RNA–Protein interactions for RNA: ENST00000507488.6

ATP2C1-212, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATP2C1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-212ENST00000507488 MPRIPQ6WCQ1 1025 aa5.85□□□□□ -1.47
ATP2C1-212ENST00000507488 MYH16Q9H6N6 1097 aa5.85□□□□□ -1.47
ATP2C1-212ENST00000507488 USP35Q9P2H5 1018 aa5.85□□□□□ -1.47
ATP2C1-212ENST00000507488 NALCNQ8IZF0 1738 aa5.85□□□□□ -1.47
ATP2C1-212ENST00000507488 SLC4A10Q6U841 1118 aa5.85□□□□□ -1.47
ATP2C1-212ENST00000507488 JARID2Q92833 1246 aaPredicted RBP5.85□□□□□ -1.47
ATP2C1-212ENST00000507488 MEIS3Q99687 375 aa5.85□□□□□ -1.47
ATP2C1-212ENST00000507488 PHAXQ9H814 394 aaKnown RBP5.85□□□□□ -1.47
ATP2C1-212ENST00000507488 ZBTB40Q9NUA8 1239 aa5.85□□□□□ -1.47
ATP2C1-212ENST00000507488 PHF8Q9UPP1 1060 aa5.85□□□□□ -1.47
ATP2C1-212ENST00000507488 RGPD2P0DJD1 1756 aa5.85□□□□□ -1.47
ATP2C1-212ENST00000507488 AKAP12Q02952 1782 aa5.85□□□□□ -1.47
ATP2C1-212ENST00000507488 ANKLE2Q86XL3 938 aa5.85□□□□□ -1.47
ATP2C1-212ENST00000507488 SLIT1O75093 1534 aa5.84□□□□□ -1.47
ATP2C1-212ENST00000507488 MARF1Q9Y4F3 1742 aaKnown RBP5.84□□□□□ -1.47
ATP2C1-212ENST00000507488 ZBTB7BO15156 539 aaPredicted RBP5.84□□□□□ -1.47
ATP2C1-212ENST00000507488 PSME1Q06323 249 aa5.84□□□□□ -1.47
ATP2C1-212ENST00000507488 DAXXQ9UER7 740 aaPredicted RBP5.84□□□□□ -1.47
ATP2C1-212ENST00000507488 TOPAZ1Q8N9V7 1692 aa5.84□□□□□ -1.48
ATP2C1-212ENST00000507488 SLC4A2P04920 1241 aa5.83□□□□□ -1.48
ATP2C1-212ENST00000507488 PROSER3Q2NL68 480 aa5.83□□□□□ -1.48
ATP2C1-212ENST00000507488 RBM42Q9BTD8 480 aaKnown RBP5.83□□□□□ -1.48
ATP2C1-212ENST00000507488 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.83□□□□□ -1.48
ATP2C1-212ENST00000507488 ITSN1Q15811 1721 aa5.83□□□□□ -1.48
ATP2C1-212ENST00000507488 KNDC1Q76NI1 1749 aa5.83□□□□□ -1.48
ATP2C1-212ENST00000507488 KDM4FA0A1W2PPD8 638 aa5.83□□□□□ -1.48
ATP2C1-212ENST00000507488 EIF2S2P20042 333 aaKnown RBP5.83□□□□□ -1.48
ATP2C1-212ENST00000507488 SLC39A6Q13433 755 aa5.83□□□□□ -1.48
ATP2C1-212ENST00000507488 CFAP44Q96MT7 982 aa5.83□□□□□ -1.48
ATP2C1-212ENST00000507488 RGS12O14924 1447 aa5.83□□□□□ -1.48
ATP2C1-212ENST00000507488 PXDNQ92626 1479 aa5.83□□□□□ -1.48
ATP2C1-212ENST00000507488 CDK12Q9NYV4 1490 aaPredicted RBP5.83□□□□□ -1.48
ATP2C1-212ENST00000507488 NWD1Q149M9 1564 aa5.83□□□□□ -1.48
ATP2C1-212ENST00000507488 PROSER2Q86WR7 435 aaPredicted RBP5.83□□□□□ -1.48
ATP2C1-212ENST00000507488 ZNF692Q9BU19 519 aaPredicted RBP5.83□□□□□ -1.48
ATP2C1-212ENST00000507488 CRB1P82279 1406 aa5.83□□□□□ -1.48
ATP2C1-212ENST00000507488 CD2BP2O95400 341 aaKnown RBP5.82□□□□□ -1.48
ATP2C1-212ENST00000507488 HDGFP51858 240 aaKnown RBP5.82□□□□□ -1.48
ATP2C1-212ENST00000507488 AAMPQ13685 434 aa5.82□□□□□ -1.48
ATP2C1-212ENST00000507488 SLKQ9H2G2 1235 aaPredicted RBP5.82□□□□□ -1.48
ATP2C1-212ENST00000507488 PIK3R4Q99570 1358 aa5.82□□□□□ -1.48
ATP2C1-212ENST00000507488 MSH6P52701 1360 aa5.82□□□□□ -1.48
ATP2C1-212ENST00000507488 MFAP1P55081 439 aaKnown RBP5.82□□□□□ -1.48
ATP2C1-212ENST00000507488 AATKQ6ZMQ8 1374 aa5.82□□□□□ -1.48
ATP2C1-212ENST00000507488 USP31Q70CQ4 1352 aa5.82□□□□□ -1.48
ATP2C1-212ENST00000507488 TSPYL4Q9UJ04 414 aa5.82□□□□□ -1.48
ATP2C1-212ENST00000507488 STRCP1A6NGW2 1772 aa5.82□□□□□ -1.48
ATP2C1-212ENST00000507488 XRN1Q8IZH2 1706 aaKnown RBP5.82□□□□□ -1.48
ATP2C1-212ENST00000507488 ZNF335Q9H4Z2 1342 aaPredicted RBP5.82□□□□□ -1.48
ATP2C1-212ENST00000507488 CHL1O00533 1208 aa5.82□□□□□ -1.48
ATP2C1-212ENST00000507488 ANKRD45Q5TZF3 282 aa5.82□□□□□ -1.48
ATP2C1-212ENST00000507488 FOXD4L1Q9NU39 408 aa5.82□□□□□ -1.48
ATP2C1-212ENST00000507488 GCP02774 474 aa5.81□□□□□ -1.48
ATP2C1-212ENST00000507488 CHAMP1Q96JM3 812 aa5.81□□□□□ -1.48
ATP2C1-212ENST00000507488 IFT57Q9NWB7 429 aa5.81□□□□□ -1.48
ATP2C1-212ENST00000507488 IGSF1Q8N6C5 1336 aa5.81□□□□□ -1.48
ATP2C1-212ENST00000507488 PNMA6EA0A0J9YXQ4 647 aa5.81□□□□□ -1.48
ATP2C1-212ENST00000507488 SIRT1Q96EB6 747 aa5.81□□□□□ -1.48
ATP2C1-212ENST00000507488 GSPT1P15170 499 aaKnown RBP5.8□□□□□ -1.48
ATP2C1-212ENST00000507488 TPRNQ4KMQ1 711 aa5.8□□□□□ -1.48
ATP2C1-212ENST00000507488 EXOC6BQ9Y2D4 811 aa5.8□□□□□ -1.48
ATP2C1-212ENST00000507488 PTCH1Q13635 1447 aa5.8□□□□□ -1.48
ATP2C1-212ENST00000507488 TMEM94Q12767 1356 aa5.8□□□□□ -1.48
ATP2C1-212ENST00000507488 MAP4K4O95819 1239 aaPredicted RBP5.8□□□□□ -1.48
ATP2C1-212ENST00000507488 KRT28Q7Z3Y7 464 aa5.8□□□□□ -1.48
ATP2C1-212ENST00000507488 IL25Q9H293 177 aa5.8□□□□□ -1.48
ATP2C1-212ENST00000507488 CT47B1P0C2W7 299 aaPredicted RBP5.8□□□□□ -1.48
ATP2C1-212ENST00000507488 GNAI1P63096 354 aa5.8□□□□□ -1.48
ATP2C1-212ENST00000507488 NFKBIBQ15653 356 aa5.8□□□□□ -1.48
ATP2C1-212ENST00000507488 RWDD1Q9H446 243 aaPredicted RBP5.8□□□□□ -1.48
ATP2C1-212ENST00000507488 NPHP4O75161 1426 aaPredicted RBP5.79□□□□□ -1.48
ATP2C1-212ENST00000507488 RGPD1P0DJD0 1748 aa5.79□□□□□ -1.48
ATP2C1-212ENST00000507488 FLT4P35916 1363 aa5.79□□□□□ -1.48
ATP2C1-212ENST00000507488 CHGBP05060 677 aa5.79□□□□□ -1.48
ATP2C1-212ENST00000507488 COL9A3Q14050 684 aaPredicted RBP5.79□□□□□ -1.48
ATP2C1-212ENST00000507488 SBNO1A3KN83 1393 aa5.79□□□□□ -1.48
ATP2C1-212ENST00000507488 RGPD5Q99666 1765 aa5.79□□□□□ -1.48
ATP2C1-212ENST00000507488 FRAT2O75474 233 aaPredicted RBP5.79□□□□□ -1.48
ATP2C1-212ENST00000507488 ANKRD24Q8TF21 1146 aa5.79□□□□□ -1.48
ATP2C1-212ENST00000507488 ARXQ96QS3 562 aa5.79□□□□□ -1.48
ATP2C1-212ENST00000507488 RNF39Q9H2S5 420 aa5.79□□□□□ -1.48
ATP2C1-212ENST00000507488 CHPF2Q9P2E5 772 aa5.79□□□□□ -1.48
ATP2C1-212ENST00000507488 ABCC4O15439 1325 aa5.79□□□□□ -1.48
ATP2C1-212ENST00000507488 ADAMTSL3P82987 1691 aa5.79□□□□□ -1.48
ATP2C1-212ENST00000507488 DCAF8L1A6NGE4 600 aa5.78□□□□□ -1.48
ATP2C1-212ENST00000507488 KLHDC4Q8TBB5 520 aa5.78□□□□□ -1.48
ATP2C1-212ENST00000507488 CHD2O14647 1828 aaKnown RBP5.78□□□□□ -1.48
ATP2C1-212ENST00000507488 NBPF7P0C2Y1 421 aaPredicted RBP5.78□□□□□ -1.48
ATP2C1-212ENST00000507488 AIMP1Q12904 312 aaKnown RBP5.78□□□□□ -1.48
ATP2C1-212ENST00000507488 CENPFP49454 3210 aa5.78□□□□□ -1.48
ATP2C1-212ENST00000507488 FMN2Q9NZ56 1722 aa5.78□□□□□ -1.48
ATP2C1-212ENST00000507488 CWF19L2Q2TBE0 894 aaKnown RBP5.78□□□□□ -1.48
ATP2C1-212ENST00000507488 UNC5CLQ8IV45 518 aa5.78□□□□□ -1.48
ATP2C1-212ENST00000507488 IL16Q14005 1332 aa5.78□□□□□ -1.48
ATP2C1-212ENST00000507488 LTN1O94822 1766 aa5.77□□□□□ -1.49
ATP2C1-212ENST00000507488 NUCB1Q02818 461 aa5.77□□□□□ -1.49
ATP2C1-212ENST00000507488 SMIM5Q71RC9 77 aa5.77□□□□□ -1.49
ATP2C1-212ENST00000507488 ARHGEF25Q86VW2 580 aa5.77□□□□□ -1.49
ATP2C1-212ENST00000507488 CHD1LQ86WJ1 897 aa5.77□□□□□ -1.49
ATP2C1-212ENST00000507488 PNNQ9H307 717 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms