RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 ANKRD24Q8TF21 1146 aa21.34■■□□□ 1.01
DDX41-207ENST00000507900 SSH1Q8WYL5 1049 aa21.34■■□□□ 1.01
DDX41-207ENST00000507900 ERBB3P21860 1342 aa21.34■■□□□ 1.01
DDX41-207ENST00000507900 RTF1Q92541 710 aaKnown RBP21.33■■□□□ 1.01
DDX41-207ENST00000507900 BCL2L13Q9BXK5 485 aa21.33■■□□□ 1.01
DDX41-207ENST00000507900 SMC4Q9NTJ3 1288 aa21.33■■□□□ 1.01
DDX41-207ENST00000507900 AXIN2Q9Y2T1 843 aa21.33■■□□□ 1.01
DDX41-207ENST00000507900 USHBP1Q8N6Y0 703 aa21.32■■□□□ 1
DDX41-207ENST00000507900 KIF16BQ96L93 1317 aa21.32■■□□□ 1
DDX41-207ENST00000507900 KIAA0232Q92628 1395 aa21.32■■□□□ 1
DDX41-207ENST00000507900 GNAT3A8MTJ3 354 aa21.31■■□□□ 1
DDX41-207ENST00000507900 VAMP4O75379 141 aa21.31■■□□□ 1
DDX41-207ENST00000507900 ZC3H6P61129 1189 aaKnown RBP21.31■■□□□ 1
DDX41-207ENST00000507900 ZKSCAN2Q63HK3 967 aa21.31■■□□□ 1
DDX41-207ENST00000507900 FRAT1Q92837 279 aaPredicted RBP21.31■■□□□ 1
DDX41-207ENST00000507900 PLEKHG2Q9H7P9 1386 aa21.31■■□□□ 1
DDX41-207ENST00000507900 MS4A1P11836 297 aa21.31■■□□□ 1
DDX41-207ENST00000507900 LRRC59Q96AG4 307 aaKnown RBP21.31■■□□□ 1
DDX41-207ENST00000507900 AAMPQ13685 434 aa21.3■■□□□ 1
DDX41-207ENST00000507900 VIRMAQ69YN4 1812 aaKnown RBP21.29■■□□□ 1
DDX41-207ENST00000507900 PLEKHG5O94827 1062 aa21.28■■□□□ 1
DDX41-207ENST00000507900 TWISTNBQ3B726 338 aaPredicted RBP21.28■■□□□ 1
DDX41-207ENST00000507900 TSPYL6Q8N831 410 aa21.28■■□□□ 1
DDX41-207ENST00000507900 PANK1Q8TE04 598 aa21.28■■□□□ 1
DDX41-207ENST00000507900 C8orf58Q8NAV2 365 aa21.27■■□□□ 1
DDX41-207ENST00000507900 CABLES1Q8TDN4 633 aa21.27■■□□□ 1
DDX41-207ENST00000507900 CEMIPQ8WUJ3 1361 aa21.27■■□□□ 1
DDX41-207ENST00000507900 AHDC1Q5TGY3 1603 aaPredicted RBP21.27■■□□□ 1
DDX41-207ENST00000507900 HAP1P54257 671 aaPredicted RBP21.27■□□□□ 0.99
DDX41-207ENST00000507900 AMOTQ4VCS5 1084 aa21.27■□□□□ 0.99
DDX41-207ENST00000507900 BABAM1Q9NWV8 329 aa21.27■□□□□ 0.99
DDX41-207ENST00000507900 OVOS2A0A0G2JMS6 1433 aa21.27■□□□□ 0.99
DDX41-207ENST00000507900 ADAMTS7Q9UKP4 1686 aa21.27■□□□□ 0.99
DDX41-207ENST00000507900 ROBO1Q9Y6N7 1651 aa21.27■□□□□ 0.99
DDX41-207ENST00000507900 RLBP1P12271 317 aa21.26■□□□□ 0.99
DDX41-207ENST00000507900 ATF7IPQ6VMQ6 1270 aa21.26■□□□□ 0.99
DDX41-207ENST00000507900 IPO8O15397 1037 aaKnown RBP21.25■□□□□ 0.99
DDX41-207ENST00000507900 TRIM27P14373 513 aa21.25■□□□□ 0.99
DDX41-207ENST00000507900 PLEKHO1Q53GL0 409 aaPredicted RBP21.25■□□□□ 0.99
DDX41-207ENST00000507900 COG6Q9Y2V7 657 aa21.25■□□□□ 0.99
DDX41-207ENST00000507900 KDM2BQ8NHM5 1336 aa21.24■□□□□ 0.99
DDX41-207ENST00000507900 DZIP1LQ8IYY4 767 aaKnown RBP21.24■□□□□ 0.99
DDX41-207ENST00000507900 MRPL50Q8N5N7 158 aaKnown RBP21.24■□□□□ 0.99
DDX41-207ENST00000507900 IL17REQ8NFR9 667 aa21.24■□□□□ 0.99
DDX41-207ENST00000507900 TNNQ9UQP3 1299 aa21.24■□□□□ 0.99
DDX41-207ENST00000507900 ARHGAP45Q92619 1136 aa21.23■□□□□ 0.99
DDX41-207ENST00000507900 NOB1Q9ULX3 412 aaKnown RBP21.23■□□□□ 0.99
DDX41-207ENST00000507900 KDM3BQ7LBC6 1761 aa21.23■□□□□ 0.99
DDX41-207ENST00000507900 MVPQ14764 893 aaKnown RBP21.23■□□□□ 0.99
DDX41-207ENST00000507900 AKAP4Q5JQC9 854 aa21.23■□□□□ 0.99
DDX41-207ENST00000507900 PKD1L3Q7Z443 1732 aa21.22■□□□□ 0.99
DDX41-207ENST00000507900 CLUAP1Q96AJ1 413 aa21.22■□□□□ 0.99
DDX41-207ENST00000507900 TSHZ2Q9NRE2 1034 aa21.22■□□□□ 0.99
DDX41-207ENST00000507900 TSPYL4Q9UJ04 414 aa21.22■□□□□ 0.99
DDX41-207ENST00000507900 COL22A1Q8NFW1 1626 aaPredicted RBP21.21■□□□□ 0.99
DDX41-207ENST00000507900 FTSJ3Q8IY81 847 aaKnown RBP21.21■□□□□ 0.99
DDX41-207ENST00000507900 SIPA1L3O60292 1781 aaPredicted RBP21.21■□□□□ 0.99
DDX41-207ENST00000507900 SOS1Q07889 1333 aaPredicted RBP21.2■□□□□ 0.98
DDX41-207ENST00000507900 CENPQQ7L2Z9 268 aaPredicted RBP21.2■□□□□ 0.98
DDX41-207ENST00000507900 ELL2O00472 640 aaPredicted RBP21.19■□□□□ 0.98
DDX41-207ENST00000507900 ZNF530Q6P9A1 599 aaPredicted RBP21.19■□□□□ 0.98
DDX41-207ENST00000507900 TAF7Q15545 349 aaPredicted RBP21.19■□□□□ 0.98
DDX41-207ENST00000507900 CHRNA2Q15822 529 aa21.19■□□□□ 0.98
DDX41-207ENST00000507900 MEGF6O75095 1541 aa21.18■□□□□ 0.98
DDX41-207ENST00000507900 PARP4Q9UKK3 1724 aaKnown RBP21.18■□□□□ 0.98
DDX41-207ENST00000507900 COL5A2P05997 1499 aaPredicted RBP21.17■□□□□ 0.98
DDX41-207ENST00000507900 CACNA1FO60840 1977 aa21.17■□□□□ 0.98
DDX41-207ENST00000507900 NLRP2Q9NX02 1062 aa21.17■□□□□ 0.98
DDX41-207ENST00000507900 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.17■□□□□ 0.983e-6■■■■□ 26.5
DDX41-207ENST00000507900 SCN11AQ9UI33 1791 aa21.17■□□□□ 0.98
DDX41-207ENST00000507900 KRT24Q2M2I5 525 aa21.16■□□□□ 0.98
DDX41-207ENST00000507900 PRDM11Q9NQV5 511 aa21.16■□□□□ 0.98
DDX41-207ENST00000507900 MIS18AQ9NYP9 233 aa21.16■□□□□ 0.98
DDX41-207ENST00000507900 DDX19BQ9UMR2 479 aa21.16■□□□□ 0.98
DDX41-207ENST00000507900 C1orf141Q5JVX7 400 aa21.15■□□□□ 0.98
DDX41-207ENST00000507900 RAPGEF4Q8WZA2 1011 aa21.15■□□□□ 0.98
DDX41-207ENST00000507900 CSB-PGBD3P0DP91 1061 aa21.14■□□□□ 0.98
DDX41-207ENST00000507900 ABCC4O15439 1325 aa21.14■□□□□ 0.97
DDX41-207ENST00000507900 WDR17Q8IZU2 1322 aa21.14■□□□□ 0.97
DDX41-207ENST00000507900 TATP17735 454 aaPredicted RBP21.13■□□□□ 0.97
DDX41-207ENST00000507900 TMEM57Q8N5G2 664 aa21.13■□□□□ 0.97
DDX41-207ENST00000507900 API5Q9BZZ5 524 aaKnown RBP21.13■□□□□ 0.97
DDX41-207ENST00000507900 LGR6Q9HBX8 967 aa21.13■□□□□ 0.97
DDX41-207ENST00000507900 RNMTO43148 476 aaKnown RBP21.12■□□□□ 0.97
DDX41-207ENST00000507900 COL14A1Q05707 1796 aaKnown RBP21.11■□□□□ 0.97
DDX41-207ENST00000507900 COL16A1Q07092 1604 aaPredicted RBP21.11■□□□□ 0.97
DDX41-207ENST00000507900 RGS12O14924 1447 aa21.11■□□□□ 0.97
DDX41-207ENST00000507900 ITPRIPQ8IWB1 547 aa21.1■□□□□ 0.97
DDX41-207ENST00000507900 SPG7Q9UQ90 795 aa21.1■□□□□ 0.97
DDX41-207ENST00000507900 PHLPP1O60346 1717 aa21.1■□□□□ 0.97
DDX41-207ENST00000507900 PTPRCP08575 1304 aa21.1■□□□□ 0.97
DDX41-207ENST00000507900 MRC1P22897 1456 aa21.09■□□□□ 0.97
DDX41-207ENST00000507900 TEFQ10587 303 aa21.09■□□□□ 0.97
DDX41-207ENST00000507900 MPRIPQ6WCQ1 1025 aa21.09■□□□□ 0.97
DDX41-207ENST00000507900 PCDHB15Q9Y5E8 787 aa21.09■□□□□ 0.97
DDX41-207ENST00000507900 TCERG1O14776 1098 aaKnown RBP21.08■□□□□ 0.97
DDX41-207ENST00000507900 HOXB7P09629 217 aa21.08■□□□□ 0.97
DDX41-207ENST00000507900 CHMP4BQ9H444 224 aaKnown RBP21.08■□□□□ 0.97
DDX41-207ENST00000507900 ZBTB40Q9NUA8 1239 aa21.08■□□□□ 0.97
DDX41-207ENST00000507900 KDM6AO15550 1401 aaPredicted RBP21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms