RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 ZCRB1Q8TBF4 217 aaKnown RBP12.82□□□□□ -0.36
DDX41-209ENST00000508279 RREB1Q92766 1687 aa12.82□□□□□ -0.36
DDX41-209ENST00000508279 NUP188Q5SRE5 1749 aa12.82□□□□□ -0.36
DDX41-209ENST00000508279 NSD2O96028 1365 aa12.81□□□□□ -0.36
DDX41-209ENST00000508279 CC2D1BQ5T0F9 858 aaKnown RBP12.81□□□□□ -0.36
DDX41-209ENST00000508279 SYTL4Q96C24 671 aaPredicted RBP12.81□□□□□ -0.36
DDX41-209ENST00000508279 SHANK3Q9BYB0 1731 aa12.81□□□□□ -0.36
DDX41-209ENST00000508279 WASHC2AQ641Q2 1341 aa12.81□□□□□ -0.36
DDX41-209ENST00000508279 NHSQ6T4R5 1651 aa12.8□□□□□ -0.36
DDX41-209ENST00000508279 BTAF1O14981 1849 aa12.8□□□□□ -0.36
DDX41-209ENST00000508279 PARD3Q8TEW0 1356 aa12.8□□□□□ -0.36
DDX41-209ENST00000508279 DOT1LQ8TEK3 1739 aa12.79□□□□□ -0.36
DDX41-209ENST00000508279 EIF4A2Q14240 407 aaKnown RBP12.79□□□□□ -0.36
DDX41-209ENST00000508279 NBPF14Q5TI25 921 aa12.79□□□□□ -0.36
DDX41-209ENST00000508279 EYA1Q99502 592 aa12.79□□□□□ -0.36
DDX41-209ENST00000508279 BCL9O00512 1426 aa12.79□□□□□ -0.36
DDX41-209ENST00000508279 AMER1Q5JTC6 1135 aaPredicted RBP12.78□□□□□ -0.36
DDX41-209ENST00000508279 RGPD3A6NKT7 1758 aaPredicted RBP12.77□□□□□ -0.36
DDX41-209ENST00000508279 RGPD4Q7Z3J3 1758 aa12.77□□□□□ -0.36
DDX41-209ENST00000508279 PLSCR1O15162 318 aa12.77□□□□□ -0.37
DDX41-209ENST00000508279 PRIM1P49642 420 aaKnown RBP12.76□□□□□ -0.37
DDX41-209ENST00000508279 PER1O15534 1290 aaPredicted RBP12.75□□□□□ -0.37
DDX41-209ENST00000508279 TXNRD1Q16881 649 aa12.75□□□□□ -0.37
DDX41-209ENST00000508279 PCDH11XQ9BZA7 1347 aa12.75□□□□□ -0.37
DDX41-209ENST00000508279 PCDH11YQ9BZA8 1340 aa12.75□□□□□ -0.37
DDX41-209ENST00000508279 PKD1L3Q7Z443 1732 aa12.74□□□□□ -0.37
DDX41-209ENST00000508279 PROM2Q8N271 834 aa12.74□□□□□ -0.37
DDX41-209ENST00000508279 SPG7Q9UQ90 795 aa12.74□□□□□ -0.37
DDX41-209ENST00000508279 MTHFSP49914 203 aa12.73□□□□□ -0.37
DDX41-209ENST00000508279 ITGB4P16144 1822 aa12.72□□□□□ -0.37
DDX41-209ENST00000508279 CYP27B1O15528 508 aa12.72□□□□□ -0.37
DDX41-209ENST00000508279 ANO8Q9HCE9 1232 aaPredicted RBP12.72□□□□□ -0.37
DDX41-209ENST00000508279 IGSF1Q8N6C5 1336 aa12.71□□□□□ -0.37
DDX41-209ENST00000508279 KCNQ4P56696 695 aa12.71□□□□□ -0.37
DDX41-209ENST00000508279 MPRIPQ6WCQ1 1025 aa12.71□□□□□ -0.37
DDX41-209ENST00000508279 AEBP1Q8IUX7 1158 aa12.71□□□□□ -0.37
DDX41-209ENST00000508279 STK32BQ9NY57 414 aa12.71□□□□□ -0.37
DDX41-209ENST00000508279 TOGARAM1Q9Y4F4 1720 aa12.71□□□□□ -0.38
DDX41-209ENST00000508279 NCAPD2Q15021 1401 aa12.71□□□□□ -0.38
DDX41-209ENST00000508279 SULT6B1Q6IMI4 303 aa12.7□□□□□ -0.38
DDX41-209ENST00000508279 SRCAPQ6ZRS2 3230 aa12.69□□□□□ -0.38
DDX41-209ENST00000508279 IL13P35225 146 aa12.69□□□□□ -0.38
DDX41-209ENST00000508279 IFNL2Q8IZJ0 200 aa12.69□□□□□ -0.38
DDX41-209ENST00000508279 HMOX1P09601 288 aa12.68□□□□□ -0.38
DDX41-209ENST00000508279 PLEKHO1Q53GL0 409 aaPredicted RBP12.68□□□□□ -0.38
DDX41-209ENST00000508279 ZNF530Q6P9A1 599 aaPredicted RBP12.68□□□□□ -0.38
DDX41-209ENST00000508279 LRRC4BQ9NT99 713 aa12.68□□□□□ -0.38
DDX41-209ENST00000508279 LRP5O75197 1615 aa12.68□□□□□ -0.38
DDX41-209ENST00000508279 LY75O60449 1722 aa12.68□□□□□ -0.38
DDX41-209ENST00000508279 DIAPH1O60610 1272 aaKnown RBP12.67□□□□□ -0.38
DDX41-209ENST00000508279 PHKG2P15735 406 aa12.67□□□□□ -0.38
DDX41-209ENST00000508279 SLC15A2Q16348 729 aa12.67□□□□□ -0.38
DDX41-209ENST00000508279 PDGFDQ9GZP0 370 aaPredicted RBP12.67□□□□□ -0.38
DDX41-209ENST00000508279 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.67□□□□□ -0.38
DDX41-209ENST00000508279 CCNL1Q9UK58 526 aaPredicted RBP12.67□□□□□ -0.38
DDX41-209ENST00000508279 NPC1L1Q9UHC9 1359 aa12.67□□□□□ -0.38
DDX41-209ENST00000508279 U2SURPO15042 1029 aaKnown RBP12.66□□□□□ -0.38
DDX41-209ENST00000508279 TMOD3Q9NYL9 352 aa12.66□□□□□ -0.38
DDX41-209ENST00000508279 ZBTB7AO95365 584 aa12.65□□□□□ -0.38
DDX41-209ENST00000508279 ZNF827Q17R98 1081 aa12.65□□□□□ -0.38
DDX41-209ENST00000508279 C1orf141Q5JVX7 400 aa12.65□□□□□ -0.38
DDX41-209ENST00000508279 SLC27A3Q5K4L6 730 aa12.65□□□□□ -0.38
DDX41-209ENST00000508279 PIGBQ92521 554 aa12.65□□□□□ -0.38
DDX41-209ENST00000508279 PPP1R1BQ9UD71 204 aaPredicted RBP12.65□□□□□ -0.38
DDX41-209ENST00000508279 VIRMAQ69YN4 1812 aaKnown RBP12.65□□□□□ -0.39
DDX41-209ENST00000508279 CASZ1Q86V15 1759 aa12.64□□□□□ -0.39
DDX41-209ENST00000508279 PAPPAQ13219 1627 aa12.64□□□□□ -0.39
DDX41-209ENST00000508279 NKX1-1Q15270 411 aaPredicted RBP12.64□□□□□ -0.39
DDX41-209ENST00000508279 AMOTQ4VCS5 1084 aa12.64□□□□□ -0.39
DDX41-209ENST00000508279 CFAP53Q96M91 514 aa12.64□□□□□ -0.39
DDX41-209ENST00000508279 SPON1Q9HCB6 807 aa12.64□□□□□ -0.39
DDX41-209ENST00000508279 ATF5Q9Y2D1 282 aaPredicted RBP12.64□□□□□ -0.39
DDX41-209ENST00000508279 PALLDQ8WX93 1383 aa12.64□□□□□ -0.39
DDX41-209ENST00000508279 TUBGCP6Q96RT7 1819 aa12.64□□□□□ -0.39
DDX41-209ENST00000508279 HSP90AB1P08238 724 aaKnown RBP12.63□□□□□ -0.39
DDX41-209ENST00000508279 TFCP2L1Q9NZI6 479 aa12.63□□□□□ -0.39
DDX41-209ENST00000508279 TAF1LQ8IZX4 1826 aa12.62□□□□□ -0.39
DDX41-209ENST00000508279 C5P01031 1676 aa12.62□□□□□ -0.39
DDX41-209ENST00000508279 PPP2R1AP30153 589 aa12.62□□□□□ -0.39
DDX41-209ENST00000508279 DDX10Q13206 875 aaKnown RBP12.62□□□□□ -0.39
DDX41-209ENST00000508279 SMARCC1Q92922 1105 aaPredicted RBP12.62□□□□□ -0.39
DDX41-209ENST00000508279 KDRP35968 1356 aa12.61□□□□□ -0.39
DDX41-209ENST00000508279 CABP4P57796 275 aa12.61□□□□□ -0.39
DDX41-209ENST00000508279 DCAF5Q96JK2 942 aa12.61□□□□□ -0.39
DDX41-209ENST00000508279 ASAP1Q9ULH1 1129 aa12.61□□□□□ -0.39
DDX41-209ENST00000508279 COL3A1P02461 1466 aaPredicted RBP12.6□□□□□ -0.39
DDX41-209ENST00000508279 AKT1S1Q96B36 256 aa12.6□□□□□ -0.39
DDX41-209ENST00000508279 SCN11AQ9UI33 1791 aa12.6□□□□□ -0.39
DDX41-209ENST00000508279 PLEKHG2Q9H7P9 1386 aa12.59□□□□□ -0.39
DDX41-209ENST00000508279 ERVV-2B6SEH9 535 aa12.59□□□□□ -0.39
DDX41-209ENST00000508279 RBM42Q9BTD8 480 aaKnown RBP12.59□□□□□ -0.39
DDX41-209ENST00000508279 NUDCQ9Y266 331 aa12.59□□□□□ -0.39
DDX41-209ENST00000508279 KDM6AO15550 1401 aaPredicted RBP12.59□□□□□ -0.39
DDX41-209ENST00000508279 QSER1Q2KHR3 1735 aa12.59□□□□□ -0.39
DDX41-209ENST00000508279 LOC102724428A0A0B4J2F2 783 aa12.58□□□□□ -0.4
DDX41-209ENST00000508279 U2AF1L5P0DN76 240 aaPredicted RBP12.58□□□□□ -0.4
DDX41-209ENST00000508279 ZEB1P37275 1124 aaPredicted RBP12.58□□□□□ -0.4
DDX41-209ENST00000508279 ATP6V1AP38606 617 aa12.58□□□□□ -0.4
DDX41-209ENST00000508279 SIK1P57059 783 aa12.58□□□□□ -0.4
DDX41-209ENST00000508279 U2AF1Q01081 240 aaKnown RBP eCLIP12.58□□□□□ -0.43e-7■■■■□ 19.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms