RNA–Protein interactions for RNA: ENST00000508717.1

TRIO-212, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 859 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-212ENST00000508717 HMOX1P09601 288 aa17.54■□□□□ 0.4
TRIO-212ENST00000508717 TATP17735 454 aaPredicted RBP17.54■□□□□ 0.4
TRIO-212ENST00000508717 WDR43Q15061 677 aaKnown RBP eCLIP17.54■□□□□ 0.4
TRIO-212ENST00000508717 ADAMTS8Q9UP79 889 aa17.54■□□□□ 0.4
TRIO-212ENST00000508717 AMOTQ4VCS5 1084 aa17.53■□□□□ 0.4
TRIO-212ENST00000508717 PLEKHF1Q96S99 279 aa17.53■□□□□ 0.4
TRIO-212ENST00000508717 SEPT12Q8IYM1 358 aa17.52■□□□□ 0.4
TRIO-212ENST00000508717 TNS2Q63HR2 1409 aa17.52■□□□□ 0.4
TRIO-212ENST00000508717 EXOC5O00471 708 aa17.51■□□□□ 0.39
TRIO-212ENST00000508717 DDB1Q16531 1140 aa17.51■□□□□ 0.39
TRIO-212ENST00000508717 ZCRB1Q8TBF4 217 aaKnown RBP17.51■□□□□ 0.39
TRIO-212ENST00000508717 PKD1L3Q7Z443 1732 aa17.5■□□□□ 0.39
TRIO-212ENST00000508717 PRKAR2BP31323 418 aa17.5■□□□□ 0.39
TRIO-212ENST00000508717 PLEKHO1Q53GL0 409 aaPredicted RBP17.5■□□□□ 0.39
TRIO-212ENST00000508717 SPG7Q9UQ90 795 aa17.5■□□□□ 0.39
TRIO-212ENST00000508717 BCL9O00512 1426 aa17.49■□□□□ 0.39
TRIO-212ENST00000508717 RGS12O14924 1447 aa17.49■□□□□ 0.39
TRIO-212ENST00000508717 LRRC37A3O60309 1634 aa17.49■□□□□ 0.39
TRIO-212ENST00000508717 PCDH11XQ9BZA7 1347 aa17.47■□□□□ 0.39
TRIO-212ENST00000508717 PCDH11YQ9BZA8 1340 aa17.47■□□□□ 0.39
TRIO-212ENST00000508717 NKX1-1Q15270 411 aaPredicted RBP17.47■□□□□ 0.39
TRIO-212ENST00000508717 NCBP3Q53F19 620 aaKnown RBP17.47■□□□□ 0.39
TRIO-212ENST00000508717 RUNDC1Q96C34 613 aa17.47■□□□□ 0.39
TRIO-212ENST00000508717 PHACTR3Q96KR7 559 aa17.47■□□□□ 0.39
TRIO-212ENST00000508717 CYP27B1O15528 508 aa17.46■□□□□ 0.39
TRIO-212ENST00000508717 GAS2L2Q8NHY3 880 aa17.46■□□□□ 0.39
TRIO-212ENST00000508717 SHANK3Q9BYB0 1731 aa17.46■□□□□ 0.39
TRIO-212ENST00000508717 NEFMP07197 916 aa17.45■□□□□ 0.38
TRIO-212ENST00000508717 MTHFSDQ2M296 383 aaKnown RBP17.45■□□□□ 0.38
TRIO-212ENST00000508717 IFNL2Q8IZJ0 200 aa17.45■□□□□ 0.38
TRIO-212ENST00000508717 PHKG2P15735 406 aa17.44■□□□□ 0.38
TRIO-212ENST00000508717 PDE3BQ13370 1112 aa17.44■□□□□ 0.38
TRIO-212ENST00000508717 AKAP4Q5JQC9 854 aa17.44■□□□□ 0.38
TRIO-212ENST00000508717 KRT27Q7Z3Y8 459 aa17.44■□□□□ 0.38
TRIO-212ENST00000508717 MARCH10Q8NA82 808 aaPredicted RBP17.44■□□□□ 0.38
TRIO-212ENST00000508717 MAPK8IP3Q9UPT6 1336 aa17.43■□□□□ 0.38
TRIO-212ENST00000508717 BRWD3Q6RI45 1802 aa17.42■□□□□ 0.38
TRIO-212ENST00000508717 A0A0G2JS52 829 aa17.42■□□□□ 0.38
TRIO-212ENST00000508717 HTATSF1O43719 755 aaKnown RBP17.42■□□□□ 0.38
TRIO-212ENST00000508717 HSP90AB1P08238 724 aaKnown RBP17.42■□□□□ 0.38
TRIO-212ENST00000508717 MYT1Q01538 1121 aa17.42■□□□□ 0.38
TRIO-212ENST00000508717 NFE2L2Q16236 605 aa17.42■□□□□ 0.38
TRIO-212ENST00000508717 ZNF530Q6P9A1 599 aaPredicted RBP17.42■□□□□ 0.38
TRIO-212ENST00000508717 FAM9BQ8IZU0 186 aa17.42■□□□□ 0.38
TRIO-212ENST00000508717 NGEFQ8N5V2 710 aa17.41■□□□□ 0.38
TRIO-212ENST00000508717 TMPOP42166 694 aaKnown RBP17.4■□□□□ 0.38
TRIO-212ENST00000508717 C1orf141Q5JVX7 400 aa17.4■□□□□ 0.38
TRIO-212ENST00000508717 CCDC146Q8IYE0 955 aa17.4■□□□□ 0.38
TRIO-212ENST00000508717 DDX54Q8TDD1 881 aaKnown RBP17.4■□□□□ 0.38
TRIO-212ENST00000508717 DCAF5Q96JK2 942 aa17.4■□□□□ 0.38
TRIO-212ENST00000508717 ADAMTS7Q9UKP4 1686 aa17.39■□□□□ 0.37
TRIO-212ENST00000508717 GNAT3A8MTJ3 354 aa17.39■□□□□ 0.37
TRIO-212ENST00000508717 FAM196AQ6ZSG2 479 aa17.39■□□□□ 0.37
TRIO-212ENST00000508717 MAP3K5Q99683 1374 aa17.39■□□□□ 0.37
TRIO-212ENST00000508717 APAF1O14727 1248 aa17.38■□□□□ 0.37
TRIO-212ENST00000508717 EP400Q96L91 3159 aa17.38■□□□□ 0.37
TRIO-212ENST00000508717 CCDC27Q2M243 656 aa17.37■□□□□ 0.37
TRIO-212ENST00000508717 CEMIPQ8WUJ3 1361 aa17.37■□□□□ 0.37
TRIO-212ENST00000508717 ERVV-2B6SEH9 535 aa17.36■□□□□ 0.37
TRIO-212ENST00000508717 KDM6AO15550 1401 aaPredicted RBP17.36■□□□□ 0.37
TRIO-212ENST00000508717 RIPK4P57078 832 aa17.35■□□□□ 0.37
TRIO-212ENST00000508717 LMOD3Q0VAK6 560 aa17.35■□□□□ 0.37
TRIO-212ENST00000508717 IL17REQ8NFR9 667 aa17.35■□□□□ 0.37
TRIO-212ENST00000508717 RNMTO43148 476 aaKnown RBP17.34■□□□□ 0.37
TRIO-212ENST00000508717 TRIM35Q9UPQ4 493 aa17.34■□□□□ 0.37
TRIO-212ENST00000508717 MRC1P22897 1456 aa17.33■□□□□ 0.37
TRIO-212ENST00000508717 MPRIPQ6WCQ1 1025 aa17.33■□□□□ 0.36
TRIO-212ENST00000508717 DLG5Q8TDM6 1919 aa17.33■□□□□ 0.36
TRIO-212ENST00000508717 SCN11AQ9UI33 1791 aa17.33■□□□□ 0.36
TRIO-212ENST00000508717 RTF1Q92541 710 aaKnown RBP17.32■□□□□ 0.36
TRIO-212ENST00000508717 LGR6Q9HBX8 967 aa17.32■□□□□ 0.36
TRIO-212ENST00000508717 SBF2Q86WG5 1849 aa17.31■□□□□ 0.36
TRIO-212ENST00000508717 FAM182BQ5T319 152 aa17.31■□□□□ 0.36
TRIO-212ENST00000508717 BCL11BQ9C0K0 894 aaPredicted RBP17.31■□□□□ 0.36
TRIO-212ENST00000508717 TOGARAM1Q9Y4F4 1720 aa17.3■□□□□ 0.36
TRIO-212ENST00000508717 SLC52A2Q9HAB3 445 aa17.3■□□□□ 0.36
TRIO-212ENST00000508717 RRP7AQ9Y3A4 280 aaKnown RBP17.3■□□□□ 0.36
TRIO-212ENST00000508717 NHSQ6T4R5 1651 aa17.29■□□□□ 0.36
TRIO-212ENST00000508717 ILDR2Q71H61 639 aa17.29■□□□□ 0.36
TRIO-212ENST00000508717 CCDC125Q86Z20 511 aa17.29■□□□□ 0.36
TRIO-212ENST00000508717 BABAM1Q9NWV8 329 aa17.29■□□□□ 0.36
TRIO-212ENST00000508717 ZNF521Q96K83 1311 aa17.28■□□□□ 0.36
TRIO-212ENST00000508717 PRIM1P49642 420 aaKnown RBP17.28■□□□□ 0.36
TRIO-212ENST00000508717 NEUROD2Q15784 382 aa17.28■□□□□ 0.36
TRIO-212ENST00000508717 MCM10Q7L590 875 aa17.28■□□□□ 0.36
TRIO-212ENST00000508717 WWC1Q8IX03 1113 aa17.28■□□□□ 0.36
TRIO-212ENST00000508717 DOT1LQ8TEK3 1739 aa17.27■□□□□ 0.36
TRIO-212ENST00000508717 VIRMAQ69YN4 1812 aaKnown RBP17.27■□□□□ 0.36
TRIO-212ENST00000508717 KCNQ2O43526 872 aa17.27■□□□□ 0.36
TRIO-212ENST00000508717 CABP4P57796 275 aa17.27■□□□□ 0.36
TRIO-212ENST00000508717 ITGB4P16144 1822 aa17.26■□□□□ 0.35
TRIO-212ENST00000508717 CALD1Q05682 793 aaKnown RBP17.26■□□□□ 0.35
TRIO-212ENST00000508717 TEFQ10587 303 aa17.26■□□□□ 0.35
TRIO-212ENST00000508717 DCTN1Q14203 1278 aa17.26■□□□□ 0.35
TRIO-212ENST00000508717 WDR63Q8IWG1 891 aa17.26■□□□□ 0.35
TRIO-212ENST00000508717 NFATC2IPQ8NCF5 419 aa17.26■□□□□ 0.35
TRIO-212ENST00000508717 PIGBQ92521 554 aa17.26■□□□□ 0.35
TRIO-212ENST00000508717 ACSBG1Q96GR2 724 aa17.26■□□□□ 0.35
TRIO-212ENST00000508717 TMOD3Q9NYL9 352 aa17.26■□□□□ 0.35
TRIO-212ENST00000508717 SIPA1L3O60292 1781 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms