RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 RGPD1P0DJD0 1748 aa14.32□□□□□ -0.12
PROM1-207ENST00000508167 AMOTQ4VCS5 1084 aa14.31□□□□□ -0.12
PROM1-207ENST00000508167 RCAN3Q9UKA8 241 aa14.31□□□□□ -0.12
PROM1-207ENST00000508167 ZCRB1Q8TBF4 217 aaKnown RBP14.31□□□□□ -0.12
PROM1-207ENST00000508167 PEAK1Q9H792 1746 aa14.31□□□□□ -0.12
PROM1-207ENST00000508167 SLFN5Q08AF3 891 aa14.31□□□□□ -0.12
PROM1-207ENST00000508167 LMOD3Q0VAK6 560 aa14.31□□□□□ -0.12
PROM1-207ENST00000508167 CAMTA1Q9Y6Y1 1673 aa14.31□□□□□ -0.12
PROM1-207ENST00000508167 DDB1Q16531 1140 aa14.31□□□□□ -0.12
PROM1-207ENST00000508167 SYTL4Q96C24 671 aaPredicted RBP14.31□□□□□ -0.12
PROM1-207ENST00000508167 TMPOP42166 694 aaKnown RBP14.3□□□□□ -0.12
PROM1-207ENST00000508167 FNBP4Q8N3X1 1017 aaPredicted RBP14.3□□□□□ -0.12
PROM1-207ENST00000508167 NFE2L2Q16236 605 aa14.3□□□□□ -0.12
PROM1-207ENST00000508167 RBM19Q9Y4C8 960 aaKnown RBP14.3□□□□□ -0.12
PROM1-207ENST00000508167 CRB1P82279 1406 aa14.3□□□□□ -0.12
PROM1-207ENST00000508167 DLG5Q8TDM6 1919 aa14.3□□□□□ -0.12
PROM1-207ENST00000508167 MTHFSDQ2M296 383 aaKnown RBP14.3□□□□□ -0.12
PROM1-207ENST00000508167 PHRF1Q9P1Y6 1649 aaKnown RBP14.29□□□□□ -0.12
PROM1-207ENST00000508167 COL5A2P05997 1499 aaPredicted RBP14.29□□□□□ -0.12
PROM1-207ENST00000508167 LTN1O94822 1766 aa14.29□□□□□ -0.12
PROM1-207ENST00000508167 VPS72Q15906 364 aa14.29□□□□□ -0.12
PROM1-207ENST00000508167 TEFQ10587 303 aa14.29□□□□□ -0.12
PROM1-207ENST00000508167 GJD4Q96KN9 370 aaPredicted RBP14.29□□□□□ -0.12
PROM1-207ENST00000508167 DCTN1Q14203 1278 aa14.28□□□□□ -0.12
PROM1-207ENST00000508167 MPRIPQ6WCQ1 1025 aa14.28□□□□□ -0.12
PROM1-207ENST00000508167 LRP6O75581 1613 aa14.28□□□□□ -0.12
PROM1-207ENST00000508167 GNAT3A8MTJ3 354 aa14.27□□□□□ -0.12
PROM1-207ENST00000508167 CDCA7Q9BWT1 371 aaPredicted RBP14.27□□□□□ -0.12
PROM1-207ENST00000508167 SPATA31A1Q5TZJ5 1347 aa14.27□□□□□ -0.12
PROM1-207ENST00000508167 C20orf194Q5TEA3 1177 aa14.27□□□□□ -0.12
PROM1-207ENST00000508167 IFNL2Q8IZJ0 200 aa14.27□□□□□ -0.12
PROM1-207ENST00000508167 PLEKHF1Q96S99 279 aa14.27□□□□□ -0.12
PROM1-207ENST00000508167 THUMPD2Q9BTF0 503 aaKnown RBP14.27□□□□□ -0.12
PROM1-207ENST00000508167 MCM10Q7L590 875 aa14.27□□□□□ -0.13
PROM1-207ENST00000508167 EXOC6Q8TAG9 804 aa14.27□□□□□ -0.13
PROM1-207ENST00000508167 SPATA31A5Q5VU36 1347 aa14.27□□□□□ -0.13
PROM1-207ENST00000508167 SPATA31A7Q8IWB4 1347 aa14.27□□□□□ -0.13
PROM1-207ENST00000508167 KAT6BQ8WYB5 2073 aa14.26□□□□□ -0.13
PROM1-207ENST00000508167 RXRBP28702 533 aa14.26□□□□□ -0.13
PROM1-207ENST00000508167 CALD1Q05682 793 aaKnown RBP14.26□□□□□ -0.13
PROM1-207ENST00000508167 THRAP3Q9Y2W1 955 aaKnown RBP14.26□□□□□ -0.13
PROM1-207ENST00000508167 VIRMAQ69YN4 1812 aaKnown RBP14.25□□□□□ -0.13
PROM1-207ENST00000508167 HSP90AB1P08238 724 aaKnown RBP14.25□□□□□ -0.13
PROM1-207ENST00000508167 GOLGA2Q08379 1002 aa14.24□□□□□ -0.13
PROM1-207ENST00000508167 RBM6P78332 1123 aaKnown RBP14.24□□□□□ -0.13
PROM1-207ENST00000508167 PCDH11XQ9BZA7 1347 aa14.23□□□□□ -0.13
PROM1-207ENST00000508167 PCDH11YQ9BZA8 1340 aa14.23□□□□□ -0.13
PROM1-207ENST00000508167 COL14A1Q05707 1796 aaKnown RBP14.23□□□□□ -0.13
PROM1-207ENST00000508167 COL22A1Q8NFW1 1626 aaPredicted RBP14.23□□□□□ -0.13
PROM1-207ENST00000508167 AKAP4Q5JQC9 854 aa14.23□□□□□ -0.13
PROM1-207ENST00000508167 SEPT12Q8IYM1 358 aa14.23□□□□□ -0.13
PROM1-207ENST00000508167 PLIN1O60240 522 aa14.23□□□□□ -0.13
PROM1-207ENST00000508167 NGEFQ8N5V2 710 aa14.23□□□□□ -0.13
PROM1-207ENST00000508167 CABP4P57796 275 aa14.23□□□□□ -0.13
PROM1-207ENST00000508167 NCBP3Q53F19 620 aaKnown RBP14.22□□□□□ -0.13
PROM1-207ENST00000508167 WWC1Q8IX03 1113 aa14.22□□□□□ -0.13
PROM1-207ENST00000508167 KDM2BQ8NHM5 1336 aa14.22□□□□□ -0.13
PROM1-207ENST00000508167 MSH5O43196 834 aa14.22□□□□□ -0.13
PROM1-207ENST00000508167 SLIT2O94813 1529 aa14.22□□□□□ -0.13
PROM1-207ENST00000508167 KDRP35968 1356 aa14.22□□□□□ -0.13
PROM1-207ENST00000508167 FAM182BQ5T319 152 aa14.22□□□□□ -0.13
PROM1-207ENST00000508167 ACSBG1Q96GR2 724 aa14.21□□□□□ -0.13
PROM1-207ENST00000508167 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.21□□□□□ -0.13
PROM1-207ENST00000508167 BCL9LQ86UU0 1499 aa14.21□□□□□ -0.13
PROM1-207ENST00000508167 MAP3K5Q99683 1374 aa14.2□□□□□ -0.14
PROM1-207ENST00000508167 CCDC27Q2M243 656 aa14.2□□□□□ -0.14
PROM1-207ENST00000508167 BARGINQ6ZT62 677 aa14.2□□□□□ -0.14
PROM1-207ENST00000508167 MYH16Q9H6N6 1097 aa14.2□□□□□ -0.14
PROM1-207ENST00000508167 RGPD5Q99666 1765 aa14.2□□□□□ -0.14
PROM1-207ENST00000508167 PHKG2P15735 406 aa14.2□□□□□ -0.14
PROM1-207ENST00000508167 MIS18AQ9NYP9 233 aa14.2□□□□□ -0.14
PROM1-207ENST00000508167 TSPYL4Q9UJ04 414 aa14.2□□□□□ -0.14
PROM1-207ENST00000508167 LGR6Q9HBX8 967 aa14.19□□□□□ -0.14
PROM1-207ENST00000508167 CYP27B1O15528 508 aa14.19□□□□□ -0.14
PROM1-207ENST00000508167 TTC5Q8N0Z6 440 aa14.19□□□□□ -0.14
PROM1-207ENST00000508167 DCAF5Q96JK2 942 aa14.19□□□□□ -0.14
PROM1-207ENST00000508167 ABCA3Q99758 1704 aa14.19□□□□□ -0.14
PROM1-207ENST00000508167 MEGF6O75095 1541 aa14.18□□□□□ -0.14
PROM1-207ENST00000508167 ELL2O00472 640 aaPredicted RBP14.18□□□□□ -0.14
PROM1-207ENST00000508167 TMOD3Q9NYL9 352 aa14.18□□□□□ -0.14
PROM1-207ENST00000508167 GNAI1P63096 354 aa14.18□□□□□ -0.14
PROM1-207ENST00000508167 ABCC6O95255 1503 aa14.18□□□□□ -0.14
PROM1-207ENST00000508167 RNMTO43148 476 aaKnown RBP14.17□□□□□ -0.14
PROM1-207ENST00000508167 CRBNQ96SW2 442 aa14.17□□□□□ -0.14
PROM1-207ENST00000508167 NFATC2IPQ8NCF5 419 aa14.17□□□□□ -0.14
PROM1-207ENST00000508167 TRIM35Q9UPQ4 493 aa14.17□□□□□ -0.14
PROM1-207ENST00000508167 BTBD11A6QL63 1104 aa14.17□□□□□ -0.14
PROM1-207ENST00000508167 E9PSI1 815 aa14.17□□□□□ -0.14
PROM1-207ENST00000508167 KRT27Q7Z3Y8 459 aa14.17□□□□□ -0.14
PROM1-207ENST00000508167 TSR2Q969E8 191 aaKnown RBP14.17□□□□□ -0.14
PROM1-207ENST00000508167 HTATSF1O43719 755 aaKnown RBP14.16□□□□□ -0.14
PROM1-207ENST00000508167 POTEAQ6S8J7 498 aa14.16□□□□□ -0.14
PROM1-207ENST00000508167 WDR63Q8IWG1 891 aa14.16□□□□□ -0.14
PROM1-207ENST00000508167 TAF7Q15545 349 aaPredicted RBP14.16□□□□□ -0.14
PROM1-207ENST00000508167 IL17REQ8NFR9 667 aa14.16□□□□□ -0.14
PROM1-207ENST00000508167 CRYBG1Q9Y4K1 1723 aa14.16□□□□□ -0.14
PROM1-207ENST00000508167 FANCIQ9NVI1 1328 aa14.16□□□□□ -0.14
PROM1-207ENST00000508167 PRIM1P49642 420 aaKnown RBP14.15□□□□□ -0.14
PROM1-207ENST00000508167 COL18A1P39060 1754 aa14.15□□□□□ -0.14
PROM1-207ENST00000508167 RBM42Q9BTD8 480 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms