST00000509043 TNS3Q68CZ2 1445 aa11.6□□□□□ -0.55
HTT-205ENST00000509043 SLC4A2P04920 1241 aa11.6□□□□□ -0.55
HTT-205ENST00000509043 NPM2Q86SE8 214 aaKnown RBP11.6□□□□□ -0.55
HTT-205ENST00000509043 ANKRD24Q8TF21 1146 aa11.6□□□□□ -0.55
HTT-205ENST00000509043 CACNA1FO60840 1977 aa11.59□□□□□ -0.55
HTT-205ENST00000509043 FAM208AQ9UK61 1670 aaKnown RBP11.59□□□□□ -0.55
HTT-205ENST00000509043 CPDO75976 1380 aa11.59□□□□□ -0.55
HTT-205ENST00000509043 C1orf141Q5JVX7 400 aa11.59□□□□□ -0.55
HTT-205ENST00000509043 CHD1LQ86WJ1 897 aa11.59□□□□□ -0.55
HTT-205ENST00000509043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.59□□□□□ -0.555e-7■■■□□ 16.8
HTT-205ENST00000509043 STRCP1A6NGW2 1772 aa11.59□□□□□ -0.55
HTT-205ENST00000509043 ZNF530Q6P9A1 599 aaPredicted RBP11.58□□□□□ -0.56
HTT-205ENST00000509043 ANKRD44Q8N8A2 993 aa11.58□□□□□ -0.56
HTT-205ENST00000509043 DAXXQ9UER7 740 aaPredicted RBP11.58□□□□□ -0.56
HTT-205ENST00000509043 ERBB3P21860 1342 aa11.58□□□□□ -0.56
HTT-205ENST00000509043 PXDNQ92626 1479 aa11.57□□□□□ -0.56
HTT-205ENST00000509043 HMMRO75330 724 aa11.57□□□□□ -0.56
HTT-205ENST00000509043 TEFQ10587 303 aa11.57□□□□□ -0.56
HTT-205ENST00000509043 LMOD2Q6P5Q4 547 aa11.57□□□□□ -0.56
HTT-205ENST00000509043 DCTPP1Q9H773 170 aa11.57□□□□□ -0.56
HTT-205ENST00000509043 SPATA31A3Q5VYP0 1347 aa11.57□□□□□ -0.56
HTT-205ENST00000509043 ADAMTS7Q9UKP4 1686 aa11.56□□□□□ -0.56
HTT-205ENST00000509043 GNAI3P08754 354 aa11.56□□□□□ -0.56
HTT-205ENST00000509043 KRT24Q2M2I5 525 aa11.56□□□□□ -0.56
HTT-205ENST00000509043 BMP2KLQ5H9B9 411 aa11.56□□□□□ -0.56
HTT-205ENST00000509043 USHBP1Q8N6Y0 703 aa11.56□□□□□ -0.56
HTT-205ENST00000509043 KDM3BQ7LBC6 1761 aa11.56□□□□□ -0.56
HTT-205ENST00000509043 ATP10DQ9P241 1426 aa11.55□□□□□ -0.56
HTT-205ENST00000509043 N4BP2Q86UW6 1770 aaPredicted RBP11.55□□□□□ -0.56
HTT-205ENST00000509043 XPCQ01831 940 aaPredicted RBP11.55□□□□□ -0.56
HTT-205ENST00000509043 FLIIQ13045 1269 aa11.55□□□□□ -0.56
HTT-205ENST00000509043 MIS18AQ9NYP9 233 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms