RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 GYS2P54840 703 aa12.94□□□□□ -0.34
PDLIM5-210ENST00000508216 TEX35Q5T0J7 233 aa12.94□□□□□ -0.34
PDLIM5-210ENST00000508216 RBSNQ9H1K0 784 aa12.94□□□□□ -0.34
PDLIM5-210ENST00000508216 TMX1Q9H3N1 280 aa12.94□□□□□ -0.34
PDLIM5-210ENST00000508216 KDM4CQ9H3R0 1056 aa12.94□□□□□ -0.34
PDLIM5-210ENST00000508216 SPAG9O60271 1321 aaKnown RBP12.93□□□□□ -0.34
PDLIM5-210ENST00000508216 TIE1P35590 1138 aa12.93□□□□□ -0.34
PDLIM5-210ENST00000508216 TRAF1Q13077 416 aa12.93□□□□□ -0.34
PDLIM5-210ENST00000508216 C10orf67Q8IYJ2 551 aa12.93□□□□□ -0.34
PDLIM5-210ENST00000508216 PPM1EQ8WY54 764 aa12.93□□□□□ -0.34
PDLIM5-210ENST00000508216 PSD3Q9NYI0 1048 aa12.93□□□□□ -0.34
PDLIM5-210ENST00000508216 BRD4O60885 1362 aaPredicted RBP12.93□□□□□ -0.34
PDLIM5-210ENST00000508216 POLA1P09884 1462 aaPredicted RBP12.93□□□□□ -0.34
PDLIM5-210ENST00000508216 CGNL1Q0VF96 1302 aa12.93□□□□□ -0.34
PDLIM5-210ENST00000508216 SETSIPP0DME0 302 aa12.92□□□□□ -0.34
PDLIM5-210ENST00000508216 SCP2P22307 547 aa12.92□□□□□ -0.34
PDLIM5-210ENST00000508216 ICA1Q05084 483 aa12.92□□□□□ -0.34
PDLIM5-210ENST00000508216 GOLGA5Q8TBA6 731 aa12.92□□□□□ -0.34
PDLIM5-210ENST00000508216 SMTNL1A8MU46 457 aa12.92□□□□□ -0.34
PDLIM5-210ENST00000508216 CCT2P78371 535 aaKnown RBP12.92□□□□□ -0.34
PDLIM5-210ENST00000508216 RNF20Q5VTR2 975 aa12.92□□□□□ -0.34
PDLIM5-210ENST00000508216 CCDC30Q5VVM6 783 aa12.92□□□□□ -0.34
PDLIM5-210ENST00000508216 LARP6Q9BRS8 491 aaKnown RBP12.92□□□□□ -0.34
PDLIM5-210ENST00000508216 PLEKHH1Q9ULM0 1364 aa12.92□□□□□ -0.34
PDLIM5-210ENST00000508216 CT47B1P0C2W7 299 aaPredicted RBP12.91□□□□□ -0.34
PDLIM5-210ENST00000508216 EIF4G2P78344 907 aaKnown RBP eCLIP12.91□□□□□ -0.34
PDLIM5-210ENST00000508216 GPS2Q13227 327 aa12.91□□□□□ -0.34
PDLIM5-210ENST00000508216 C20orf194Q5TEA3 1177 aa12.91□□□□□ -0.34
PDLIM5-210ENST00000508216 PACS2Q86VP3 889 aa12.91□□□□□ -0.34
PDLIM5-210ENST00000508216 FMNL3Q8IVF7 1028 aa12.91□□□□□ -0.34
PDLIM5-210ENST00000508216 FBXO18Q8NFZ0 1043 aa12.91□□□□□ -0.34
PDLIM5-210ENST00000508216 FAXDC2Q96IV6 333 aa12.91□□□□□ -0.34
PDLIM5-210ENST00000508216 RRP15Q9Y3B9 282 aaKnown RBP12.91□□□□□ -0.34
PDLIM5-210ENST00000508216 STK24Q9Y6E0 443 aa12.91□□□□□ -0.34
PDLIM5-210ENST00000508216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.9□□□□□ -0.34
PDLIM5-210ENST00000508216 PPFIA2O75334 1257 aa12.9□□□□□ -0.34
PDLIM5-210ENST00000508216 ZSCAN23Q3MJ62 389 aa12.9□□□□□ -0.34
PDLIM5-210ENST00000508216 SKAP1Q86WV1 359 aa12.9□□□□□ -0.34
PDLIM5-210ENST00000508216 IL16Q14005 1332 aa12.9□□□□□ -0.34
PDLIM5-210ENST00000508216 CCP110O43303 1012 aa12.89□□□□□ -0.35
PDLIM5-210ENST00000508216 RWDD2BP57060 319 aa12.89□□□□□ -0.35
PDLIM5-210ENST00000508216 LRSAM1Q6UWE0 723 aa12.89□□□□□ -0.35
PDLIM5-210ENST00000508216 MORC1Q86VD1 984 aa12.89□□□□□ -0.35
PDLIM5-210ENST00000508216 GPT2Q8TD30 523 aa12.89□□□□□ -0.35
PDLIM5-210ENST00000508216 TRERF1Q96PN7 1200 aa12.89□□□□□ -0.35
PDLIM5-210ENST00000508216 TMEM106CQ9BVX2 250 aa12.89□□□□□ -0.35
PDLIM5-210ENST00000508216 SHROOM2Q13796 1616 aa12.89□□□□□ -0.35
PDLIM5-210ENST00000508216 TRIM66O15016 1216 aa12.89□□□□□ -0.35
PDLIM5-210ENST00000508216 BMS1Q14692 1282 aaKnown RBP12.89□□□□□ -0.35
PDLIM5-210ENST00000508216 PDCD2Q16342 344 aaPredicted RBP12.89□□□□□ -0.35
PDLIM5-210ENST00000508216 HSCBQ8IWL3 235 aa12.89□□□□□ -0.35
PDLIM5-210ENST00000508216 CCDC97Q96F63 343 aaPredicted RBP12.89□□□□□ -0.35
PDLIM5-210ENST00000508216 TPM1P09493 284 aa12.88□□□□□ -0.35
PDLIM5-210ENST00000508216 ABCD1P33897 745 aa12.88□□□□□ -0.35
PDLIM5-210ENST00000508216 SART3Q15020 963 aaKnown RBP12.88□□□□□ -0.35
PDLIM5-210ENST00000508216 SPTY2D1Q68D10 685 aaPredicted RBP12.88□□□□□ -0.35
PDLIM5-210ENST00000508216 WWC2Q6AWC2 1192 aa12.88□□□□□ -0.35
PDLIM5-210ENST00000508216 TMX4Q9H1E5 349 aaPredicted RBP12.88□□□□□ -0.35
PDLIM5-210ENST00000508216 SMC2O95347 1197 aa12.87□□□□□ -0.35
PDLIM5-210ENST00000508216 SEC24BO95487 1268 aa12.87□□□□□ -0.35
PDLIM5-210ENST00000508216 IVLP07476 585 aa12.87□□□□□ -0.35
PDLIM5-210ENST00000508216 USP8P40818 1118 aa12.87□□□□□ -0.35
PDLIM5-210ENST00000508216 TPM4P67936 248 aa12.87□□□□□ -0.35
PDLIM5-210ENST00000508216 AP1ARQ63HQ0 302 aa12.87□□□□□ -0.35
PDLIM5-210ENST00000508216 KIAA1524Q8TCG1 905 aa12.87□□□□□ -0.35
PDLIM5-210ENST00000508216 MIEF2Q96C03 454 aa12.87□□□□□ -0.35
PDLIM5-210ENST00000508216 SH3GL3Q99963 347 aa12.87□□□□□ -0.35
PDLIM5-210ENST00000508216 MMTAG2Q9BU76 263 aaKnown RBP12.87□□□□□ -0.35
PDLIM5-210ENST00000508216 RANBP17Q9H2T7 1088 aaKnown RBP12.87□□□□□ -0.35
PDLIM5-210ENST00000508216 BMP2KQ9NSY1 1161 aaPredicted RBP12.87□□□□□ -0.35
PDLIM5-210ENST00000508216 TRAK1Q9UPV9 953 aa12.87□□□□□ -0.35
PDLIM5-210ENST00000508216 TTLL13PA6NNM8 815 aa12.86□□□□□ -0.35
PDLIM5-210ENST00000508216 RPS6KA5O75582 802 aa12.86□□□□□ -0.35
PDLIM5-210ENST00000508216 TNNT1P13805 278 aa12.86□□□□□ -0.35
PDLIM5-210ENST00000508216 AMOTQ4VCS5 1084 aa12.86□□□□□ -0.35
PDLIM5-210ENST00000508216 HDGFL1Q5TGJ6 251 aa12.86□□□□□ -0.35
PDLIM5-210ENST00000508216 FAM177A1Q8N128 213 aaPredicted RBP12.86□□□□□ -0.35
PDLIM5-210ENST00000508216 CCDC26Q8TAB7 109 aa12.86□□□□□ -0.35
PDLIM5-210ENST00000508216 CEP126Q9P2H0 1117 aa12.86□□□□□ -0.35
PDLIM5-210ENST00000508216 TBC1D2BQ9UPU7 963 aa12.86□□□□□ -0.35
PDLIM5-210ENST00000508216 KINO60870 393 aaKnown RBP12.86□□□□□ -0.35
PDLIM5-210ENST00000508216 RBM6P78332 1123 aaKnown RBP12.86□□□□□ -0.35
PDLIM5-210ENST00000508216 CAVIN1Q6NZI2 390 aaKnown RBP12.86□□□□□ -0.35
PDLIM5-210ENST00000508216 EFCAB13Q8IY85 973 aa12.86□□□□□ -0.35
PDLIM5-210ENST00000508216 CCDC191Q8NCU4 936 aa12.86□□□□□ -0.35
PDLIM5-210ENST00000508216 SNRNP27Q8WVK2 155 aaKnown RBP12.86□□□□□ -0.35
PDLIM5-210ENST00000508216 PHF8Q9UPP1 1060 aa12.86□□□□□ -0.35
PDLIM5-210ENST00000508216 ATP8B1O43520 1251 aa12.85□□□□□ -0.35
PDLIM5-210ENST00000508216 POLD1P28340 1107 aa12.85□□□□□ -0.35
PDLIM5-210ENST00000508216 GRIK3Q13003 919 aa12.85□□□□□ -0.35
PDLIM5-210ENST00000508216 SLC5A9Q2M3M2 681 aa12.85□□□□□ -0.35
PDLIM5-210ENST00000508216 KRBA2Q6ZNG9 492 aa12.85□□□□□ -0.35
PDLIM5-210ENST00000508216 PTPRCP08575 1304 aa12.85□□□□□ -0.35
PDLIM5-210ENST00000508216 SPATA31E1Q6ZUB1 1445 aa12.85□□□□□ -0.35
PDLIM5-210ENST00000508216 GOLGA6CA6NDK9 693 aa12.84□□□□□ -0.35
PDLIM5-210ENST00000508216 GOLGA6BA6NDN3 693 aa12.84□□□□□ -0.35
PDLIM5-210ENST00000508216 FAM163BP0C2L3 166 aa12.84□□□□□ -0.35
PDLIM5-210ENST00000508216 GOLGA6DP0CG33 693 aa12.84□□□□□ -0.35
PDLIM5-210ENST00000508216 GOLGA6AQ9NYA3 693 aa12.84□□□□□ -0.35
PDLIM5-210ENST00000508216 SCAF11Q99590 1463 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms