RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 EMILIN1Q9Y6C2 1016 aa19.78■□□□□ 0.76
RAB28-205ENST00000508274 SMG6Q86US8 1419 aaKnown RBP19.78■□□□□ 0.76
RAB28-205ENST00000508274 INSRP06213 1382 aa19.78■□□□□ 0.76
RAB28-205ENST00000508274 CGNL1Q0VF96 1302 aa19.77■□□□□ 0.76
RAB28-205ENST00000508274 TXNRD1Q16881 649 aa19.77■□□□□ 0.76
RAB28-205ENST00000508274 CASZ1Q86V15 1759 aa19.75■□□□□ 0.75
RAB28-205ENST00000508274 KIF24Q5T7B8 1368 aa19.75■□□□□ 0.75
RAB28-205ENST00000508274 ZCRB1Q8TBF4 217 aaKnown RBP19.74■□□□□ 0.75
RAB28-205ENST00000508274 PAPPAQ13219 1627 aa19.73■□□□□ 0.75
RAB28-205ENST00000508274 PPM1GO15355 546 aaPredicted RBP19.73■□□□□ 0.75
RAB28-205ENST00000508274 PDGFDQ9GZP0 370 aaPredicted RBP19.73■□□□□ 0.75
RAB28-205ENST00000508274 PANK3Q9H999 370 aa19.72■□□□□ 0.75
RAB28-205ENST00000508274 RAPGEF4Q8WZA2 1011 aa19.7■□□□□ 0.74
RAB28-205ENST00000508274 TNNT2P45379 298 aaPredicted RBP19.7■□□□□ 0.74
RAB28-205ENST00000508274 NSD2O96028 1365 aa19.69■□□□□ 0.74
RAB28-205ENST00000508274 SYTL4Q96C24 671 aaPredicted RBP19.69■□□□□ 0.74
RAB28-205ENST00000508274 POLKQ9UBT6 870 aa19.69■□□□□ 0.74
RAB28-205ENST00000508274 TATP17735 454 aaPredicted RBP19.68■□□□□ 0.74
RAB28-205ENST00000508274 PRIM1P49642 420 aaKnown RBP19.68■□□□□ 0.74
RAB28-205ENST00000508274 NCAPD2Q15021 1401 aa19.68■□□□□ 0.74
RAB28-205ENST00000508274 PKD1L3Q7Z443 1732 aa19.68■□□□□ 0.74
RAB28-205ENST00000508274 WASHC2AQ641Q2 1341 aa19.68■□□□□ 0.74
RAB28-205ENST00000508274 SLC15A2Q16348 729 aa19.67■□□□□ 0.74
RAB28-205ENST00000508274 SPON1Q9HCB6 807 aa19.67■□□□□ 0.74
RAB28-205ENST00000508274 LRRC4BQ9NT99 713 aa19.67■□□□□ 0.74
RAB28-205ENST00000508274 STK32BQ9NY57 414 aa19.67■□□□□ 0.74
RAB28-205ENST00000508274 LY75O60449 1722 aa19.67■□□□□ 0.74
RAB28-205ENST00000508274 TOGARAM1Q9Y4F4 1720 aa19.66■□□□□ 0.74
RAB28-205ENST00000508274 ZBTB7AO95365 584 aa19.64■□□□□ 0.73
RAB28-205ENST00000508274 EYA1Q99502 592 aa19.64■□□□□ 0.73
RAB28-205ENST00000508274 PCDH11XQ9BZA7 1347 aa19.64■□□□□ 0.73
RAB28-205ENST00000508274 PCDH11YQ9BZA8 1340 aa19.64■□□□□ 0.73
RAB28-205ENST00000508274 KCNQ4P56696 695 aa19.63■□□□□ 0.73
RAB28-205ENST00000508274 ZNF827Q17R98 1081 aa19.63■□□□□ 0.73
RAB28-205ENST00000508274 TUBGCP6Q96RT7 1819 aa19.63■□□□□ 0.73
RAB28-205ENST00000508274 KIF7Q2M1P5 1343 aa19.63■□□□□ 0.73
RAB28-205ENST00000508274 CYP27B1O15528 508 aa19.62■□□□□ 0.73
RAB28-205ENST00000508274 ITGB4P16144 1822 aa19.62■□□□□ 0.73
RAB28-205ENST00000508274 EIF4A2Q14240 407 aaKnown RBP19.61■□□□□ 0.73
RAB28-205ENST00000508274 PPP1R1BQ9UD71 204 aaPredicted RBP19.61■□□□□ 0.73
RAB28-205ENST00000508274 SLC27A3Q5K4L6 730 aa19.59■□□□□ 0.73
RAB28-205ENST00000508274 ATF5Q9Y2D1 282 aaPredicted RBP19.59■□□□□ 0.73
RAB28-205ENST00000508274 QSER1Q2KHR3 1735 aa19.59■□□□□ 0.73
RAB28-205ENST00000508274 PTGER2P43116 358 aa19.57■□□□□ 0.72
RAB28-205ENST00000508274 MORC1Q86VD1 984 aa19.57■□□□□ 0.72
RAB28-205ENST00000508274 AKT1S1Q96B36 256 aa19.57■□□□□ 0.72
RAB28-205ENST00000508274 KNSTRNQ9Y448 316 aa19.57■□□□□ 0.72
RAB28-205ENST00000508274 AMER1Q5JTC6 1135 aaPredicted RBP19.55■□□□□ 0.72
RAB28-205ENST00000508274 MPRIPQ6WCQ1 1025 aa19.55■□□□□ 0.72
RAB28-205ENST00000508274 CCNL1Q9UK58 526 aaPredicted RBP19.55■□□□□ 0.72
RAB28-205ENST00000508274 SPG7Q9UQ90 795 aa19.55■□□□□ 0.72
RAB28-205ENST00000508274 C5P01031 1676 aa19.55■□□□□ 0.72
RAB28-205ENST00000508274 IGSF1Q8N6C5 1336 aa19.54■□□□□ 0.72
RAB28-205ENST00000508274 MTFR1LQ9H019 292 aa19.54■□□□□ 0.72
RAB28-205ENST00000508274 TAF1LQ8IZX4 1826 aa19.54■□□□□ 0.72
RAB28-205ENST00000508274 PNPLA7Q6ZV29 1317 aa19.53■□□□□ 0.72
RAB28-205ENST00000508274 SGIP1Q9BQI5 828 aa19.53■□□□□ 0.72
RAB28-205ENST00000508274 PALLDQ8WX93 1383 aa19.52■□□□□ 0.72
RAB28-205ENST00000508274 NKX1-1Q15270 411 aaPredicted RBP19.52■□□□□ 0.71
RAB28-205ENST00000508274 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.51■□□□□ 0.711e-6■■□□□ 13.8
RAB28-205ENST00000508274 TFCP2L1Q9NZI6 479 aa19.51■□□□□ 0.71
RAB28-205ENST00000508274 PHKG2P15735 406 aa19.5■□□□□ 0.71
RAB28-205ENST00000508274 PIGBQ92521 554 aa19.5■□□□□ 0.71
RAB28-205ENST00000508274 COL24A1Q17RW2 1714 aa19.49■□□□□ 0.71
RAB28-205ENST00000508274 PER1O15534 1290 aaPredicted RBP19.49■□□□□ 0.71
RAB28-205ENST00000508274 AEBP1Q8IUX7 1158 aa19.49■□□□□ 0.71
RAB28-205ENST00000508274 UTRNP46939 3433 aa19.49■□□□□ 0.71
RAB28-205ENST00000508274 IFNL2Q8IZJ0 200 aa19.49■□□□□ 0.71
RAB28-205ENST00000508274 CC2D1BQ5T0F9 858 aaKnown RBP19.47■□□□□ 0.71
RAB28-205ENST00000508274 FHDC1Q9C0D6 1143 aaPredicted RBP19.47■□□□□ 0.71
RAB28-205ENST00000508274 C4BP0C0L5 1744 aa19.46■□□□□ 0.71
RAB28-205ENST00000508274 PLEKHG2Q9H7P9 1386 aa19.46■□□□□ 0.71
RAB28-205ENST00000508274 IL13P35225 146 aa19.45■□□□□ 0.7
RAB28-205ENST00000508274 TMOD3Q9NYL9 352 aa19.45■□□□□ 0.7
RAB28-205ENST00000508274 ARXQ96QS3 562 aa19.44■□□□□ 0.7
RAB28-205ENST00000508274 MTHFSP49914 203 aa19.44■□□□□ 0.7
RAB28-205ENST00000508274 CNGB1Q14028 1251 aaPredicted RBP19.44■□□□□ 0.7
RAB28-205ENST00000508274 SULT6B1Q6IMI4 303 aa19.44■□□□□ 0.7
RAB28-205ENST00000508274 COL23A1Q86Y22 540 aaPredicted RBP19.44■□□□□ 0.7
RAB28-205ENST00000508274 SLC16A10Q8TF71 515 aa19.44■□□□□ 0.7
RAB28-205ENST00000508274 SMARCC1Q92922 1105 aaPredicted RBP19.44■□□□□ 0.7
RAB28-205ENST00000508274 SYT17Q9BSW7 474 aa19.44■□□□□ 0.7
RAB28-205ENST00000508274 ASAP1Q9ULH1 1129 aa19.44■□□□□ 0.7
RAB28-205ENST00000508274 GOLGB1Q14789 3259 aaKnown RBP19.44■□□□□ 0.7
RAB28-205ENST00000508274 UBR3Q6ZT12 1888 aa19.43■□□□□ 0.7
RAB28-205ENST00000508274 KDRP35968 1356 aa19.43■□□□□ 0.7
RAB28-205ENST00000508274 KDM6AO15550 1401 aaPredicted RBP19.43■□□□□ 0.7
RAB28-205ENST00000508274 PLEKHO1Q53GL0 409 aaPredicted RBP19.42■□□□□ 0.7
RAB28-205ENST00000508274 ZNF530Q6P9A1 599 aaPredicted RBP19.42■□□□□ 0.7
RAB28-205ENST00000508274 AMIGO3Q86WK7 504 aa19.41■□□□□ 0.7
RAB28-205ENST00000508274 LOC102724428A0A0B4J2F2 783 aa19.4■□□□□ 0.7
RAB28-205ENST00000508274 SIK1P57059 783 aa19.4■□□□□ 0.7
RAB28-205ENST00000508274 AMOTQ4VCS5 1084 aa19.4■□□□□ 0.7
RAB28-205ENST00000508274 SMIM5Q71RC9 77 aa19.4■□□□□ 0.7
RAB28-205ENST00000508274 ATG3Q9NT62 314 aa19.4■□□□□ 0.7
RAB28-205ENST00000508274 MSL1Q68DK7 614 aa19.39■□□□□ 0.69
RAB28-205ENST00000508274 LINC00116Q8NCU8 138 aa19.39■□□□□ 0.69
RAB28-205ENST00000508274 DCAF5Q96JK2 942 aa19.39■□□□□ 0.69
RAB28-205ENST00000508274 NPC1L1Q9UHC9 1359 aa19.38■□□□□ 0.69
RAB28-205ENST00000508274 POLD1P28340 1107 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms