RNA–Protein interactions for RNA: ENST00000508619.1

LINC02171-201, Transcript of long intergenic non-protein coding RNA 2171, humanhuman

TSL 1 (best) BASIC

Gene LINC02171, Length 1,033 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02171-201ENST00000508619 KAT6BQ8WYB5 2073 aa18.61■□□□□ 0.57
LINC02171-201ENST00000508619 PLEKHG2Q9H7P9 1386 aa18.61■□□□□ 0.57
LINC02171-201ENST00000508619 DDX54Q8TDD1 881 aaKnown RBP18.61■□□□□ 0.57
LINC02171-201ENST00000508619 ACSBG1Q96GR2 724 aa18.61■□□□□ 0.57
LINC02171-201ENST00000508619 EMILIN1Q9Y6C2 1016 aa18.6■□□□□ 0.57
LINC02171-201ENST00000508619 TATP17735 454 aaPredicted RBP18.59■□□□□ 0.57
LINC02171-201ENST00000508619 SLC27A3Q5K4L6 730 aa18.59■□□□□ 0.57
LINC02171-201ENST00000508619 SPON1Q9HCB6 807 aa18.59■□□□□ 0.57
LINC02171-201ENST00000508619 STK32BQ9NY57 414 aa18.59■□□□□ 0.57
LINC02171-201ENST00000508619 CASZ1Q86V15 1759 aa18.59■□□□□ 0.57
LINC02171-201ENST00000508619 PAPPAQ13219 1627 aa18.59■□□□□ 0.57
LINC02171-201ENST00000508619 PANK3Q9H999 370 aa18.58■□□□□ 0.56
LINC02171-201ENST00000508619 POLKQ9UBT6 870 aa18.58■□□□□ 0.56
LINC02171-201ENST00000508619 MAP2P11137 1827 aaKnown RBP18.58■□□□□ 0.56
LINC02171-201ENST00000508619 PCDH11XQ9BZA7 1347 aa18.57■□□□□ 0.56
LINC02171-201ENST00000508619 PCDH11YQ9BZA8 1340 aa18.57■□□□□ 0.56
LINC02171-201ENST00000508619 SLC15A2Q16348 729 aa18.57■□□□□ 0.56
LINC02171-201ENST00000508619 POLR3GLQ9BT43 218 aa18.57■□□□□ 0.56
LINC02171-201ENST00000508619 USHBP1Q8N6Y0 703 aa18.56■□□□□ 0.56
LINC02171-201ENST00000508619 DOT1LQ8TEK3 1739 aa18.55■□□□□ 0.56
LINC02171-201ENST00000508619 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.55■□□□□ 0.56
LINC02171-201ENST00000508619 PKD1L3Q7Z443 1732 aa18.54■□□□□ 0.56
LINC02171-201ENST00000508619 PRIM1P49642 420 aaKnown RBP18.54■□□□□ 0.56
LINC02171-201ENST00000508619 HMGB2P26583 209 aaKnown RBP18.53■□□□□ 0.56
LINC02171-201ENST00000508619 PPM1GO15355 546 aaPredicted RBP18.52■□□□□ 0.56
LINC02171-201ENST00000508619 EYA1Q99502 592 aa18.52■□□□□ 0.56
LINC02171-201ENST00000508619 LY75O60449 1722 aa18.52■□□□□ 0.55
LINC02171-201ENST00000508619 NKX1-1Q15270 411 aaPredicted RBP18.51■□□□□ 0.55
LINC02171-201ENST00000508619 LRRC4BQ9NT99 713 aa18.51■□□□□ 0.55
LINC02171-201ENST00000508619 KNSTRNQ9Y448 316 aa18.51■□□□□ 0.55
LINC02171-201ENST00000508619 KIF7Q2M1P5 1343 aa18.5■□□□□ 0.55
LINC02171-201ENST00000508619 QSER1Q2KHR3 1735 aa18.5■□□□□ 0.55
LINC02171-201ENST00000508619 CYP27B1O15528 508 aa18.5■□□□□ 0.55
LINC02171-201ENST00000508619 SYTL4Q96C24 671 aaPredicted RBP18.5■□□□□ 0.55
LINC02171-201ENST00000508619 SPG7Q9UQ90 795 aa18.5■□□□□ 0.55
LINC02171-201ENST00000508619 EIF4A2Q14240 407 aaKnown RBP18.49■□□□□ 0.55
LINC02171-201ENST00000508619 AKT1S1Q96B36 256 aa18.49■□□□□ 0.55
LINC02171-201ENST00000508619 MTFR1LQ9H019 292 aa18.49■□□□□ 0.55
LINC02171-201ENST00000508619 IGSF1Q8N6C5 1336 aa18.49■□□□□ 0.55
LINC02171-201ENST00000508619 AMER1Q5JTC6 1135 aaPredicted RBP18.48■□□□□ 0.55
LINC02171-201ENST00000508619 PPP1R1BQ9UD71 204 aaPredicted RBP18.48■□□□□ 0.55
LINC02171-201ENST00000508619 PTGER2P43116 358 aa18.47■□□□□ 0.55
LINC02171-201ENST00000508619 MORC1Q86VD1 984 aa18.47■□□□□ 0.55
LINC02171-201ENST00000508619 PDGFDQ9GZP0 370 aaPredicted RBP18.47■□□□□ 0.55
LINC02171-201ENST00000508619 ZNF827Q17R98 1081 aa18.46■□□□□ 0.55
LINC02171-201ENST00000508619 SLC16A10Q8TF71 515 aa18.46■□□□□ 0.55
LINC02171-201ENST00000508619 TNNT2P45379 298 aaPredicted RBP18.45■□□□□ 0.54
LINC02171-201ENST00000508619 SGIP1Q9BQI5 828 aa18.45■□□□□ 0.54
LINC02171-201ENST00000508619 ZBTB7AO95365 584 aa18.44■□□□□ 0.54
LINC02171-201ENST00000508619 SMARCC1Q92922 1105 aaPredicted RBP18.44■□□□□ 0.54
LINC02171-201ENST00000508619 CCNL1Q9UK58 526 aaPredicted RBP18.44■□□□□ 0.54
LINC02171-201ENST00000508619 NPC1L1Q9UHC9 1359 aa18.43■□□□□ 0.54
LINC02171-201ENST00000508619 TOGARAM1Q9Y4F4 1720 aa18.43■□□□□ 0.54
LINC02171-201ENST00000508619 PER1O15534 1290 aaPredicted RBP18.43■□□□□ 0.54
LINC02171-201ENST00000508619 IFNL2Q8IZJ0 200 aa18.43■□□□□ 0.54
LINC02171-201ENST00000508619 PALLDQ8WX93 1383 aa18.42■□□□□ 0.54
LINC02171-201ENST00000508619 MAP3K5Q99683 1374 aa18.42■□□□□ 0.54
LINC02171-201ENST00000508619 PHKG2P15735 406 aa18.41■□□□□ 0.54
LINC02171-201ENST00000508619 ITGB4P16144 1822 aa18.41■□□□□ 0.54
LINC02171-201ENST00000508619 PNPLA7Q6ZV29 1317 aa18.41■□□□□ 0.54
LINC02171-201ENST00000508619 KDRP35968 1356 aa18.41■□□□□ 0.54
LINC02171-201ENST00000508619 COL24A1Q17RW2 1714 aa18.4■□□□□ 0.54
LINC02171-201ENST00000508619 AMOTQ4VCS5 1084 aa18.4■□□□□ 0.54
LINC02171-201ENST00000508619 MPRIPQ6WCQ1 1025 aa18.4■□□□□ 0.54
LINC02171-201ENST00000508619 HSP90AB1P08238 724 aaKnown RBP18.39■□□□□ 0.53
LINC02171-201ENST00000508619 PIGBQ92521 554 aa18.39■□□□□ 0.53
LINC02171-201ENST00000508619 TFCP2L1Q9NZI6 479 aa18.39■□□□□ 0.53
LINC02171-201ENST00000508619 ATF5Q9Y2D1 282 aaPredicted RBP18.39■□□□□ 0.53
LINC02171-201ENST00000508619 PLEKHO1Q53GL0 409 aaPredicted RBP18.38■□□□□ 0.53
LINC02171-201ENST00000508619 TUBGCP6Q96RT7 1819 aa18.37■□□□□ 0.53
LINC02171-201ENST00000508619 FLAD1Q8NFF5 587 aa18.37■□□□□ 0.53
LINC02171-201ENST00000508619 C5P01031 1676 aa18.37■□□□□ 0.53
LINC02171-201ENST00000508619 ERVV-2B6SEH9 535 aa18.36■□□□□ 0.53
LINC02171-201ENST00000508619 IL13P35225 146 aa18.36■□□□□ 0.53
LINC02171-201ENST00000508619 TAF1LQ8IZX4 1826 aa18.36■□□□□ 0.53
LINC02171-201ENST00000508619 DCAF5Q96JK2 942 aa18.36■□□□□ 0.53
LINC02171-201ENST00000508619 ARXQ96QS3 562 aa18.36■□□□□ 0.53
LINC02171-201ENST00000508619 TMOD3Q9NYL9 352 aa18.36■□□□□ 0.53
LINC02171-201ENST00000508619 DCAF8L1A6NGE4 600 aa18.35■□□□□ 0.53
LINC02171-201ENST00000508619 KCNQ4P56696 695 aa18.35■□□□□ 0.53
LINC02171-201ENST00000508619 POLD1P28340 1107 aa18.33■□□□□ 0.52
LINC02171-201ENST00000508619 SYT17Q9BSW7 474 aa18.33■□□□□ 0.52
LINC02171-201ENST00000508619 FHDC1Q9C0D6 1143 aaPredicted RBP18.33■□□□□ 0.52
LINC02171-201ENST00000508619 LOC102724428A0A0B4J2F2 783 aa18.32■□□□□ 0.52
LINC02171-201ENST00000508619 MTHFSP49914 203 aa18.32■□□□□ 0.52
LINC02171-201ENST00000508619 SIK1P57059 783 aa18.32■□□□□ 0.52
LINC02171-201ENST00000508619 C4BP0C0L5 1744 aa18.32■□□□□ 0.52
LINC02171-201ENST00000508619 ZNF831Q5JPB2 1677 aa18.31■□□□□ 0.52
LINC02171-201ENST00000508619 SULT6B1Q6IMI4 303 aa18.31■□□□□ 0.52
LINC02171-201ENST00000508619 ZNF530Q6P9A1 599 aaPredicted RBP18.31■□□□□ 0.52
LINC02171-201ENST00000508619 AEBP1Q8IUX7 1158 aa18.31■□□□□ 0.52
LINC02171-201ENST00000508619 COL23A1Q86Y22 540 aaPredicted RBP18.3■□□□□ 0.52
LINC02171-201ENST00000508619 KDM6AO15550 1401 aaPredicted RBP18.3■□□□□ 0.52
LINC02171-201ENST00000508619 C1orf141Q5JVX7 400 aa18.29■□□□□ 0.52
LINC02171-201ENST00000508619 ATG3Q9NT62 314 aa18.29■□□□□ 0.52
LINC02171-201ENST00000508619 ASAP1Q9ULH1 1129 aa18.29■□□□□ 0.52
LINC02171-201ENST00000508619 SSFA2P28290 1259 aa18.28■□□□□ 0.52
LINC02171-201ENST00000508619 AK7Q96M32 723 aa18.28■□□□□ 0.52
LINC02171-201ENST00000508619 UBR3Q6ZT12 1888 aa18.27■□□□□ 0.52
LINC02171-201ENST00000508619 CC2D1BQ5T0F9 858 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms