RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 HSPA6P17066 643 aa8.94□□□□□ -0.98
VEGFC-201ENST00000507638 PTCH1Q13635 1447 aa8.94□□□□□ -0.98
VEGFC-201ENST00000507638 RALGAPBQ86X10 1494 aa8.94□□□□□ -0.98
VEGFC-201ENST00000507638 FECHP22830 423 aa8.93□□□□□ -0.98
VEGFC-201ENST00000507638 DAXXQ9UER7 740 aaPredicted RBP8.93□□□□□ -0.98
VEGFC-201ENST00000507638 ARHGAP35Q9NRY4 1499 aa8.93□□□□□ -0.98
VEGFC-201ENST00000507638 ASXL1Q8IXJ9 1541 aa8.93□□□□□ -0.98
VEGFC-201ENST00000507638 SPHKAPQ2M3C7 1700 aa8.92□□□□□ -0.98
VEGFC-201ENST00000507638 GLI3P10071 1580 aa8.92□□□□□ -0.98
VEGFC-201ENST00000507638 SWT1Q5T5J6 900 aaKnown RBP8.92□□□□□ -0.98
VEGFC-201ENST00000507638 HPS5Q9UPZ3 1129 aa8.92□□□□□ -0.98
VEGFC-201ENST00000507638 KIAA1107Q9UPP5 1409 aa8.91□□□□□ -0.98
VEGFC-201ENST00000507638 BCAMP50895 628 aa8.91□□□□□ -0.98
VEGFC-201ENST00000507638 PTPN5P54829 565 aa8.91□□□□□ -0.98
VEGFC-201ENST00000507638 UNC5CLQ8IV45 518 aa8.91□□□□□ -0.98
VEGFC-201ENST00000507638 FAM83GA6ND36 823 aa8.9□□□□□ -0.98
VEGFC-201ENST00000507638 C3orf80F5H4A9 247 aa8.9□□□□□ -0.98
VEGFC-201ENST00000507638 CLCN1P35523 988 aa8.9□□□□□ -0.98
VEGFC-201ENST00000507638 CCDC102AQ96A19 550 aa8.9□□□□□ -0.98
VEGFC-201ENST00000507638 AK7Q96M32 723 aa8.9□□□□□ -0.98
VEGFC-201ENST00000507638 CAMKK2Q96RR4 588 aa8.9□□□□□ -0.98
VEGFC-201ENST00000507638 GPATCH8Q9UKJ3 1502 aaKnown RBP8.9□□□□□ -0.99
VEGFC-201ENST00000507638 NBPF8Q3BBV2 869 aa8.89□□□□□ -0.99
VEGFC-201ENST00000507638 KMT5BQ4FZB7 885 aa8.89□□□□□ -0.99
VEGFC-201ENST00000507638 NBPF14Q5TI25 921 aa8.89□□□□□ -0.99
VEGFC-201ENST00000507638 CFDP1Q9UEE9 299 aaPredicted RBP8.89□□□□□ -0.99
VEGFC-201ENST00000507638 RNF40O75150 1001 aa8.88□□□□□ -0.99
VEGFC-201ENST00000507638 FAM182BQ5T319 152 aa8.88□□□□□ -0.99
VEGFC-201ENST00000507638 A0A0G2JS52 829 aa8.87□□□□□ -0.99
VEGFC-201ENST00000507638 MYT1Q01538 1121 aa8.87□□□□□ -0.99
VEGFC-201ENST00000507638 FAM161AQ3B820 660 aa8.87□□□□□ -0.99
VEGFC-201ENST00000507638 WBP1LQ9NX94 342 aa8.87□□□□□ -0.99
VEGFC-201ENST00000507638 PIK3C2BO00750 1634 aa8.87□□□□□ -0.99
VEGFC-201ENST00000507638 PLEKHH2Q8IVE3 1493 aa8.86□□□□□ -0.99
VEGFC-201ENST00000507638 IDI1Q13907 227 aa8.86□□□□□ -0.99
VEGFC-201ENST00000507638 AMHR2Q16671 573 aa8.86□□□□□ -0.99
VEGFC-201ENST00000507638 SYT17Q9BSW7 474 aa8.86□□□□□ -0.99
VEGFC-201ENST00000507638 GPCPD1Q9NPB8 672 aa8.86□□□□□ -0.99
VEGFC-201ENST00000507638 CCDC9Q9Y3X0 531 aaKnown RBP8.86□□□□□ -0.99
VEGFC-201ENST00000507638 TBX22Q9Y458 520 aa8.86□□□□□ -0.99
VEGFC-201ENST00000507638 MST1RQ04912 1400 aa8.86□□□□□ -0.99
VEGFC-201ENST00000507638 RGPD1P0DJD0 1748 aa8.85□□□□□ -0.99
VEGFC-201ENST00000507638 LRRIQ1Q96JM4 1722 aa8.85□□□□□ -0.99
VEGFC-201ENST00000507638 ZNF644Q9H582 1327 aaPredicted RBP8.85□□□□□ -0.99
VEGFC-201ENST00000507638 MARF1Q9Y4F3 1742 aaKnown RBP8.85□□□□□ -0.99
VEGFC-201ENST00000507638 SOS2Q07890 1332 aaPredicted RBP8.84□□□□□ -0.99
VEGFC-201ENST00000507638 DNAJC5GQ8N7S2 189 aa8.84□□□□□ -0.99
VEGFC-201ENST00000507638 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.83□□□□□ -1
VEGFC-201ENST00000507638 DISP2A7MBM2 1401 aa8.83□□□□□ -1
VEGFC-201ENST00000507638 FMN1Q68DA7 1419 aa8.83□□□□□ -1
VEGFC-201ENST00000507638 ITGBL1O95965 494 aaPredicted RBP8.83□□□□□ -1
VEGFC-201ENST00000507638 APBA3O96018 575 aa8.83□□□□□ -1
VEGFC-201ENST00000507638 FHDC1Q9C0D6 1143 aaPredicted RBP8.83□□□□□ -1
VEGFC-201ENST00000507638 AMOTL2Q9Y2J4 779 aa8.83□□□□□ -1
VEGFC-201ENST00000507638 EFCAB6Q5THR3 1501 aa8.83□□□□□ -1
VEGFC-201ENST00000507638 TRIM37O94972 964 aa8.82□□□□□ -1
VEGFC-201ENST00000507638 VPS72Q15906 364 aa8.82□□□□□ -1
VEGFC-201ENST00000507638 GPR162Q16538 588 aa8.82□□□□□ -1
VEGFC-201ENST00000507638 GRIPAP1Q4V328 841 aa8.82□□□□□ -1
VEGFC-201ENST00000507638 ACTN4O43707 911 aaKnown RBP8.81□□□□□ -1
VEGFC-201ENST00000507638 PHOX2BQ99453 314 aa8.81□□□□□ -1
VEGFC-201ENST00000507638 DCCP43146 1447 aa8.8□□□□□ -1
VEGFC-201ENST00000507638 CEP152O94986 1710 aa8.8□□□□□ -1
VEGFC-201ENST00000507638 SHANK3Q9BYB0 1731 aa8.8□□□□□ -1
VEGFC-201ENST00000507638 CFHP08603 1231 aa8.8□□□□□ -1
VEGFC-201ENST00000507638 RDH13Q8NBN7 331 aa8.8□□□□□ -1
VEGFC-201ENST00000507638 ORAI2Q96SN7 254 aa8.8□□□□□ -1
VEGFC-201ENST00000507638 WWC3Q9ULE0 1092 aa8.8□□□□□ -1
VEGFC-201ENST00000507638 SLIT2O94813 1529 aa8.8□□□□□ -1
VEGFC-201ENST00000507638 NRKQ7Z2Y5 1582 aa8.79□□□□□ -1
VEGFC-201ENST00000507638 MYOM2P54296 1465 aa8.79□□□□□ -1
VEGFC-201ENST00000507638 MBD5Q9P267 1494 aa8.79□□□□□ -1
VEGFC-201ENST00000507638 PLEKHG1Q9ULL1 1385 aa8.79□□□□□ -1
VEGFC-201ENST00000507638 DDX11L8A8MPP1 907 aa8.79□□□□□ -1
VEGFC-201ENST00000507638 ZBTB7AO95365 584 aa8.79□□□□□ -1
VEGFC-201ENST00000507638 USP46P62068 366 aa8.79□□□□□ -1
VEGFC-201ENST00000507638 MDM2Q00987 491 aaPredicted RBP8.79□□□□□ -1
VEGFC-201ENST00000507638 KCNC4Q03721 635 aa8.79□□□□□ -1
VEGFC-201ENST00000507638 TTLL12Q14166 644 aaPredicted RBP8.79□□□□□ -1
VEGFC-201ENST00000507638 IL21Q9HBE4 155 aa8.79□□□□□ -1
VEGFC-201ENST00000507638 PLA2G2EQ9NZK7 142 aa8.79□□□□□ -1
VEGFC-201ENST00000507638 TNS1Q9HBL0 1735 aaKnown RBP8.79□□□□□ -1
VEGFC-201ENST00000507638 TRIM66O15016 1216 aa8.78□□□□□ -1
VEGFC-201ENST00000507638 APLP1P51693 650 aa8.78□□□□□ -1
VEGFC-201ENST00000507638 DIXDC1Q155Q3 683 aa8.78□□□□□ -1
VEGFC-201ENST00000507638 TMUB1Q9BVT8 246 aa8.78□□□□□ -1
VEGFC-201ENST00000507638 PCDHB3Q9Y5E6 796 aa8.78□□□□□ -1
VEGFC-201ENST00000507638 COL22A1Q8NFW1 1626 aaPredicted RBP8.78□□□□□ -1
VEGFC-201ENST00000507638 PARD3Q8TEW0 1356 aa8.77□□□□□ -1.01
VEGFC-201ENST00000507638 NR1I2O75469 434 aa8.77□□□□□ -1.01
VEGFC-201ENST00000507638 SLC10A3P09131 477 aa8.77□□□□□ -1.01
VEGFC-201ENST00000507638 CD46P15529 392 aa8.77□□□□□ -1.01
VEGFC-201ENST00000507638 GCGRP47871 477 aa8.77□□□□□ -1.01
VEGFC-201ENST00000507638 PDGFDQ9GZP0 370 aaPredicted RBP8.77□□□□□ -1.01
VEGFC-201ENST00000507638 GPBP1L1Q9HC44 474 aaPredicted RBP8.77□□□□□ -1.01
VEGFC-201ENST00000507638 FAM217BQ9NTX9 383 aaPredicted RBP8.77□□□□□ -1.01
VEGFC-201ENST00000507638 CCNB3Q8WWL7 1395 aa8.76□□□□□ -1.01
VEGFC-201ENST00000507638 MYOM1P52179 1685 aa8.76□□□□□ -1.01
VEGFC-201ENST00000507638 NUP188Q5SRE5 1749 aa8.76□□□□□ -1.01
VEGFC-201ENST00000507638 ADGRL3Q9HAR2 1447 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms