RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 PRICKLE2Q7Z3G6 844 aa11.13□□□□□ -0.63
TRAPPC13-209ENST00000508304 GOPCQ9HD26 462 aa11.13□□□□□ -0.63
TRAPPC13-209ENST00000508304 ZBBXA8MT70 800 aa11.12□□□□□ -0.63
TRAPPC13-209ENST00000508304 DNMT3AQ9Y6K1 912 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC13-209ENST00000508304 ATP5J2-PTCD1G3V325 749 aa11.11□□□□□ -0.63
TRAPPC13-209ENST00000508304 GIGYF1O75420 1035 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC13-209ENST00000508304 RHOQP17081 205 aa11.11□□□□□ -0.63
TRAPPC13-209ENST00000508304 MARSP56192 900 aaKnown RBP11.11□□□□□ -0.63
TRAPPC13-209ENST00000508304 TMEM259Q4ZIN3 620 aa11.11□□□□□ -0.63
TRAPPC13-209ENST00000508304 ZNF837Q96EG3 531 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC13-209ENST00000508304 GPC1P35052 558 aa11.1□□□□□ -0.63
TRAPPC13-209ENST00000508304 KANK3Q6NY19 840 aa11.1□□□□□ -0.63
TRAPPC13-209ENST00000508304 SCARF2Q96GP6 870 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC13-209ENST00000508304 GMCL1Q96IK5 515 aa11.1□□□□□ -0.63
TRAPPC13-209ENST00000508304 CELA2BP08218 269 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC13-209ENST00000508304 FBXO45P0C2W1 286 aa11.09□□□□□ -0.63
TRAPPC13-209ENST00000508304 TRIM22Q8IYM9 498 aa11.09□□□□□ -0.63
TRAPPC13-209ENST00000508304 GJD4Q96KN9 370 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC13-209ENST00000508304 PCDHB9Q9Y5E1 797 aa11.09□□□□□ -0.63
TRAPPC13-209ENST00000508304 ERVK-9P63128 1117 aa11.08□□□□□ -0.64
TRAPPC13-209ENST00000508304 CCDC125Q86Z20 511 aa11.08□□□□□ -0.64
TRAPPC13-209ENST00000508304 PCMTD1Q96MG8 357 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC13-209ENST00000508304 MAP3K10Q02779 954 aa11.07□□□□□ -0.64
TRAPPC13-209ENST00000508304 MBIPQ9NS73 344 aa11.07□□□□□ -0.64
TRAPPC13-209ENST00000508304 A0A1W2PRU2 124 aa11.06□□□□□ -0.64
TRAPPC13-209ENST00000508304 MEN1O00255 615 aa11.06□□□□□ -0.64
TRAPPC13-209ENST00000508304 DBN1Q16643 649 aa11.06□□□□□ -0.64
TRAPPC13-209ENST00000508304 CC2D2BQ6DHV5 1058 aa11.05□□□□□ -0.64
TRAPPC13-209ENST00000508304 DYRK1BQ9Y463 629 aa11.05□□□□□ -0.64
TRAPPC13-209ENST00000508304 GPR25O00155 361 aa11.04□□□□□ -0.64
TRAPPC13-209ENST00000508304 IGHA1P01876 353 aa11.04□□□□□ -0.64
TRAPPC13-209ENST00000508304 GPAT2Q6NUI2 795 aa11.04□□□□□ -0.64
TRAPPC13-209ENST00000508304 FOXK2Q01167 660 aa11.03□□□□□ -0.64
TRAPPC13-209ENST00000508304 RNF20Q5VTR2 975 aa11.03□□□□□ -0.64
TRAPPC13-209ENST00000508304 IGF1RP08069 1367 aa11.03□□□□□ -0.64
TRAPPC13-209ENST00000508304 POU4F2Q12837 409 aa11.02□□□□□ -0.65
TRAPPC13-209ENST00000508304 FOXR1Q6PIV2 292 aa11.02□□□□□ -0.65
TRAPPC13-209ENST00000508304 RIPOR1Q6ZS17 1223 aa11.02□□□□□ -0.65
TRAPPC13-209ENST00000508304 GRIP2Q9C0E4 1043 aa11.02□□□□□ -0.65
TRAPPC13-209ENST00000508304 ENAMQ9NRM1 1142 aa11.02□□□□□ -0.65
TRAPPC13-209ENST00000508304 SCTRP47872 440 aa11.01□□□□□ -0.65
TRAPPC13-209ENST00000508304 MCCD1P59942 119 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC13-209ENST00000508304 CLN3Q13286 438 aa11.01□□□□□ -0.65
TRAPPC13-209ENST00000508304 H7C1W4 665 aa11□□□□□ -0.65
TRAPPC13-209ENST00000508304 NR1H3Q13133 447 aa11□□□□□ -0.65
TRAPPC13-209ENST00000508304 SLC27A3Q5K4L6 730 aa11□□□□□ -0.65
TRAPPC13-209ENST00000508304 CYP2U1Q7Z449 544 aa11□□□□□ -0.65
TRAPPC13-209ENST00000508304 NLRP3Q96P20 1036 aa11□□□□□ -0.65
TRAPPC13-209ENST00000508304 SPATA31C2B4DYI2 1134 aa10.99□□□□□ -0.65
TRAPPC13-209ENST00000508304 NBPF10Q6P3W6 841 aaKnown RBP10.99□□□□□ -0.65
TRAPPC13-209ENST00000508304 NBPF15Q8N660 670 aa10.99□□□□□ -0.65
TRAPPC13-209ENST00000508304 GTPBP3Q969Y2 492 aaKnown RBP10.99□□□□□ -0.65
TRAPPC13-209ENST00000508304 TRAK2O60296 914 aa10.98□□□□□ -0.65
TRAPPC13-209ENST00000508304 WDR44Q5JSH3 913 aa10.98□□□□□ -0.65
TRAPPC13-209ENST00000508304 GAS2L1Q99501 681 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC13-209ENST00000508304 OSBPL3Q9H4L5 887 aa10.98□□□□□ -0.65
TRAPPC13-209ENST00000508304 GPR37L1O60883 481 aa10.97□□□□□ -0.65
TRAPPC13-209ENST00000508304 BCRP11274 1271 aa10.97□□□□□ -0.65
TRAPPC13-209ENST00000508304 ACDQ96AP0 544 aa10.97□□□□□ -0.65
TRAPPC13-209ENST00000508304 BCANQ96GW7 911 aa10.97□□□□□ -0.65
TRAPPC13-209ENST00000508304 CNTNAP5Q8WYK1 1306 aa10.96□□□□□ -0.65
TRAPPC13-209ENST00000508304 ZNF592Q92610 1267 aa10.96□□□□□ -0.65
TRAPPC13-209ENST00000508304 TRERF1Q96PN7 1200 aa10.96□□□□□ -0.65
TRAPPC13-209ENST00000508304 ARHGEF10LQ9HCE6 1279 aa10.96□□□□□ -0.65
TRAPPC13-209ENST00000508304 PCDHB11Q9Y5F2 797 aa10.96□□□□□ -0.65
TRAPPC13-209ENST00000508304 PHF20L1A8MW92 1017 aa10.95□□□□□ -0.66
TRAPPC13-209ENST00000508304 SOCS7O14512 581 aa10.95□□□□□ -0.66
TRAPPC13-209ENST00000508304 WASLO00401 505 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC13-209ENST00000508304 TIMMDC1Q9NPL8 285 aa10.94□□□□□ -0.66
TRAPPC13-209ENST00000508304 LRRC4BQ9NT99 713 aa10.94□□□□□ -0.66
TRAPPC13-209ENST00000508304 F11P03951 625 aa10.93□□□□□ -0.66
TRAPPC13-209ENST00000508304 MX2P20592 715 aa10.93□□□□□ -0.66
TRAPPC13-209ENST00000508304 TAS1R3Q7RTX0 852 aa10.93□□□□□ -0.66
TRAPPC13-209ENST00000508304 BANK1Q8NDB2 785 aa10.93□□□□□ -0.66
TRAPPC13-209ENST00000508304 IL27Q8NEV9 243 aa10.93□□□□□ -0.66
TRAPPC13-209ENST00000508304 NUCKS1Q9H1E3 243 aaKnown RBP10.93□□□□□ -0.66
TRAPPC13-209ENST00000508304 ZNF330Q9Y3S2 320 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC13-209ENST00000508304 BEND7Q8N7W2 519 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC13-209ENST00000508304 NEDD1Q8NHV4 660 aa10.92□□□□□ -0.66
TRAPPC13-209ENST00000508304 DCAF5Q96JK2 942 aa10.92□□□□□ -0.66
TRAPPC13-209ENST00000508304 THBS1P07996 1170 aa10.91□□□□□ -0.66
TRAPPC13-209ENST00000508304 PLA2G4EQ3MJ16 856 aa10.91□□□□□ -0.66
TRAPPC13-209ENST00000508304 MTMR14Q8NCE2 650 aa10.91□□□□□ -0.66
TRAPPC13-209ENST00000508304 GNRH1P01148 92 aa10.9□□□□□ -0.66
TRAPPC13-209ENST00000508304 ITGB2P05107 769 aa10.9□□□□□ -0.66
TRAPPC13-209ENST00000508304 NEUROD2Q15784 382 aa10.9□□□□□ -0.66
TRAPPC13-209ENST00000508304 ESYT1Q9BSJ8 1104 aa10.9□□□□□ -0.66
TRAPPC13-209ENST00000508304 RAB6BQ9NRW1 208 aa10.9□□□□□ -0.66
TRAPPC13-209ENST00000508304 NSFL1CQ9UNZ2 370 aaKnown RBP10.9□□□□□ -0.66
TRAPPC13-209ENST00000508304 NDUFB9Q9Y6M9 179 aa10.9□□□□□ -0.66
TRAPPC13-209ENST00000508304 IL2RAP01589 272 aa10.89□□□□□ -0.67
TRAPPC13-209ENST00000508304 PODNQ7Z5L7 613 aa10.89□□□□□ -0.67
TRAPPC13-209ENST00000508304 CNKSR1Q969H4 720 aa10.89□□□□□ -0.67
TRAPPC13-209ENST00000508304 ESF1Q9H501 851 aaKnown RBP10.89□□□□□ -0.67
TRAPPC13-209ENST00000508304 HRH3Q9Y5N1 445 aa10.89□□□□□ -0.67
TRAPPC13-209ENST00000508304 OIP5O43482 229 aa10.88□□□□□ -0.67
TRAPPC13-209ENST00000508304 CENPCQ03188 943 aa10.88□□□□□ -0.67
TRAPPC13-209ENST00000508304 CFHR5Q9BXR6 569 aa10.88□□□□□ -0.67
TRAPPC13-209ENST00000508304 MSTNO14793 375 aa10.87□□□□□ -0.67
TRAPPC13-209ENST00000508304 MAP2K3P46734 347 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms