RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 USP17L4A6NCW7 530 aa14.25□□□□□ -0.13
CHD1-205ENST00000508756 MYCP01106 439 aaPredicted RBP14.25□□□□□ -0.13
CHD1-205ENST00000508756 RELBQ01201 579 aa14.25□□□□□ -0.13
CHD1-205ENST00000508756 USP17L2Q6R6M4 530 aa14.25□□□□□ -0.13
CHD1-205ENST00000508756 USP17L1Q7RTZ2 530 aa14.25□□□□□ -0.13
CHD1-205ENST00000508756 LINC00528Q8N1L1 170 aa14.25□□□□□ -0.13
CHD1-205ENST00000508756 USP4Q13107 963 aa14.24□□□□□ -0.13
CHD1-205ENST00000508756 C6orf118Q5T5N4 469 aa14.24□□□□□ -0.13
CHD1-205ENST00000508756 KDF1Q8NAX2 398 aaPredicted RBP14.24□□□□□ -0.13
CHD1-205ENST00000508756 TRIM52Q96A61 297 aa14.24□□□□□ -0.13
CHD1-205ENST00000508756 ESF1Q9H501 851 aaKnown RBP14.24□□□□□ -0.13
CHD1-205ENST00000508756 MAFBQ9Y5Q3 323 aaPredicted RBP14.24□□□□□ -0.13
CHD1-205ENST00000508756 EML3Q32P44 896 aa14.23□□□□□ -0.13
CHD1-205ENST00000508756 PURBQ96QR8 312 aaKnown RBP14.23□□□□□ -0.13
CHD1-205ENST00000508756 PLEKHM2Q8IWE5 1019 aa14.22□□□□□ -0.13
CHD1-205ENST00000508756 TSEN34Q9BSV6 310 aaKnown RBP14.22□□□□□ -0.13
CHD1-205ENST00000508756 CFAP70Q5T0N1 1121 aa14.21□□□□□ -0.13
CHD1-205ENST00000508756 CCDC82Q8N4S0 544 aa14.21□□□□□ -0.13
CHD1-205ENST00000508756 ATP5J2-PTCD1G3V325 749 aa14.2□□□□□ -0.14
CHD1-205ENST00000508756 UPP2O95045 317 aa14.2□□□□□ -0.14
CHD1-205ENST00000508756 BMP2P12643 396 aa14.2□□□□□ -0.14
CHD1-205ENST00000508756 CYP2U1Q7Z449 544 aa14.2□□□□□ -0.14
CHD1-205ENST00000508756 CCDC97Q96F63 343 aaPredicted RBP14.2□□□□□ -0.14
CHD1-205ENST00000508756 ZFP42Q96MM3 310 aa14.2□□□□□ -0.14
CHD1-205ENST00000508756 ZNF395Q9H8N7 513 aaPredicted RBP14.2□□□□□ -0.14
CHD1-205ENST00000508756 LZTS3O60299 673 aaPredicted RBP14.19□□□□□ -0.14
CHD1-205ENST00000508756 LMOD1P29536 600 aaPredicted RBP14.19□□□□□ -0.14
CHD1-205ENST00000508756 SCARF1Q14162 830 aa14.19□□□□□ -0.14
CHD1-205ENST00000508756 SIRT1Q96EB6 747 aa14.19□□□□□ -0.14
CHD1-205ENST00000508756 GMPR2Q9P2T1 348 aaKnown RBP14.19□□□□□ -0.14
CHD1-205ENST00000508756 PTGIRP43119 386 aa14.18□□□□□ -0.14
CHD1-205ENST00000508756 NOD1Q9Y239 953 aa14.18□□□□□ -0.14
CHD1-205ENST00000508756 STAU1O95793 577 aaKnown RBP14.17□□□□□ -0.14
CHD1-205ENST00000508756 POTECB2RU33 542 aa14.16□□□□□ -0.14
CHD1-205ENST00000508756 RFX1P22670 979 aa14.16□□□□□ -0.14
CHD1-205ENST00000508756 ARHGEF10LQ9HCE6 1279 aa14.16□□□□□ -0.14
CHD1-205ENST00000508756 RAB6BQ9NRW1 208 aa14.16□□□□□ -0.14
CHD1-205ENST00000508756 SERPINA10Q9UK55 444 aa14.16□□□□□ -0.14
CHD1-205ENST00000508756 SPINT1O43278 529 aa14.15□□□□□ -0.14
CHD1-205ENST00000508756 GTF2IP78347 998 aa14.15□□□□□ -0.14
CHD1-205ENST00000508756 INSM2Q96T92 566 aaPredicted RBP14.15□□□□□ -0.14
CHD1-205ENST00000508756 MKRN1Q9UHC7 482 aaKnown RBP14.15□□□□□ -0.14
CHD1-205ENST00000508756 PCDHGA11Q9Y5H2 935 aa14.15□□□□□ -0.14
CHD1-205ENST00000508756 A0A1W2PRU2 124 aa14.13□□□□□ -0.15
CHD1-205ENST00000508756 GNRH1P01148 92 aa14.12□□□□□ -0.15
CHD1-205ENST00000508756 MEN1O00255 615 aa14.11□□□□□ -0.15
CHD1-205ENST00000508756 CTSOP43234 321 aaPredicted RBP14.11□□□□□ -0.15
CHD1-205ENST00000508756 CLDN10P78369 228 aa14.11□□□□□ -0.15
CHD1-205ENST00000508756 KANK4Q5T7N3 995 aaPredicted RBP14.11□□□□□ -0.15
CHD1-205ENST00000508756 TRIM47Q96LD4 638 aa14.11□□□□□ -0.15
CHD1-205ENST00000508756 SENP2Q9HC62 589 aa14.11□□□□□ -0.15
CHD1-205ENST00000508756 PSME1Q06323 249 aa14.1□□□□□ -0.15
CHD1-205ENST00000508756 TRIM50Q86XT4 487 aa14.1□□□□□ -0.15
CHD1-205ENST00000508756 ETNK1Q9HBU6 452 aa14.1□□□□□ -0.15
CHD1-205ENST00000508756 POLMQ9NP87 494 aaPredicted RBP14.1□□□□□ -0.15
CHD1-205ENST00000508756 KIAA1024Q9UPX6 916 aa14.1□□□□□ -0.15
CHD1-205ENST00000508756 IL2RAP01589 272 aa14.09□□□□□ -0.15
CHD1-205ENST00000508756 SNRPBP14678 240 aaKnown RBP14.09□□□□□ -0.15
CHD1-205ENST00000508756 SCNN1DP51172 638 aa14.09□□□□□ -0.15
CHD1-205ENST00000508756 CDCA8Q53HL2 280 aa14.09□□□□□ -0.15
CHD1-205ENST00000508756 OGFOD1Q8N543 542 aa14.09□□□□□ -0.15
CHD1-205ENST00000508756 C11orf95C9JLR9 678 aaPredicted RBP14.08□□□□□ -0.16
CHD1-205ENST00000508756 CLN3Q13286 438 aa14.08□□□□□ -0.16
CHD1-205ENST00000508756 SOS2Q07890 1332 aaPredicted RBP14.08□□□□□ -0.16
CHD1-205ENST00000508756 TTLL8A6PVC2 850 aa14.07□□□□□ -0.16
CHD1-205ENST00000508756 SOBPA7XYQ1 873 aa14.07□□□□□ -0.16
CHD1-205ENST00000508756 GDF10P55107 478 aa14.07□□□□□ -0.16
CHD1-205ENST00000508756 KIFC2Q96AC6 838 aa14.07□□□□□ -0.16
CHD1-205ENST00000508756 ZNF594Q96JF6 807 aaPredicted RBP14.07□□□□□ -0.16
CHD1-205ENST00000508756 VRTNQ9H8Y1 702 aa14.07□□□□□ -0.16
CHD1-205ENST00000508756 DNAAF2Q9NVR5 837 aaKnown RBP14.07□□□□□ -0.16
CHD1-205ENST00000508756 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.06□□□□□ -0.16
CHD1-205ENST00000508756 ZBTB7BO15156 539 aaPredicted RBP14.06□□□□□ -0.16
CHD1-205ENST00000508756 RASA1P20936 1047 aa14.06□□□□□ -0.16
CHD1-205ENST00000508756 ATP1A2P50993 1020 aa14.06□□□□□ -0.16
CHD1-205ENST00000508756 FOXD4L5Q5VV16 416 aaPredicted RBP14.06□□□□□ -0.16
CHD1-205ENST00000508756 CNKSR1Q969H4 720 aa14.06□□□□□ -0.16
CHD1-205ENST00000508756 ARID3AQ99856 593 aa14.06□□□□□ -0.16
CHD1-205ENST00000508756 FIGNL2A6NMB9 653 aa14.05□□□□□ -0.16
CHD1-205ENST00000508756 TMEM229AB2RXF0 380 aa14.05□□□□□ -0.16
CHD1-205ENST00000508756 CRTC2Q53ET0 693 aaPredicted RBP14.05□□□□□ -0.16
CHD1-205ENST00000508756 TPCN2Q8NHX9 752 aa14.05□□□□□ -0.16
CHD1-205ENST00000508756 NLRP3Q96P20 1036 aa14.05□□□□□ -0.16
CHD1-205ENST00000508756 DNMT3LQ9UJW3 386 aa14.05□□□□□ -0.16
CHD1-205ENST00000508756 ESCO1Q5FWF5 840 aa14.04□□□□□ -0.16
CHD1-205ENST00000508756 XAGE2Q96GT9 111 aa14.04□□□□□ -0.16
CHD1-205ENST00000508756 ESYT1Q9BSJ8 1104 aa14.04□□□□□ -0.16
CHD1-205ENST00000508756 INHAP05111 366 aa14.03□□□□□ -0.16
CHD1-205ENST00000508756 CCDC102BQ68D86 513 aa14.03□□□□□ -0.16
CHD1-205ENST00000508756 ZNF787Q6DD87 383 aa14.03□□□□□ -0.16
CHD1-205ENST00000508756 RNF217Q8TC41 542 aa14.03□□□□□ -0.16
CHD1-205ENST00000508756 MAN1A2O60476 641 aa14.02□□□□□ -0.17
CHD1-205ENST00000508756 SRPK2P78362 688 aaKnown RBP14.02□□□□□ -0.17
CHD1-205ENST00000508756 LARP1Q6PKG0 1096 aaKnown RBP14.02□□□□□ -0.17
CHD1-205ENST00000508756 LARGE2Q8N3Y3 721 aa14.02□□□□□ -0.17
CHD1-205ENST00000508756 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.02□□□□□ -0.17
CHD1-205ENST00000508756 SERTAD1Q9UHV2 236 aa14.02□□□□□ -0.17
CHD1-205ENST00000508756 HRH3Q9Y5N1 445 aa14.02□□□□□ -0.17
CHD1-205ENST00000508756 USP17L15C9J2P7 530 aa14.01□□□□□ -0.17
CHD1-205ENST00000508756 USP17L10C9JJH3 530 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms