RNA–Protein interactions for RNA: ENST00000507282.1

LPCAT1-204, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 2

Gene LPCAT1, Length 417 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-204ENST00000507282 MAP2P11137 1827 aaKnown RBP23.43■■□□□ 1.34
LPCAT1-204ENST00000507282 TATP17735 454 aaPredicted RBP23.42■■□□□ 1.34
LPCAT1-204ENST00000507282 TNNT2P45379 298 aaPredicted RBP23.42■■□□□ 1.34
LPCAT1-204ENST00000507282 NSD2O96028 1365 aa23.41■■□□□ 1.34
LPCAT1-204ENST00000507282 WASHC2AQ641Q2 1341 aa23.41■■□□□ 1.34
LPCAT1-204ENST00000507282 TXNRD1Q16881 649 aa23.41■■□□□ 1.34
LPCAT1-204ENST00000507282 PROM2Q8N271 834 aa23.41■■□□□ 1.34
LPCAT1-204ENST00000507282 POLKQ9UBT6 870 aa23.41■■□□□ 1.34
LPCAT1-204ENST00000507282 KNSTRNQ9Y448 316 aa23.4■■□□□ 1.34
LPCAT1-204ENST00000507282 KIF7Q2M1P5 1343 aa23.38■■□□□ 1.33
LPCAT1-204ENST00000507282 BTAF1O14981 1849 aa23.37■■□□□ 1.33
LPCAT1-204ENST00000507282 SHANK3Q9BYB0 1731 aa23.36■■□□□ 1.33
LPCAT1-204ENST00000507282 MORC1Q86VD1 984 aa23.36■■□□□ 1.33
LPCAT1-204ENST00000507282 SYTL4Q96C24 671 aaPredicted RBP23.36■■□□□ 1.33
LPCAT1-204ENST00000507282 ANO8Q9HCE9 1232 aaPredicted RBP23.36■■□□□ 1.33
LPCAT1-204ENST00000507282 PRIM1P49642 420 aaKnown RBP23.34■■□□□ 1.33
LPCAT1-204ENST00000507282 STK32BQ9NY57 414 aa23.34■■□□□ 1.33
LPCAT1-204ENST00000507282 PCDH11XQ9BZA7 1347 aa23.33■■□□□ 1.33
LPCAT1-204ENST00000507282 PCDH11YQ9BZA8 1340 aa23.33■■□□□ 1.33
LPCAT1-204ENST00000507282 DOT1LQ8TEK3 1739 aa23.33■■□□□ 1.32
LPCAT1-204ENST00000507282 EYA1Q99502 592 aa23.32■■□□□ 1.32
LPCAT1-204ENST00000507282 NCAPD2Q15021 1401 aa23.32■■□□□ 1.32
LPCAT1-204ENST00000507282 EIF4A2Q14240 407 aaKnown RBP23.3■■□□□ 1.32
LPCAT1-204ENST00000507282 SLC15A2Q16348 729 aa23.29■■□□□ 1.32
LPCAT1-204ENST00000507282 SPON1Q9HCB6 807 aa23.29■■□□□ 1.32
LPCAT1-204ENST00000507282 SPG7Q9UQ90 795 aa23.29■■□□□ 1.32
LPCAT1-204ENST00000507282 CYP27B1O15528 508 aa23.27■■□□□ 1.32
LPCAT1-204ENST00000507282 AMER1Q5JTC6 1135 aaPredicted RBP23.27■■□□□ 1.32
LPCAT1-204ENST00000507282 SLC27A3Q5K4L6 730 aa23.27■■□□□ 1.32
LPCAT1-204ENST00000507282 PKD1L3Q7Z443 1732 aa23.26■■□□□ 1.31
LPCAT1-204ENST00000507282 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.25■■□□□ 1.313e-9■■□□□ 13.2
LPCAT1-204ENST00000507282 LRRC4BQ9NT99 713 aa23.24■■□□□ 1.31
LPCAT1-204ENST00000507282 CASZ1Q86V15 1759 aa23.23■■□□□ 1.31
LPCAT1-204ENST00000507282 PPP1R1BQ9UD71 204 aaPredicted RBP23.23■■□□□ 1.31
LPCAT1-204ENST00000507282 PAPPAQ13219 1627 aa23.22■■□□□ 1.31
LPCAT1-204ENST00000507282 PER1O15534 1290 aaPredicted RBP23.22■■□□□ 1.31
LPCAT1-204ENST00000507282 PDGFDQ9GZP0 370 aaPredicted RBP23.22■■□□□ 1.31
LPCAT1-204ENST00000507282 IGSF1Q8N6C5 1336 aa23.22■■□□□ 1.31
LPCAT1-204ENST00000507282 PLEKHG2Q9H7P9 1386 aa23.2■■□□□ 1.3
LPCAT1-204ENST00000507282 ZBTB7AO95365 584 aa23.2■■□□□ 1.3
LPCAT1-204ENST00000507282 NKX1-1Q15270 411 aaPredicted RBP23.2■■□□□ 1.3
LPCAT1-204ENST00000507282 MPRIPQ6WCQ1 1025 aa23.2■■□□□ 1.3
LPCAT1-204ENST00000507282 LY75O60449 1722 aa23.19■■□□□ 1.3
LPCAT1-204ENST00000507282 ZNF827Q17R98 1081 aa23.19■■□□□ 1.3
LPCAT1-204ENST00000507282 CC2D1BQ5T0F9 858 aaKnown RBP23.19■■□□□ 1.3
LPCAT1-204ENST00000507282 IFNL2Q8IZJ0 200 aa23.19■■□□□ 1.3
LPCAT1-204ENST00000507282 CCNL1Q9UK58 526 aaPredicted RBP23.19■■□□□ 1.3
LPCAT1-204ENST00000507282 KCNQ4P56696 695 aa23.18■■□□□ 1.3
LPCAT1-204ENST00000507282 AKT1S1Q96B36 256 aa23.17■■□□□ 1.3
LPCAT1-204ENST00000507282 PHKG2P15735 406 aa23.16■■□□□ 1.3
LPCAT1-204ENST00000507282 ATF5Q9Y2D1 282 aaPredicted RBP23.16■■□□□ 1.3
LPCAT1-204ENST00000507282 TOGARAM1Q9Y4F4 1720 aa23.16■■□□□ 1.3
LPCAT1-204ENST00000507282 HMGB2P26583 209 aaKnown RBP23.15■■□□□ 1.3
LPCAT1-204ENST00000507282 MTHFSP49914 203 aa23.15■■□□□ 1.3
LPCAT1-204ENST00000507282 PLEKHO1Q53GL0 409 aaPredicted RBP23.15■■□□□ 1.3
LPCAT1-204ENST00000507282 SMARCC1Q92922 1105 aaPredicted RBP23.15■■□□□ 1.3
LPCAT1-204ENST00000507282 MTFR1LQ9H019 292 aa23.15■■□□□ 1.3
LPCAT1-204ENST00000507282 ITGB4P16144 1822 aa23.15■■□□□ 1.3
LPCAT1-204ENST00000507282 PALLDQ8WX93 1383 aa23.14■■□□□ 1.3
LPCAT1-204ENST00000507282 TFCP2L1Q9NZI6 479 aa23.14■■□□□ 1.29
LPCAT1-204ENST00000507282 NPC1L1Q9UHC9 1359 aa23.14■■□□□ 1.29
LPCAT1-204ENST00000507282 IL13P35225 146 aa23.13■■□□□ 1.29
LPCAT1-204ENST00000507282 AMOTQ4VCS5 1084 aa23.13■■□□□ 1.29
LPCAT1-204ENST00000507282 PIGBQ92521 554 aa23.13■■□□□ 1.29
LPCAT1-204ENST00000507282 TMOD3Q9NYL9 352 aa23.13■■□□□ 1.29
LPCAT1-204ENST00000507282 CNGB1Q14028 1251 aaPredicted RBP23.12■■□□□ 1.29
LPCAT1-204ENST00000507282 SULT6B1Q6IMI4 303 aa23.12■■□□□ 1.29
LPCAT1-204ENST00000507282 AEBP1Q8IUX7 1158 aa23.12■■□□□ 1.29
LPCAT1-204ENST00000507282 HSP90AB1P08238 724 aaKnown RBP23.11■■□□□ 1.29
LPCAT1-204ENST00000507282 PTGER2P43116 358 aa23.11■■□□□ 1.29
LPCAT1-204ENST00000507282 ZNF530Q6P9A1 599 aaPredicted RBP23.1■■□□□ 1.29
LPCAT1-204ENST00000507282 QSER1Q2KHR3 1735 aa23.1■■□□□ 1.29
LPCAT1-204ENST00000507282 SLC16A10Q8TF71 515 aa23.09■■□□□ 1.29
LPCAT1-204ENST00000507282 PNPLA7Q6ZV29 1317 aa23.08■■□□□ 1.29
LPCAT1-204ENST00000507282 DCAF5Q96JK2 942 aa23.08■■□□□ 1.29
LPCAT1-204ENST00000507282 KDRP35968 1356 aa23.08■■□□□ 1.29
LPCAT1-204ENST00000507282 C1orf141Q5JVX7 400 aa23.07■■□□□ 1.28
LPCAT1-204ENST00000507282 C5P01031 1676 aa23.06■■□□□ 1.28
LPCAT1-204ENST00000507282 DIAPH1O60610 1272 aaKnown RBP23.06■■□□□ 1.28
LPCAT1-204ENST00000507282 ERVV-2B6SEH9 535 aa23.05■■□□□ 1.28
LPCAT1-204ENST00000507282 TUBGCP6Q96RT7 1819 aa23.05■■□□□ 1.28
LPCAT1-204ENST00000507282 SGIP1Q9BQI5 828 aa23.04■■□□□ 1.28
LPCAT1-204ENST00000507282 ASAP1Q9ULH1 1129 aa23.04■■□□□ 1.28
LPCAT1-204ENST00000507282 LOC102724428A0A0B4J2F2 783 aa23.03■■□□□ 1.28
LPCAT1-204ENST00000507282 DCAF8L1A6NGE4 600 aa23.03■■□□□ 1.28
LPCAT1-204ENST00000507282 MSH5O43196 834 aa23.03■■□□□ 1.28
LPCAT1-204ENST00000507282 SIK1P57059 783 aa23.03■■□□□ 1.28
LPCAT1-204ENST00000507282 TAF1LQ8IZX4 1826 aa23.03■■□□□ 1.28
LPCAT1-204ENST00000507282 HMOX1P09601 288 aa23.02■■□□□ 1.28
LPCAT1-204ENST00000507282 ARXQ96QS3 562 aa23.02■■□□□ 1.28
LPCAT1-204ENST00000507282 POLD1P28340 1107 aa23.01■■□□□ 1.27
LPCAT1-204ENST00000507282 CABP4P57796 275 aa23.01■■□□□ 1.27
LPCAT1-204ENST00000507282 FLAD1Q8NFF5 587 aa23.01■■□□□ 1.27
LPCAT1-204ENST00000507282 ATG3Q9NT62 314 aa23.01■■□□□ 1.27
LPCAT1-204ENST00000507282 KDM6AO15550 1401 aaPredicted RBP23■■□□□ 1.27
LPCAT1-204ENST00000507282 COL23A1Q86Y22 540 aaPredicted RBP23■■□□□ 1.27
LPCAT1-204ENST00000507282 AK7Q96M32 723 aa23■■□□□ 1.27
LPCAT1-204ENST00000507282 C4BP0C0L5 1744 aa22.99■■□□□ 1.27
LPCAT1-204ENST00000507282 ATP6V1AP38606 617 aa22.99■■□□□ 1.27
LPCAT1-204ENST00000507282 FHDC1Q9C0D6 1143 aaPredicted RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms