RNA–Protein interactions for RNA: ENST00000508283.5

TRIO-210, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-210ENST00000508283 BTAF1O14981 1849 aa11.72□□□□□ -0.53
TRIO-210ENST00000508283 PNPLA7Q6ZV29 1317 aa11.71□□□□□ -0.53
TRIO-210ENST00000508283 AMPHP49418 695 aa11.71□□□□□ -0.53
TRIO-210ENST00000508283 NBPF6Q5VWK0 638 aa11.71□□□□□ -0.53
TRIO-210ENST00000508283 NBPF4Q96M43 638 aa11.71□□□□□ -0.53
TRIO-210ENST00000508283 NSD2O96028 1365 aa11.7□□□□□ -0.54
TRIO-210ENST00000508283 ANKRD36BQ8N2N9 1353 aa11.7□□□□□ -0.54
TRIO-210ENST00000508283 RRS1Q15050 365 aaKnown RBP11.69□□□□□ -0.54
TRIO-210ENST00000508283 SYTL4Q96C24 671 aaPredicted RBP11.69□□□□□ -0.54
TRIO-210ENST00000508283 TFCP2L1Q9NZI6 479 aa11.69□□□□□ -0.54
TRIO-210ENST00000508283 GGNBP2Q9H3C7 697 aa11.68□□□□□ -0.54
TRIO-210ENST00000508283 CGNL1Q0VF96 1302 aa11.67□□□□□ -0.54
TRIO-210ENST00000508283 MEGF6O75095 1541 aa11.67□□□□□ -0.54
TRIO-210ENST00000508283 FAM208AQ9UK61 1670 aaKnown RBP11.66□□□□□ -0.54
TRIO-210ENST00000508283 POLD1P28340 1107 aa11.66□□□□□ -0.54
TRIO-210ENST00000508283 GPR162Q16538 588 aa11.66□□□□□ -0.54
TRIO-210ENST00000508283 HSP90AB2PQ58FF8 381 aa11.66□□□□□ -0.54
TRIO-210ENST00000508283 COL23A1Q86Y22 540 aaPredicted RBP11.66□□□□□ -0.54
TRIO-210ENST00000508283 USHBP1Q8N6Y0 703 aa11.66□□□□□ -0.54
TRIO-210ENST00000508283 CCNL1Q9UK58 526 aaPredicted RBP11.66□□□□□ -0.54
TRIO-210ENST00000508283 RTL1A6NKG5 1358 aa11.66□□□□□ -0.54
TRIO-210ENST00000508283 NLGN2Q8NFZ4 835 aa11.65□□□□□ -0.54
TRIO-210ENST00000508283 CARD14Q9BXL6 1004 aa11.65□□□□□ -0.54
TRIO-210ENST00000508283 COL24A1Q17RW2 1714 aa11.65□□□□□ -0.54
TRIO-210ENST00000508283 CLSPNQ9HAW4 1339 aa11.64□□□□□ -0.55
TRIO-210ENST00000508283 TMF1P82094 1093 aa11.64□□□□□ -0.55
TRIO-210ENST00000508283 RAPGEF4Q8WZA2 1011 aa11.64□□□□□ -0.55
TRIO-210ENST00000508283 INSRP06213 1382 aa11.64□□□□□ -0.55
TRIO-210ENST00000508283 CYP27B1O15528 508 aa11.63□□□□□ -0.55
TRIO-210ENST00000508283 TATP17735 454 aaPredicted RBP11.63□□□□□ -0.55
TRIO-210ENST00000508283 C1QTNF8P60827 252 aa11.63□□□□□ -0.55
TRIO-210ENST00000508283 USP47Q96K76 1375 aa11.63□□□□□ -0.55
TRIO-210ENST00000508283 QSER1Q2KHR3 1735 aa11.63□□□□□ -0.55
TRIO-210ENST00000508283 RGPD2P0DJD1 1756 aa11.62□□□□□ -0.55
TRIO-210ENST00000508283 SHANK3Q9BYB0 1731 aa11.62□□□□□ -0.55
TRIO-210ENST00000508283 KIF24Q5T7B8 1368 aa11.62□□□□□ -0.55
TRIO-210ENST00000508283 CHD4Q14839 1912 aa11.62□□□□□ -0.55
TRIO-210ENST00000508283 LY75O60449 1722 aa11.61□□□□□ -0.55
TRIO-210ENST00000508283 YBX3P16989 372 aaKnown RBP eCLIP11.61□□□□□ -0.55
TRIO-210ENST00000508283 NKX1-1Q15270 411 aaPredicted RBP11.61□□□□□ -0.55
TRIO-210ENST00000508283 KLHL34Q8N239 644 aa11.61□□□□□ -0.55
TRIO-210ENST00000508283 FLT4P35916 1363 aa11.6□□□□□ -0.55
TRIO-210ENST00000508283 CDCA8Q53HL2 280 aa11.6□□□□□ -0.55
TRIO-210ENST00000508283 MPRIPQ6WCQ1 1025 aa11.6□□□□□ -0.55
TRIO-210ENST00000508283 EMILIN1Q9Y6C2 1016 aa11.6□□□□□ -0.55
TRIO-210ENST00000508283 DOT1LQ8TEK3 1739 aa11.6□□□□□ -0.55
TRIO-210ENST00000508283 PCDH11XQ9BZA7 1347 aa11.6□□□□□ -0.55
TRIO-210ENST00000508283 PCDH11YQ9BZA8 1340 aa11.6□□□□□ -0.55
TRIO-210ENST00000508283 TUBGCP6Q96RT7 1819 aa11.59□□□□□ -0.55
TRIO-210ENST00000508283 MSH5O43196 834 aa11.59□□□□□ -0.55
TRIO-210ENST00000508283 GRIN3BO60391 1043 aa11.59□□□□□ -0.55
TRIO-210ENST00000508283 HMGB2P26583 209 aaKnown RBP11.59□□□□□ -0.55
TRIO-210ENST00000508283 MSL1Q68DK7 614 aa11.59□□□□□ -0.55
TRIO-210ENST00000508283 AMIGO3Q86WK7 504 aa11.59□□□□□ -0.55
TRIO-210ENST00000508283 FLAD1Q8NFF5 587 aa11.59□□□□□ -0.55
TRIO-210ENST00000508283 PIGBQ92521 554 aa11.59□□□□□ -0.55
TRIO-210ENST00000508283 SMG6Q86US8 1419 aaKnown RBP11.59□□□□□ -0.55
TRIO-210ENST00000508283 PALLDQ8WX93 1383 aa11.58□□□□□ -0.56
TRIO-210ENST00000508283 PELP1Q8IZL8 1130 aaKnown RBP11.58□□□□□ -0.56
TRIO-210ENST00000508283 SMARCC1Q92922 1105 aaPredicted RBP11.58□□□□□ -0.56
TRIO-210ENST00000508283 CD2APQ9Y5K6 639 aa11.58□□□□□ -0.56
TRIO-210ENST00000508283 WASHC2AQ641Q2 1341 aa11.58□□□□□ -0.56
TRIO-210ENST00000508283 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.57□□□□□ -0.56
TRIO-210ENST00000508283 NCAPD2Q15021 1401 aa11.57□□□□□ -0.56
TRIO-210ENST00000508283 SENP3-EIF4A1A0A087X0R7 540 aa11.56□□□□□ -0.56
TRIO-210ENST00000508283 SMIM5Q71RC9 77 aa11.56□□□□□ -0.56
TRIO-210ENST00000508283 EYA1Q99502 592 aa11.56□□□□□ -0.56
TRIO-210ENST00000508283 NSD3Q9BZ95 1437 aa11.55□□□□□ -0.56
TRIO-210ENST00000508283 POLKQ9UBT6 870 aa11.55□□□□□ -0.56
TRIO-210ENST00000508283 SPG7Q9UQ90 795 aa11.55□□□□□ -0.56
TRIO-210ENST00000508283 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.54□□□□□ -0.56
TRIO-210ENST00000508283 LOC102724428A0A0B4J2F2 783 aa11.54□□□□□ -0.56
TRIO-210ENST00000508283 PPM1GO15355 546 aaPredicted RBP11.54□□□□□ -0.56
TRIO-210ENST00000508283 GIGYF1O75420 1035 aaPredicted RBP11.54□□□□□ -0.56
TRIO-210ENST00000508283 SIK1P57059 783 aa11.54□□□□□ -0.56
TRIO-210ENST00000508283 ASAP1Q9ULH1 1129 aa11.54□□□□□ -0.56
TRIO-210ENST00000508283 TIMELESSQ9UNS1 1208 aa11.54□□□□□ -0.56
TRIO-210ENST00000508283 ITPK1Q13572 414 aa11.53□□□□□ -0.56
TRIO-210ENST00000508283 LINC00116Q8NCU8 138 aa11.53□□□□□ -0.56
TRIO-210ENST00000508283 AK7Q96M32 723 aa11.53□□□□□ -0.56
TRIO-210ENST00000508283 PHKG2P15735 406 aa11.52□□□□□ -0.57
TRIO-210ENST00000508283 SSFA2P28290 1259 aa11.52□□□□□ -0.57
TRIO-210ENST00000508283 ATG3Q9NT62 314 aa11.52□□□□□ -0.57
TRIO-210ENST00000508283 C5P01031 1676 aa11.52□□□□□ -0.57
TRIO-210ENST00000508283 TOGARAM1Q9Y4F4 1720 aa11.52□□□□□ -0.57
TRIO-210ENST00000508283 TAF1LQ8IZX4 1826 aa11.51□□□□□ -0.57
TRIO-210ENST00000508283 ZNF316A6NFI3 1004 aaPredicted RBP11.51□□□□□ -0.57
TRIO-210ENST00000508283 PHF14O94880 888 aa11.51□□□□□ -0.57
TRIO-210ENST00000508283 EIF4A2Q14240 407 aaKnown RBP11.51□□□□□ -0.57
TRIO-210ENST00000508283 IFNL2Q8IZJ0 200 aa11.51□□□□□ -0.57
TRIO-210ENST00000508283 TMOD3Q9NYL9 352 aa11.51□□□□□ -0.57
TRIO-210ENST00000508283 C4BP0C0L5 1744 aa11.5□□□□□ -0.57
TRIO-210ENST00000508283 PKD1L3Q7Z443 1732 aa11.5□□□□□ -0.57
TRIO-210ENST00000508283 SLC4A9Q96Q91 983 aa11.5□□□□□ -0.57
TRIO-210ENST00000508283 ITGB4P16144 1822 aa11.5□□□□□ -0.57
TRIO-210ENST00000508283 KIF20BQ96Q89 1820 aa11.5□□□□□ -0.57
TRIO-210ENST00000508283 MAP2P11137 1827 aaKnown RBP11.49□□□□□ -0.57
TRIO-210ENST00000508283 ATP6V1AP38606 617 aa11.49□□□□□ -0.57
TRIO-210ENST00000508283 IGSF1Q8N6C5 1336 aa11.49□□□□□ -0.57
TRIO-210ENST00000508283 ADCY9O60503 1353 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms