RNA–Protein interactions for RNA: ENST00000507471.1

TSPAN17-206, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-206ENST00000507471 FBLN1P23142 703 aa19.55■□□□□ 0.72
TSPAN17-206ENST00000507471 PRIM1P49642 420 aaKnown RBP19.55■□□□□ 0.72
TSPAN17-206ENST00000507471 KCNQ4P56696 695 aa19.55■□□□□ 0.72
TSPAN17-206ENST00000507471 SYTL4Q96C24 671 aaPredicted RBP19.55■□□□□ 0.72
TSPAN17-206ENST00000507471 MEGF6O75095 1541 aa19.55■□□□□ 0.72
TSPAN17-206ENST00000507471 ST20-MTHFSA0A0A6YYL1 179 aa19.53■□□□□ 0.72
TSPAN17-206ENST00000507471 AMPHP49418 695 aa19.53■□□□□ 0.72
TSPAN17-206ENST00000507471 TFCP2L1Q9NZI6 479 aa19.53■□□□□ 0.72
TSPAN17-206ENST00000507471 POLD1P28340 1107 aa19.52■□□□□ 0.72
TSPAN17-206ENST00000507471 GPR162Q16538 588 aa19.52■□□□□ 0.72
TSPAN17-206ENST00000507471 KLHL34Q8N239 644 aa19.52■□□□□ 0.72
TSPAN17-206ENST00000507471 ZCRB1Q8TBF4 217 aaKnown RBP19.51■□□□□ 0.71
TSPAN17-206ENST00000507471 RTL1A6NKG5 1358 aa19.51■□□□□ 0.71
TSPAN17-206ENST00000507471 RRS1Q15050 365 aaKnown RBP19.48■□□□□ 0.71
TSPAN17-206ENST00000507471 CCNL1Q9UK58 526 aaPredicted RBP19.48■□□□□ 0.71
TSPAN17-206ENST00000507471 C1QTNF8P60827 252 aa19.47■□□□□ 0.71
TSPAN17-206ENST00000507471 NBPF6Q5VWK0 638 aa19.47■□□□□ 0.71
TSPAN17-206ENST00000507471 NLGN2Q8NFZ4 835 aa19.47■□□□□ 0.71
TSPAN17-206ENST00000507471 NBPF4Q96M43 638 aa19.47■□□□□ 0.71
TSPAN17-206ENST00000507471 USP47Q96K76 1375 aa19.46■□□□□ 0.71
TSPAN17-206ENST00000507471 SLC24A1O60721 1099 aa19.46■□□□□ 0.71
TSPAN17-206ENST00000507471 PELP1Q8IZL8 1130 aaKnown RBP19.46■□□□□ 0.71
TSPAN17-206ENST00000507471 USHBP1Q8N6Y0 703 aa19.46■□□□□ 0.71
TSPAN17-206ENST00000507471 FYB1O15117 783 aa19.45■□□□□ 0.7
TSPAN17-206ENST00000507471 GGNBP2Q9H3C7 697 aa19.45■□□□□ 0.7
TSPAN17-206ENST00000507471 C5P01031 1676 aa19.45■□□□□ 0.7
TSPAN17-206ENST00000507471 CGNL1Q0VF96 1302 aa19.45■□□□□ 0.7
TSPAN17-206ENST00000507471 SMG6Q86US8 1419 aaKnown RBP19.44■□□□□ 0.7
TSPAN17-206ENST00000507471 SENP3-EIF4A1A0A087X0R7 540 aa19.44■□□□□ 0.7
TSPAN17-206ENST00000507471 COL23A1Q86Y22 540 aaPredicted RBP19.43■□□□□ 0.7
TSPAN17-206ENST00000507471 RAPGEF4Q8WZA2 1011 aa19.43■□□□□ 0.7
TSPAN17-206ENST00000507471 KIF20BQ96Q89 1820 aa19.43■□□□□ 0.7
TSPAN17-206ENST00000507471 MSH5O43196 834 aa19.42■□□□□ 0.7
TSPAN17-206ENST00000507471 TATP17735 454 aaPredicted RBP19.41■□□□□ 0.7
TSPAN17-206ENST00000507471 INSRP06213 1382 aa19.41■□□□□ 0.7
TSPAN17-206ENST00000507471 TAF1LQ8IZX4 1826 aa19.4■□□□□ 0.7
TSPAN17-206ENST00000507471 TMF1P82094 1093 aa19.4■□□□□ 0.7
TSPAN17-206ENST00000507471 HSP90AB2PQ58FF8 381 aa19.4■□□□□ 0.7
TSPAN17-206ENST00000507471 PCDH11XQ9BZA7 1347 aa19.4■□□□□ 0.7
TSPAN17-206ENST00000507471 PCDH11YQ9BZA8 1340 aa19.4■□□□□ 0.7
TSPAN17-206ENST00000507471 TOGARAM1Q9Y4F4 1720 aa19.39■□□□□ 0.7
TSPAN17-206ENST00000507471 YBX3P16989 372 aaKnown RBP eCLIP19.39■□□□□ 0.691e-6■■□□□ 11.7
TSPAN17-206ENST00000507471 MSL1Q68DK7 614 aa19.39■□□□□ 0.69
TSPAN17-206ENST00000507471 FLT4P35916 1363 aa19.39■□□□□ 0.69
TSPAN17-206ENST00000507471 GIGYF1O75420 1035 aaPredicted RBP19.38■□□□□ 0.69
TSPAN17-206ENST00000507471 PALLDQ8WX93 1383 aa19.38■□□□□ 0.69
TSPAN17-206ENST00000507471 PKD1L3Q7Z443 1732 aa19.37■□□□□ 0.69
TSPAN17-206ENST00000507471 KIF24Q5T7B8 1368 aa19.37■□□□□ 0.69
TSPAN17-206ENST00000507471 ITGB4P16144 1822 aa19.36■□□□□ 0.69
TSPAN17-206ENST00000507471 C4BP0C0L5 1744 aa19.36■□□□□ 0.69
TSPAN17-206ENST00000507471 GOLGB1Q14789 3259 aaKnown RBP19.36■□□□□ 0.69
TSPAN17-206ENST00000507471 CYP27B1O15528 508 aa19.35■□□□□ 0.69
TSPAN17-206ENST00000507471 GRIN3BO60391 1043 aa19.35■□□□□ 0.69
TSPAN17-206ENST00000507471 MPRIPQ6WCQ1 1025 aa19.35■□□□□ 0.69
TSPAN17-206ENST00000507471 FLAD1Q8NFF5 587 aa19.33■□□□□ 0.68
TSPAN17-206ENST00000507471 NCAPD2Q15021 1401 aa19.33■□□□□ 0.68
TSPAN17-206ENST00000507471 ANKRD26Q9UPS8 1709 aa19.32■□□□□ 0.68
TSPAN17-206ENST00000507471 CARD14Q9BXL6 1004 aa19.32■□□□□ 0.68
TSPAN17-206ENST00000507471 CD2APQ9Y5K6 639 aa19.32■□□□□ 0.68
TSPAN17-206ENST00000507471 EMILIN1Q9Y6C2 1016 aa19.32■□□□□ 0.68
TSPAN17-206ENST00000507471 UBR3Q6ZT12 1888 aa19.31■□□□□ 0.68
TSPAN17-206ENST00000507471 HMGB2P26583 209 aaKnown RBP19.31■□□□□ 0.68
TSPAN17-206ENST00000507471 CDCA8Q53HL2 280 aa19.31■□□□□ 0.68
TSPAN17-206ENST00000507471 AMIGO3Q86WK7 504 aa19.31■□□□□ 0.68
TSPAN17-206ENST00000507471 NSD3Q9BZ95 1437 aa19.31■□□□□ 0.68
TSPAN17-206ENST00000507471 SMARCC1Q92922 1105 aaPredicted RBP19.3■□□□□ 0.68
TSPAN17-206ENST00000507471 PIGBQ92521 554 aa19.29■□□□□ 0.68
TSPAN17-206ENST00000507471 AK7Q96M32 723 aa19.29■□□□□ 0.68
TSPAN17-206ENST00000507471 MAP2P11137 1827 aaKnown RBP19.29■□□□□ 0.68
TSPAN17-206ENST00000507471 ATP10DQ9P241 1426 aa19.28■□□□□ 0.68
TSPAN17-206ENST00000507471 NKX1-1Q15270 411 aaPredicted RBP19.28■□□□□ 0.68
TSPAN17-206ENST00000507471 SMIM5Q71RC9 77 aa19.28■□□□□ 0.68
TSPAN17-206ENST00000507471 PHF14O94880 888 aa19.27■□□□□ 0.68
TSPAN17-206ENST00000507471 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.26■□□□□ 0.67
TSPAN17-206ENST00000507471 PPM1GO15355 546 aaPredicted RBP19.26■□□□□ 0.67
TSPAN17-206ENST00000507471 SPG7Q9UQ90 795 aa19.26■□□□□ 0.67
TSPAN17-206ENST00000507471 ADCY9O60503 1353 aa19.24■□□□□ 0.67
TSPAN17-206ENST00000507471 LOC102724428A0A0B4J2F2 783 aa19.24■□□□□ 0.67
TSPAN17-206ENST00000507471 SIK1P57059 783 aa19.24■□□□□ 0.67
TSPAN17-206ENST00000507471 LINC00116Q8NCU8 138 aa19.24■□□□□ 0.67
TSPAN17-206ENST00000507471 EYA1Q99502 592 aa19.24■□□□□ 0.67
TSPAN17-206ENST00000507471 WASHC2AQ641Q2 1341 aa19.24■□□□□ 0.67
TSPAN17-206ENST00000507471 SSFA2P28290 1259 aa19.23■□□□□ 0.67
TSPAN17-206ENST00000507471 IGSF1Q8N6C5 1336 aa19.23■□□□□ 0.67
TSPAN17-206ENST00000507471 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.22■□□□□ 0.67
TSPAN17-206ENST00000507471 GPBP1L1Q9HC44 474 aaPredicted RBP19.21■□□□□ 0.67
TSPAN17-206ENST00000507471 TMOD3Q9NYL9 352 aa19.21■□□□□ 0.67
TSPAN17-206ENST00000507471 WWC3Q9ULE0 1092 aa19.21■□□□□ 0.67
TSPAN17-206ENST00000507471 ASAP1Q9ULH1 1129 aa19.21■□□□□ 0.67
TSPAN17-206ENST00000507471 PHKG2P15735 406 aa19.2■□□□□ 0.66
TSPAN17-206ENST00000507471 ITPK1Q13572 414 aa19.2■□□□□ 0.66
TSPAN17-206ENST00000507471 POLKQ9UBT6 870 aa19.2■□□□□ 0.66
TSPAN17-206ENST00000507471 IFNL2Q8IZJ0 200 aa19.19■□□□□ 0.66
TSPAN17-206ENST00000507471 GNPATO15228 680 aa19.18■□□□□ 0.66
TSPAN17-206ENST00000507471 ATP6V1AP38606 617 aa19.18■□□□□ 0.66
TSPAN17-206ENST00000507471 ZNF526Q8TF50 670 aaPredicted RBP19.18■□□□□ 0.66
TSPAN17-206ENST00000507471 ATG3Q9NT62 314 aa19.17■□□□□ 0.66
TSPAN17-206ENST00000507471 CICQ96RK0 1608 aaPredicted RBP19.16■□□□□ 0.66
TSPAN17-206ENST00000507471 EIF4A2Q14240 407 aaKnown RBP19.16■□□□□ 0.66
TSPAN17-206ENST00000507471 KIAA1551Q9HCM1 1747 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms