RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 BRD4O60885 1362 aaPredicted RBP8.28□□□□□ -1.08
GYPB-208ENST00000507009 GPR162Q16538 588 aa8.28□□□□□ -1.08
GYPB-208ENST00000507009 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.28□□□□□ -1.08
GYPB-208ENST00000507009 KCNH5Q8NCM2 988 aa8.28□□□□□ -1.08
GYPB-208ENST00000507009 MS4A3Q96HJ5 214 aa8.28□□□□□ -1.08
GYPB-208ENST00000507009 ARXQ96QS3 562 aa8.28□□□□□ -1.08
GYPB-208ENST00000507009 CDCA7Q9BWT1 371 aaPredicted RBP8.28□□□□□ -1.08
GYPB-208ENST00000507009 CARD10Q9BWT7 1032 aa8.28□□□□□ -1.08
GYPB-208ENST00000507009 MTFR1LQ9H019 292 aa8.28□□□□□ -1.08
GYPB-208ENST00000507009 NLRP2Q9NX02 1062 aa8.28□□□□□ -1.08
GYPB-208ENST00000507009 ARHGEF25Q86VW2 580 aa8.27□□□□□ -1.09
GYPB-208ENST00000507009 TRPM1Q7Z4N2 1603 aa8.27□□□□□ -1.09
GYPB-208ENST00000507009 NHSQ6T4R5 1651 aa8.27□□□□□ -1.09
GYPB-208ENST00000507009 CHD4Q14839 1912 aa8.27□□□□□ -1.09
GYPB-208ENST00000507009 KTN1Q86UP2 1357 aaKnown RBP8.26□□□□□ -1.09
GYPB-208ENST00000507009 PLCD3Q8N3E9 789 aa8.26□□□□□ -1.09
GYPB-208ENST00000507009 TNS2Q63HR2 1409 aa8.26□□□□□ -1.09
GYPB-208ENST00000507009 BTAF1O14981 1849 aa8.26□□□□□ -1.09
GYPB-208ENST00000507009 CCDC7Q96M83 1385 aa8.25□□□□□ -1.09
GYPB-208ENST00000507009 C1QTNF8P60827 252 aa8.25□□□□□ -1.09
GYPB-208ENST00000507009 NEUROD1Q13562 356 aa8.25□□□□□ -1.09
GYPB-208ENST00000507009 ZNF827Q17R98 1081 aa8.25□□□□□ -1.09
GYPB-208ENST00000507009 LTN1O94822 1766 aa8.25□□□□□ -1.09
GYPB-208ENST00000507009 NFAT5O94916 1531 aa8.24□□□□□ -1.09
GYPB-208ENST00000507009 IL2RBP14784 551 aa8.24□□□□□ -1.09
GYPB-208ENST00000507009 KCNQ4P56696 695 aa8.24□□□□□ -1.09
GYPB-208ENST00000507009 DDX54Q8TDD1 881 aaKnown RBP8.24□□□□□ -1.09
GYPB-208ENST00000507009 TMC1Q8TDI8 760 aa8.24□□□□□ -1.09
GYPB-208ENST00000507009 ANKRD24Q8TF21 1146 aa8.24□□□□□ -1.09
GYPB-208ENST00000507009 L3MBTL2Q969R5 705 aa8.24□□□□□ -1.09
GYPB-208ENST00000507009 SYTL4Q96C24 671 aaPredicted RBP8.24□□□□□ -1.09
GYPB-208ENST00000507009 LTV1Q96GA3 475 aaPredicted RBP8.24□□□□□ -1.09
GYPB-208ENST00000507009 TTC21AQ8NDW8 1320 aa8.24□□□□□ -1.09
GYPB-208ENST00000507009 ROCK2O75116 1388 aaKnown RBP8.23□□□□□ -1.09
GYPB-208ENST00000507009 BCL9O00512 1426 aa8.23□□□□□ -1.09
GYPB-208ENST00000507009 GIGYF1O75420 1035 aaPredicted RBP8.23□□□□□ -1.09
GYPB-208ENST00000507009 NME9Q86XW9 330 aa8.23□□□□□ -1.09
GYPB-208ENST00000507009 SGIP1Q9BQI5 828 aa8.23□□□□□ -1.09
GYPB-208ENST00000507009 LRRC4BQ9NT99 713 aa8.23□□□□□ -1.09
GYPB-208ENST00000507009 ABCC6O95255 1503 aa8.23□□□□□ -1.09
GYPB-208ENST00000507009 PAPPAQ13219 1627 aa8.22□□□□□ -1.09
GYPB-208ENST00000507009 POLD1P28340 1107 aa8.22□□□□□ -1.09
GYPB-208ENST00000507009 RASEFQ8IZ41 740 aa8.22□□□□□ -1.09
GYPB-208ENST00000507009 SIN3AQ96ST3 1273 aa8.22□□□□□ -1.09
GYPB-208ENST00000507009 TFCP2L1Q9NZI6 479 aa8.22□□□□□ -1.09
GYPB-208ENST00000507009 MON2Q7Z3U7 1717 aa8.22□□□□□ -1.09
GYPB-208ENST00000507009 ERBB3P21860 1342 aa8.22□□□□□ -1.09
GYPB-208ENST00000507009 NLGN2Q8NFZ4 835 aa8.21□□□□□ -1.1
GYPB-208ENST00000507009 TUBGCP6Q96RT7 1819 aa8.21□□□□□ -1.1
GYPB-208ENST00000507009 DOT1LQ8TEK3 1739 aa8.2□□□□□ -1.1
GYPB-208ENST00000507009 MSL1Q68DK7 614 aa8.2□□□□□ -1.1
GYPB-208ENST00000507009 ASTLQ6HA08 431 aaPredicted RBP8.2□□□□□ -1.1
GYPB-208ENST00000507009 HDGFL2Q7Z4V5 671 aaPredicted RBP8.2□□□□□ -1.1
GYPB-208ENST00000507009 KIF12Q96FN5 646 aa8.2□□□□□ -1.1
GYPB-208ENST00000507009 POTEB2H3BUK9 544 aa8.19□□□□□ -1.1
GYPB-208ENST00000507009 ATMINO43313 823 aaPredicted RBP8.19□□□□□ -1.1
GYPB-208ENST00000507009 PRIM1P49642 420 aaKnown RBP8.19□□□□□ -1.1
GYPB-208ENST00000507009 SLC12A5Q9H2X9 1139 aa8.19□□□□□ -1.1
GYPB-208ENST00000507009 WWC3Q9ULE0 1092 aa8.19□□□□□ -1.1
GYPB-208ENST00000507009 PNPLA7Q6ZV29 1317 aa8.19□□□□□ -1.1
GYPB-208ENST00000507009 SLC27A3Q5K4L6 730 aa8.18□□□□□ -1.1
GYPB-208ENST00000507009 ZNF526Q8TF50 670 aaPredicted RBP8.18□□□□□ -1.1
GYPB-208ENST00000507009 ZBTB47Q9UFB7 747 aaPredicted RBP8.18□□□□□ -1.1
GYPB-208ENST00000507009 UTRNP46939 3433 aa8.18□□□□□ -1.1
GYPB-208ENST00000507009 MAP3K5Q99683 1374 aa8.18□□□□□ -1.1
GYPB-208ENST00000507009 QSER1Q2KHR3 1735 aa8.17□□□□□ -1.1
GYPB-208ENST00000507009 RGPD2P0DJD1 1756 aa8.17□□□□□ -1.1
GYPB-208ENST00000507009 MAP3K13O43283 966 aa8.17□□□□□ -1.1
GYPB-208ENST00000507009 AMPHP49418 695 aa8.17□□□□□ -1.1
GYPB-208ENST00000507009 SLC16A10Q8TF71 515 aa8.17□□□□□ -1.1
GYPB-208ENST00000507009 CARD11Q9BXL7 1154 aa8.17□□□□□ -1.1
GYPB-208ENST00000507009 CCNL1Q9UK58 526 aaPredicted RBP8.17□□□□□ -1.1
GYPB-208ENST00000507009 USP31Q70CQ4 1352 aa8.17□□□□□ -1.1
GYPB-208ENST00000507009 SBNO2Q9Y2G9 1366 aa8.17□□□□□ -1.1
GYPB-208ENST00000507009 SHANK3Q9BYB0 1731 aa8.17□□□□□ -1.1
GYPB-208ENST00000507009 YBX3P16989 372 aaKnown RBP eCLIP8.16□□□□□ -1.16e-7■■■□□ 14.8
GYPB-208ENST00000507009 FBLN1P23142 703 aa8.16□□□□□ -1.1
GYPB-208ENST00000507009 EDC4Q6P2E9 1401 aaKnown RBP8.16□□□□□ -1.1
GYPB-208ENST00000507009 USP54Q70EL1 1684 aa8.16□□□□□ -1.1
GYPB-208ENST00000507009 USHBP1Q8N6Y0 703 aa8.16□□□□□ -1.1
GYPB-208ENST00000507009 CD163L1Q9NR16 1453 aa8.16□□□□□ -1.1
GYPB-208ENST00000507009 TERF2IPQ9NYB0 399 aa8.16□□□□□ -1.1
GYPB-208ENST00000507009 METRNQ9UJH8 293 aa8.16□□□□□ -1.1
GYPB-208ENST00000507009 FAM208AQ9UK61 1670 aaKnown RBP8.16□□□□□ -1.1
GYPB-208ENST00000507009 A0A1W2PP64 1363 aa8.15□□□□□ -1.1
GYPB-208ENST00000507009 NUBP1P53384 320 aa8.15□□□□□ -1.1
GYPB-208ENST00000507009 ATN1P54259 1190 aaPredicted RBP8.15□□□□□ -1.1
GYPB-208ENST00000507009 IFFO2Q5TF58 517 aa8.15□□□□□ -1.1
GYPB-208ENST00000507009 COL23A1Q86Y22 540 aaPredicted RBP8.15□□□□□ -1.1
GYPB-208ENST00000507009 ZCRB1Q8TBF4 217 aaKnown RBP8.15□□□□□ -1.1
GYPB-208ENST00000507009 SLC39A7Q92504 469 aa8.15□□□□□ -1.1
GYPB-208ENST00000507009 IP6K1Q92551 441 aa8.15□□□□□ -1.1
GYPB-208ENST00000507009 TRPC6Q9Y210 931 aa8.15□□□□□ -1.1
GYPB-208ENST00000507009 LY75O60449 1722 aa8.15□□□□□ -1.11
GYPB-208ENST00000507009 ATP10DQ9P241 1426 aa8.14□□□□□ -1.11
GYPB-208ENST00000507009 ANKRD36BQ8N2N9 1353 aa8.14□□□□□ -1.11
GYPB-208ENST00000507009 USP47Q96K76 1375 aa8.14□□□□□ -1.11
GYPB-208ENST00000507009 MAP3K19Q56UN5 1328 aa8.14□□□□□ -1.11
GYPB-208ENST00000507009 GRIN3BO60391 1043 aa8.14□□□□□ -1.11
GYPB-208ENST00000507009 HOXC9P31274 260 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms