RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 INSM2Q96T92 566 aaPredicted RBP3.34□□□□□ -1.87
SMN2-208ENST00000508258 OCSTAMPQ9BR26 566 aa3.34□□□□□ -1.87
SMN2-208ENST00000508258 ESF1Q9H501 851 aaKnown RBP3.34□□□□□ -1.87
SMN2-208ENST00000508258 ZNF395Q9H8N7 513 aaPredicted RBP3.34□□□□□ -1.87
SMN2-208ENST00000508258 CYLDQ9NQC7 956 aa3.34□□□□□ -1.87
SMN2-208ENST00000508258 DNMT3LQ9UJW3 386 aa3.34□□□□□ -1.87
SMN2-208ENST00000508258 FBXO45P0C2W1 286 aa3.33□□□□□ -1.88
SMN2-208ENST00000508258 GMPRP36959 345 aa3.33□□□□□ -1.88
SMN2-208ENST00000508258 CFAP70Q5T0N1 1121 aa3.33□□□□□ -1.88
SMN2-208ENST00000508258 Q6ZVU0 165 aa3.33□□□□□ -1.88
SMN2-208ENST00000508258 NPAS3Q8IXF0 933 aa3.33□□□□□ -1.88
SMN2-208ENST00000508258 TRIM52Q96A61 297 aa3.33□□□□□ -1.88
SMN2-208ENST00000508258 ALG2Q9H553 416 aa3.33□□□□□ -1.88
SMN2-208ENST00000508258 SOS2Q07890 1332 aaPredicted RBP3.33□□□□□ -1.88
SMN2-208ENST00000508258 MEN1O00255 615 aa3.32□□□□□ -1.88
SMN2-208ENST00000508258 SPINT1O43278 529 aa3.32□□□□□ -1.88
SMN2-208ENST00000508258 WIPF1O43516 503 aa3.32□□□□□ -1.88
SMN2-208ENST00000508258 PPFIA3O75145 1194 aa3.32□□□□□ -1.88
SMN2-208ENST00000508258 GIGYF1O75420 1035 aaPredicted RBP3.32□□□□□ -1.88
SMN2-208ENST00000508258 CTSOP43234 321 aaPredicted RBP3.32□□□□□ -1.88
SMN2-208ENST00000508258 LCE2CQ5TA81 110 aa3.32□□□□□ -1.88
SMN2-208ENST00000508258 PBXIP1Q96AQ6 731 aa3.32□□□□□ -1.88
SMN2-208ENST00000508258 ERBB4Q15303 1308 aa3.32□□□□□ -1.88
SMN2-208ENST00000508258 ACIN1Q9UKV3 1341 aaKnown RBP3.32□□□□□ -1.88
SMN2-208ENST00000508258 CDC14CA4D256 554 aa3.31□□□□□ -1.88
SMN2-208ENST00000508258 FAM181BA6NEQ2 426 aa3.31□□□□□ -1.88
SMN2-208ENST00000508258 ATP5J2-PTCD1G3V325 749 aa3.31□□□□□ -1.88
SMN2-208ENST00000508258 ADH1AP07327 375 aa3.31□□□□□ -1.88
SMN2-208ENST00000508258 SOX11P35716 441 aa3.31□□□□□ -1.88
SMN2-208ENST00000508258 PTSQ03393 145 aa3.31□□□□□ -1.88
SMN2-208ENST00000508258 VAC14Q08AM6 782 aa3.31□□□□□ -1.88
SMN2-208ENST00000508258 NR1H3Q13133 447 aa3.31□□□□□ -1.88
SMN2-208ENST00000508258 RNF20Q5VTR2 975 aa3.31□□□□□ -1.88
SMN2-208ENST00000508258 SEPT12Q8IYM1 358 aa3.31□□□□□ -1.88
SMN2-208ENST00000508258 ZSCAN1Q8NBB4 408 aa3.31□□□□□ -1.88
SMN2-208ENST00000508258 ZNF592Q92610 1267 aa3.31□□□□□ -1.88
SMN2-208ENST00000508258 PPP1R12CQ9BZL4 782 aa3.31□□□□□ -1.88
SMN2-208ENST00000508258 STK17AQ9UEE5 414 aa3.31□□□□□ -1.88
SMN2-208ENST00000508258 CCDC9Q9Y3X0 531 aaKnown RBP3.31□□□□□ -1.88
SMN2-208ENST00000508258 PCDHB11Q9Y5F2 797 aa3.31□□□□□ -1.88
SMN2-208ENST00000508258 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.3□□□□□ -1.88
SMN2-208ENST00000508258 ESPNB1AK53 854 aa3.3□□□□□ -1.88
SMN2-208ENST00000508258 ADD1P35611 737 aaKnown RBP3.3□□□□□ -1.88
SMN2-208ENST00000508258 PTGIRP43119 386 aa3.3□□□□□ -1.88
SMN2-208ENST00000508258 PDE4CQ08493 712 aa3.3□□□□□ -1.88
SMN2-208ENST00000508258 PRICKLE2Q7Z3G6 844 aa3.3□□□□□ -1.88
SMN2-208ENST00000508258 CCDC155Q8N6L0 562 aa3.3□□□□□ -1.88
SMN2-208ENST00000508258 RNF217Q8TC41 542 aa3.3□□□□□ -1.88
SMN2-208ENST00000508258 UCN2Q96RP3 112 aa3.3□□□□□ -1.88
SMN2-208ENST00000508258 PALM3A6NDB9 673 aaPredicted RBP3.29□□□□□ -1.88
SMN2-208ENST00000508258 LILRA1O75019 489 aa3.29□□□□□ -1.88
SMN2-208ENST00000508258 RHOQP17081 205 aa3.29□□□□□ -1.88
SMN2-208ENST00000508258 MCCD1P59942 119 aaPredicted RBP3.29□□□□□ -1.88
SMN2-208ENST00000508258 SLC27A3Q5K4L6 730 aa3.29□□□□□ -1.88
SMN2-208ENST00000508258 CC2D2BQ6DHV5 1058 aa3.29□□□□□ -1.88
SMN2-208ENST00000508258 LYSMD3Q7Z3D4 306 aa3.29□□□□□ -1.88
SMN2-208ENST00000508258 AEBP1Q8IUX7 1158 aa3.29□□□□□ -1.88
SMN2-208ENST00000508258 NLRP3Q96P20 1036 aa3.29□□□□□ -1.88
SMN2-208ENST00000508258 USTQ9Y2C2 406 aa3.29□□□□□ -1.88
SMN2-208ENST00000508258 ATG7O95352 703 aa3.28□□□□□ -1.88
SMN2-208ENST00000508258 MYCP01106 439 aaPredicted RBP3.28□□□□□ -1.88
SMN2-208ENST00000508258 RFX1P22670 979 aa3.28□□□□□ -1.88
SMN2-208ENST00000508258 SCTRP47872 440 aa3.28□□□□□ -1.88
SMN2-208ENST00000508258 EIF4G2P78344 907 aaKnown RBP eCLIP3.28□□□□□ -1.88
SMN2-208ENST00000508258 RIPOR1Q6ZS17 1223 aa3.28□□□□□ -1.88
SMN2-208ENST00000508258 CYP2U1Q7Z449 544 aa3.28□□□□□ -1.88
SMN2-208ENST00000508258 NPM2Q86SE8 214 aaKnown RBP3.28□□□□□ -1.88
SMN2-208ENST00000508258 VWA5B2Q8N398 1253 aa3.28□□□□□ -1.88
SMN2-208ENST00000508258 CNTNAP3BQ96NU0 1288 aa3.28□□□□□ -1.88
SMN2-208ENST00000508258 CNTNAP3Q9BZ76 1288 aa3.28□□□□□ -1.88
SMN2-208ENST00000508258 ARHGEF10LQ9HCE6 1279 aa3.28□□□□□ -1.88
SMN2-208ENST00000508258 TFIP11Q9UBB9 837 aaKnown RBP3.28□□□□□ -1.88
SMN2-208ENST00000508258 MAFBQ9Y5Q3 323 aaPredicted RBP3.28□□□□□ -1.88
SMN2-208ENST00000508258 A0A1W2PRU2 124 aa3.27□□□□□ -1.89
SMN2-208ENST00000508258 BRD1O95696 1058 aa3.27□□□□□ -1.89
SMN2-208ENST00000508258 VSIG8P0DPA2 414 aa3.27□□□□□ -1.89
SMN2-208ENST00000508258 ITGA6P23229 1130 aa3.27□□□□□ -1.89
SMN2-208ENST00000508258 LMOD1P29536 600 aaPredicted RBP3.27□□□□□ -1.89
SMN2-208ENST00000508258 ERVK-9P63128 1117 aa3.27□□□□□ -1.89
SMN2-208ENST00000508258 SEMA3FQ13275 785 aa3.27□□□□□ -1.89
SMN2-208ENST00000508258 SLFNL1Q499Z3 407 aa3.27□□□□□ -1.89
SMN2-208ENST00000508258 FOXD4L5Q5VV16 416 aaPredicted RBP3.27□□□□□ -1.89
SMN2-208ENST00000508258 SV2AQ7L0J3 742 aa3.27□□□□□ -1.89
SMN2-208ENST00000508258 CCDC125Q86Z20 511 aa3.27□□□□□ -1.89
SMN2-208ENST00000508258 RAB6BQ9NRW1 208 aa3.27□□□□□ -1.89
SMN2-208ENST00000508258 CEP126Q9P2H0 1117 aa3.27□□□□□ -1.89
SMN2-208ENST00000508258 SLC35F4A4IF30 521 aa3.26□□□□□ -1.89
SMN2-208ENST00000508258 TMEM88BA6NKF7 163 aa3.26□□□□□ -1.89
SMN2-208ENST00000508258 PATL2C9JE40 543 aaKnown RBP3.26□□□□□ -1.89
SMN2-208ENST00000508258 ATP9BO43861 1147 aa3.26□□□□□ -1.89
SMN2-208ENST00000508258 CSB-PGBD3P0DP91 1061 aa3.26□□□□□ -1.89
SMN2-208ENST00000508258 GTF2E1P29083 439 aaPredicted RBP3.26□□□□□ -1.89
SMN2-208ENST00000508258 KCNA1Q09470 495 aa3.26□□□□□ -1.89
SMN2-208ENST00000508258 OXLD1Q5BKU9 147 aa3.26□□□□□ -1.89
SMN2-208ENST00000508258 KANK4Q5T7N3 995 aaPredicted RBP3.26□□□□□ -1.89
SMN2-208ENST00000508258 TBC1D9Q6ZT07 1266 aa3.26□□□□□ -1.89
SMN2-208ENST00000508258 RNF135Q8IUD6 432 aa3.26□□□□□ -1.89
SMN2-208ENST00000508258 GPR161Q8N6U8 529 aaKnown RBP3.26□□□□□ -1.89
SMN2-208ENST00000508258 KDF1Q8NAX2 398 aaPredicted RBP3.26□□□□□ -1.89
SMN2-208ENST00000508258 NFATC2IPQ8NCF5 419 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms