RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 CLUAP1Q96AJ1 413 aa10.24□□□□□ -0.77
UBE2D3-225ENST00000508476 POM121CA8CG34 1229 aa10.23□□□□□ -0.77
UBE2D3-225ENST00000508476 H3BM21 787 aa10.23□□□□□ -0.77
UBE2D3-225ENST00000508476 TRAK2O60296 914 aa10.23□□□□□ -0.77
UBE2D3-225ENST00000508476 SEMA3FQ13275 785 aa10.23□□□□□ -0.77
UBE2D3-225ENST00000508476 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.23□□□□□ -0.77
UBE2D3-225ENST00000508476 SLFNL1Q499Z3 407 aa10.23□□□□□ -0.77
UBE2D3-225ENST00000508476 PIK3CDO00329 1044 aa10.22□□□□□ -0.77
UBE2D3-225ENST00000508476 DOLKQ9UPQ8 538 aa10.22□□□□□ -0.77
UBE2D3-225ENST00000508476 ERBB4Q15303 1308 aa10.22□□□□□ -0.77
UBE2D3-225ENST00000508476 A0A1W2PRU2 124 aa10.21□□□□□ -0.77
UBE2D3-225ENST00000508476 MEN1O00255 615 aa10.21□□□□□ -0.77
UBE2D3-225ENST00000508476 PTSQ03393 145 aa10.21□□□□□ -0.77
UBE2D3-225ENST00000508476 ARHGEF10LQ9HCE6 1279 aa10.21□□□□□ -0.77
UBE2D3-225ENST00000508476 RAB6BQ9NRW1 208 aa10.21□□□□□ -0.77
UBE2D3-225ENST00000508476 PPFIA3O75145 1194 aa10.2□□□□□ -0.78
UBE2D3-225ENST00000508476 OXLD1Q5BKU9 147 aa10.2□□□□□ -0.78
UBE2D3-225ENST00000508476 ALG2Q9H553 416 aa10.2□□□□□ -0.78
UBE2D3-225ENST00000508476 CHIC2Q9UKJ5 165 aa10.2□□□□□ -0.78
UBE2D3-225ENST00000508476 STAU1O95793 577 aaKnown RBP10.19□□□□□ -0.78
UBE2D3-225ENST00000508476 SOX11P35716 441 aa10.19□□□□□ -0.78
UBE2D3-225ENST00000508476 CYP2U1Q7Z449 544 aa10.19□□□□□ -0.78
UBE2D3-225ENST00000508476 NPAS3Q8IXF0 933 aa10.19□□□□□ -0.78
UBE2D3-225ENST00000508476 ADAMTS19Q8TE59 1207 aa10.19□□□□□ -0.78
UBE2D3-225ENST00000508476 SLC16A10Q8TF71 515 aa10.19□□□□□ -0.78
UBE2D3-225ENST00000508476 TRIM52Q96A61 297 aa10.18□□□□□ -0.78
UBE2D3-225ENST00000508476 ESF1Q9H501 851 aaKnown RBP10.18□□□□□ -0.78
UBE2D3-225ENST00000508476 MYCP01106 439 aaPredicted RBP10.17□□□□□ -0.78
UBE2D3-225ENST00000508476 RNF144AP50876 292 aaPredicted RBP10.17□□□□□ -0.78
UBE2D3-225ENST00000508476 PRICKLE2Q7Z3G6 844 aa10.17□□□□□ -0.78
UBE2D3-225ENST00000508476 WWC1Q8IX03 1113 aa10.17□□□□□ -0.78
UBE2D3-225ENST00000508476 PLPP7Q8NBV4 271 aa10.17□□□□□ -0.78
UBE2D3-225ENST00000508476 RHOQP17081 205 aa10.16□□□□□ -0.78
UBE2D3-225ENST00000508476 GMPRP36959 345 aa10.16□□□□□ -0.78
UBE2D3-225ENST00000508476 CLN3Q13286 438 aa10.16□□□□□ -0.78
UBE2D3-225ENST00000508476 CCDC155Q8N6L0 562 aa10.16□□□□□ -0.78
UBE2D3-225ENST00000508476 SENP3-EIF4A1A0A087X0R7 540 aa10.15□□□□□ -0.78
UBE2D3-225ENST00000508476 SLC35F4A4IF30 521 aa10.15□□□□□ -0.78
UBE2D3-225ENST00000508476 IL2RAP01589 272 aa10.15□□□□□ -0.78
UBE2D3-225ENST00000508476 LYSMD3Q7Z3D4 306 aa10.15□□□□□ -0.78
UBE2D3-225ENST00000508476 FNBP4Q8N3X1 1017 aaPredicted RBP10.15□□□□□ -0.78
UBE2D3-225ENST00000508476 IRF7Q92985 503 aa10.15□□□□□ -0.78
UBE2D3-225ENST00000508476 USP4Q13107 963 aa10.14□□□□□ -0.79
UBE2D3-225ENST00000508476 WIPF1O43516 503 aa10.13□□□□□ -0.79
UBE2D3-225ENST00000508476 GNRH1P01148 92 aa10.13□□□□□ -0.79
UBE2D3-225ENST00000508476 PROSER2Q86WR7 435 aaPredicted RBP10.13□□□□□ -0.79
UBE2D3-225ENST00000508476 NLRP3Q96P20 1036 aa10.13□□□□□ -0.79
UBE2D3-225ENST00000508476 SKIP12755 728 aa10.12□□□□□ -0.79
UBE2D3-225ENST00000508476 MAP7D1Q3KQU3 841 aa10.12□□□□□ -0.79
UBE2D3-225ENST00000508476 HDGFL1Q5TGJ6 251 aa10.12□□□□□ -0.79
UBE2D3-225ENST00000508476 CNKSR1Q969H4 720 aa10.12□□□□□ -0.79
UBE2D3-225ENST00000508476 VSIG8P0DPA2 414 aa10.11□□□□□ -0.79
UBE2D3-225ENST00000508476 GPC1P35052 558 aa10.11□□□□□ -0.79
UBE2D3-225ENST00000508476 POU4F2Q12837 409 aa10.11□□□□□ -0.79
UBE2D3-225ENST00000508476 SLC27A3Q5K4L6 730 aa10.11□□□□□ -0.79
UBE2D3-225ENST00000508476 GRIP2Q9C0E4 1043 aa10.11□□□□□ -0.79
UBE2D3-225ENST00000508476 ETNK1Q9HBU6 452 aa10.11□□□□□ -0.79
UBE2D3-225ENST00000508476 DEPDC4Q8N2C3 294 aa10.1□□□□□ -0.79
UBE2D3-225ENST00000508476 GPR161Q8N6U8 529 aaKnown RBP10.1□□□□□ -0.79
UBE2D3-225ENST00000508476 UCN2Q96RP3 112 aa10.1□□□□□ -0.79
UBE2D3-225ENST00000508476 ESYT1Q9BSJ8 1104 aa10.1□□□□□ -0.79
UBE2D3-225ENST00000508476 HRH3Q9Y5N1 445 aa10.1□□□□□ -0.79
UBE2D3-225ENST00000508476 CENPCQ03188 943 aa10.09□□□□□ -0.79
UBE2D3-225ENST00000508476 ITGA6P23229 1130 aa10.08□□□□□ -0.8
UBE2D3-225ENST00000508476 SCNN1DP51172 638 aa10.08□□□□□ -0.8
UBE2D3-225ENST00000508476 TBC1D9Q6ZT07 1266 aa10.08□□□□□ -0.8
UBE2D3-225ENST00000508476 XAGE2Q96GT9 111 aa10.08□□□□□ -0.8
UBE2D3-225ENST00000508476 CUEDC1Q9NWM3 386 aaPredicted RBP10.08□□□□□ -0.8
UBE2D3-225ENST00000508476 NCOA4Q13772 614 aa10.07□□□□□ -0.8
UBE2D3-225ENST00000508476 SIRT1Q96EB6 747 aa10.07□□□□□ -0.8
UBE2D3-225ENST00000508476 FHDC1Q9C0D6 1143 aaPredicted RBP10.07□□□□□ -0.8
UBE2D3-225ENST00000508476 A6NJR5 290 aa10.06□□□□□ -0.8
UBE2D3-225ENST00000508476 USP17L5A8MUK1 530 aa10.06□□□□□ -0.8
UBE2D3-225ENST00000508476 NBPF10Q6P3W6 841 aaKnown RBP10.06□□□□□ -0.8
UBE2D3-225ENST00000508476 VWA5B2Q8N398 1253 aa10.06□□□□□ -0.8
UBE2D3-225ENST00000508476 NBPF15Q8N660 670 aa10.06□□□□□ -0.8
UBE2D3-225ENST00000508476 NFATC2IPQ8NCF5 419 aa10.06□□□□□ -0.8
UBE2D3-225ENST00000508476 GLMNQ92990 594 aa10.06□□□□□ -0.8
UBE2D3-225ENST00000508476 PCDHGA11Q9Y5H2 935 aa10.06□□□□□ -0.8
UBE2D3-225ENST00000508476 CDC14CA4D256 554 aa10.05□□□□□ -0.8
UBE2D3-225ENST00000508476 GDF10P55107 478 aa10.05□□□□□ -0.8
UBE2D3-225ENST00000508476 EML3Q32P44 896 aa10.05□□□□□ -0.8
UBE2D3-225ENST00000508476 SPATA31C2B4DYI2 1134 aa10.04□□□□□ -0.8
UBE2D3-225ENST00000508476 ESCO1Q5FWF5 840 aa10.04□□□□□ -0.8
UBE2D3-225ENST00000508476 NANOS1Q8WY41 292 aaKnown RBP10.04□□□□□ -0.8
UBE2D3-225ENST00000508476 ZSCAN10Q96SZ4 725 aaPredicted RBP10.04□□□□□ -0.8
UBE2D3-225ENST00000508476 TMEM229AB2RXF0 380 aa10.03□□□□□ -0.8
UBE2D3-225ENST00000508476 WASLO00401 505 aaPredicted RBP10.03□□□□□ -0.8
UBE2D3-225ENST00000508476 INHAP05111 366 aa10.03□□□□□ -0.8
UBE2D3-225ENST00000508476 LORP23490 312 aaPredicted RBP10.03□□□□□ -0.8
UBE2D3-225ENST00000508476 PHKA2P46019 1235 aa10.03□□□□□ -0.8
UBE2D3-225ENST00000508476 KRT76Q01546 638 aa10.03□□□□□ -0.8
UBE2D3-225ENST00000508476 GTF2IP78347 998 aa10.02□□□□□ -0.81
UBE2D3-225ENST00000508476 TLR1Q15399 786 aa10.02□□□□□ -0.81
UBE2D3-225ENST00000508476 TAS1R3Q7RTX0 852 aa10.02□□□□□ -0.81
UBE2D3-225ENST00000508476 SERTAD1Q9UHV2 236 aa10.02□□□□□ -0.81
UBE2D3-225ENST00000508476 NOD1Q9Y239 953 aa10.02□□□□□ -0.81
UBE2D3-225ENST00000508476 USP17L3A6NCW0 530 aa10.01□□□□□ -0.81
UBE2D3-225ENST00000508476 USP17L4A6NCW7 530 aa10.01□□□□□ -0.81
UBE2D3-225ENST00000508476 RNFT1Q5M7Z0 435 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms