RNA–Protein interactions for RNA: ENST00000507395.1

SFXN1-207, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-207ENST00000507395 NCAPD2Q15021 1401 aa24.47■■□□□ 1.51
SFXN1-207ENST00000507395 ZCRB1Q8TBF4 217 aaKnown RBP24.47■■□□□ 1.51
SFXN1-207ENST00000507395 POLR3GLQ9BT43 218 aa24.47■■□□□ 1.51
SFXN1-207ENST00000507395 PAPPAQ13219 1627 aa24.46■■□□□ 1.51
SFXN1-207ENST00000507395 SMG6Q86US8 1419 aaKnown RBP24.46■■□□□ 1.51
SFXN1-207ENST00000507395 PANK3Q9H999 370 aa24.45■■□□□ 1.5
SFXN1-207ENST00000507395 POLKQ9UBT6 870 aa24.45■■□□□ 1.5
SFXN1-207ENST00000507395 DOT1LQ8TEK3 1739 aa24.44■■□□□ 1.5
SFXN1-207ENST00000507395 NSD2O96028 1365 aa24.44■■□□□ 1.5
SFXN1-207ENST00000507395 WASHC2AQ641Q2 1341 aa24.44■■□□□ 1.5
SFXN1-207ENST00000507395 PDGFDQ9GZP0 370 aaPredicted RBP24.44■■□□□ 1.5
SFXN1-207ENST00000507395 LRRC4BQ9NT99 713 aa24.41■■□□□ 1.5
SFXN1-207ENST00000507395 SLC15A2Q16348 729 aa24.4■■□□□ 1.5
SFXN1-207ENST00000507395 PRIM1P49642 420 aaKnown RBP24.39■■□□□ 1.49
SFXN1-207ENST00000507395 RAPGEF4Q8WZA2 1011 aa24.39■■□□□ 1.49
SFXN1-207ENST00000507395 PKD1L3Q7Z443 1732 aa24.38■■□□□ 1.49
SFXN1-207ENST00000507395 KAT6BQ8WYB5 2073 aa24.38■■□□□ 1.49
SFXN1-207ENST00000507395 TATP17735 454 aaPredicted RBP24.38■■□□□ 1.49
SFXN1-207ENST00000507395 PPM1GO15355 546 aaPredicted RBP24.37■■□□□ 1.49
SFXN1-207ENST00000507395 SPON1Q9HCB6 807 aa24.37■■□□□ 1.49
SFXN1-207ENST00000507395 LY75O60449 1722 aa24.37■■□□□ 1.49
SFXN1-207ENST00000507395 EYA1Q99502 592 aa24.36■■□□□ 1.49
SFXN1-207ENST00000507395 STK32BQ9NY57 414 aa24.36■■□□□ 1.49
SFXN1-207ENST00000507395 CYP27B1O15528 508 aa24.35■■□□□ 1.49
SFXN1-207ENST00000507395 KIF7Q2M1P5 1343 aa24.35■■□□□ 1.49
SFXN1-207ENST00000507395 TNNT2P45379 298 aaPredicted RBP24.33■■□□□ 1.49
SFXN1-207ENST00000507395 ZNF827Q17R98 1081 aa24.33■■□□□ 1.49
SFXN1-207ENST00000507395 PCDH11XQ9BZA7 1347 aa24.33■■□□□ 1.48
SFXN1-207ENST00000507395 PCDH11YQ9BZA8 1340 aa24.33■■□□□ 1.48
SFXN1-207ENST00000507395 TOGARAM1Q9Y4F4 1720 aa24.32■■□□□ 1.48
SFXN1-207ENST00000507395 EIF4A2Q14240 407 aaKnown RBP24.32■■□□□ 1.48
SFXN1-207ENST00000507395 SLC27A3Q5K4L6 730 aa24.32■■□□□ 1.48
SFXN1-207ENST00000507395 SYTL4Q96C24 671 aaPredicted RBP24.32■■□□□ 1.48
SFXN1-207ENST00000507395 PTGER2P43116 358 aa24.31■■□□□ 1.48
SFXN1-207ENST00000507395 AKT1S1Q96B36 256 aa24.31■■□□□ 1.48
SFXN1-207ENST00000507395 ZBTB7AO95365 584 aa24.29■■□□□ 1.48
SFXN1-207ENST00000507395 AMER1Q5JTC6 1135 aaPredicted RBP24.29■■□□□ 1.48
SFXN1-207ENST00000507395 QSER1Q2KHR3 1735 aa24.29■■□□□ 1.48
SFXN1-207ENST00000507395 KCNQ4P56696 695 aa24.28■■□□□ 1.48
SFXN1-207ENST00000507395 NKX1-1Q15270 411 aaPredicted RBP24.28■■□□□ 1.48
SFXN1-207ENST00000507395 SGIP1Q9BQI5 828 aa24.28■■□□□ 1.48
SFXN1-207ENST00000507395 PER1O15534 1290 aaPredicted RBP24.27■■□□□ 1.48
SFXN1-207ENST00000507395 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.27■■□□□ 1.48
SFXN1-207ENST00000507395 IGSF1Q8N6C5 1336 aa24.27■■□□□ 1.48
SFXN1-207ENST00000507395 ITGB4P16144 1822 aa24.26■■□□□ 1.47
SFXN1-207ENST00000507395 TUBGCP6Q96RT7 1819 aa24.26■■□□□ 1.47
SFXN1-207ENST00000507395 MORC1Q86VD1 984 aa24.25■■□□□ 1.47
SFXN1-207ENST00000507395 KNSTRNQ9Y448 316 aa24.25■■□□□ 1.47
SFXN1-207ENST00000507395 ATF5Q9Y2D1 282 aaPredicted RBP24.24■■□□□ 1.47
SFXN1-207ENST00000507395 PLEKHG2Q9H7P9 1386 aa24.24■■□□□ 1.47
SFXN1-207ENST00000507395 MTFR1LQ9H019 292 aa24.23■■□□□ 1.47
SFXN1-207ENST00000507395 SPG7Q9UQ90 795 aa24.23■■□□□ 1.47
SFXN1-207ENST00000507395 COL24A1Q17RW2 1714 aa24.22■■□□□ 1.47
SFXN1-207ENST00000507395 PNPLA7Q6ZV29 1317 aa24.21■■□□□ 1.47
SFXN1-207ENST00000507395 PPP1R1BQ9UD71 204 aaPredicted RBP24.21■■□□□ 1.47
SFXN1-207ENST00000507395 CCNL1Q9UK58 526 aaPredicted RBP24.21■■□□□ 1.47
SFXN1-207ENST00000507395 PHKG2P15735 406 aa24.2■■□□□ 1.46
SFXN1-207ENST00000507395 MPRIPQ6WCQ1 1025 aa24.2■■□□□ 1.46
SFXN1-207ENST00000507395 PIGBQ92521 554 aa24.19■■□□□ 1.46
SFXN1-207ENST00000507395 TAF1LQ8IZX4 1826 aa24.18■■□□□ 1.46
SFXN1-207ENST00000507395 C5P01031 1676 aa24.18■■□□□ 1.46
SFXN1-207ENST00000507395 PALLDQ8WX93 1383 aa24.17■■□□□ 1.46
SFXN1-207ENST00000507395 IFNL2Q8IZJ0 200 aa24.17■■□□□ 1.46
SFXN1-207ENST00000507395 IL13P35225 146 aa24.15■■□□□ 1.46
SFXN1-207ENST00000507395 SLC16A10Q8TF71 515 aa24.15■■□□□ 1.46
SFXN1-207ENST00000507395 AEBP1Q8IUX7 1158 aa24.14■■□□□ 1.45
SFXN1-207ENST00000507395 TFCP2L1Q9NZI6 479 aa24.14■■□□□ 1.45
SFXN1-207ENST00000507395 KDRP35968 1356 aa24.14■■□□□ 1.45
SFXN1-207ENST00000507395 SMARCC1Q92922 1105 aaPredicted RBP24.12■■□□□ 1.45
SFXN1-207ENST00000507395 FHDC1Q9C0D6 1143 aaPredicted RBP24.11■■□□□ 1.45
SFXN1-207ENST00000507395 NPC1L1Q9UHC9 1359 aa24.11■■□□□ 1.45
SFXN1-207ENST00000507395 UTRNP46939 3433 aa24.1■■□□□ 1.45
SFXN1-207ENST00000507395 MTHFSP49914 203 aa24.1■■□□□ 1.45
SFXN1-207ENST00000507395 COL23A1Q86Y22 540 aaPredicted RBP24.1■■□□□ 1.45
SFXN1-207ENST00000507395 ARXQ96QS3 562 aa24.1■■□□□ 1.45
SFXN1-207ENST00000507395 SYT17Q9BSW7 474 aa24.1■■□□□ 1.45
SFXN1-207ENST00000507395 C4BP0C0L5 1744 aa24.1■■□□□ 1.45
SFXN1-207ENST00000507395 ASAP1Q9ULH1 1129 aa24.09■■□□□ 1.45
SFXN1-207ENST00000507395 KDM6AO15550 1401 aaPredicted RBP24.09■■□□□ 1.45
SFXN1-207ENST00000507395 MAP3K5Q99683 1374 aa24.08■■□□□ 1.45
SFXN1-207ENST00000507395 PLEKHO1Q53GL0 409 aaPredicted RBP24.08■■□□□ 1.45
SFXN1-207ENST00000507395 SULT6B1Q6IMI4 303 aa24.08■■□□□ 1.45
SFXN1-207ENST00000507395 TMOD3Q9NYL9 352 aa24.08■■□□□ 1.45
SFXN1-207ENST00000507395 AMOTQ4VCS5 1084 aa24.07■■□□□ 1.44
SFXN1-207ENST00000507395 CC2D1BQ5T0F9 858 aaKnown RBP24.07■■□□□ 1.44
SFXN1-207ENST00000507395 AMIGO3Q86WK7 504 aa24.07■■□□□ 1.44
SFXN1-207ENST00000507395 ATG3Q9NT62 314 aa24.07■■□□□ 1.44
SFXN1-207ENST00000507395 DCAF5Q96JK2 942 aa24.06■■□□□ 1.44
SFXN1-207ENST00000507395 UBR3Q6ZT12 1888 aa24.05■■□□□ 1.44
SFXN1-207ENST00000507395 LOC102724428A0A0B4J2F2 783 aa24.05■■□□□ 1.44
SFXN1-207ENST00000507395 ERVV-2B6SEH9 535 aa24.05■■□□□ 1.44
SFXN1-207ENST00000507395 SIK1P57059 783 aa24.05■■□□□ 1.44
SFXN1-207ENST00000507395 ZNF530Q6P9A1 599 aaPredicted RBP24.04■■□□□ 1.44
SFXN1-207ENST00000507395 COL3A1P02461 1466 aaPredicted RBP24.03■■□□□ 1.44
SFXN1-207ENST00000507395 ITPK1Q13572 414 aa24.03■■□□□ 1.44
SFXN1-207ENST00000507395 LINC00116Q8NCU8 138 aa24.03■■□□□ 1.44
SFXN1-207ENST00000507395 ZNF831Q5JPB2 1677 aa24.02■■□□□ 1.44
SFXN1-207ENST00000507395 HSP90AB1P08238 724 aaKnown RBP24.02■■□□□ 1.44
SFXN1-207ENST00000507395 SLC4A9Q96Q91 983 aa24.02■■□□□ 1.44
SFXN1-207ENST00000507395 HMGB2P26583 209 aaKnown RBP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms