RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 DCAF8L1A6NGE4 600 aa19.9■□□□□ 0.78
HMGCS1-203ENST00000507004 HSP90AB2PQ58FF8 381 aa19.89■□□□□ 0.77
HMGCS1-203ENST00000507004 BTAF1O14981 1849 aa19.88■□□□□ 0.77
HMGCS1-203ENST00000507004 MEGF6O75095 1541 aa19.87■□□□□ 0.77
HMGCS1-203ENST00000507004 PCDH11XQ9BZA7 1347 aa19.87■□□□□ 0.77
HMGCS1-203ENST00000507004 PCDH11YQ9BZA8 1340 aa19.87■□□□□ 0.77
HMGCS1-203ENST00000507004 CASZ1Q86V15 1759 aa19.86■□□□□ 0.77
HMGCS1-203ENST00000507004 WASHC2AQ641Q2 1341 aa19.86■□□□□ 0.77
HMGCS1-203ENST00000507004 HSPA5P11021 654 aaKnown RBP19.86■□□□□ 0.77
HMGCS1-203ENST00000507004 POLR3GLQ9BT43 218 aa19.86■□□□□ 0.77
HMGCS1-203ENST00000507004 MTFR1LQ9H019 292 aa19.86■□□□□ 0.77
HMGCS1-203ENST00000507004 NSD2O96028 1365 aa19.85■□□□□ 0.77
HMGCS1-203ENST00000507004 PRIM1P49642 420 aaKnown RBP19.85■□□□□ 0.77
HMGCS1-203ENST00000507004 SYTL4Q96C24 671 aaPredicted RBP19.85■□□□□ 0.77
HMGCS1-203ENST00000507004 EMILIN1Q9Y6C2 1016 aa19.84■□□□□ 0.77
HMGCS1-203ENST00000507004 RGPD2P0DJD1 1756 aa19.84■□□□□ 0.77
HMGCS1-203ENST00000507004 PLEKHG2Q9H7P9 1386 aa19.83■□□□□ 0.77
HMGCS1-203ENST00000507004 SLC16A10Q8TF71 515 aa19.83■□□□□ 0.77
HMGCS1-203ENST00000507004 PPM1GO15355 546 aaPredicted RBP19.82■□□□□ 0.76
HMGCS1-203ENST00000507004 USHBP1Q8N6Y0 703 aa19.82■□□□□ 0.76
HMGCS1-203ENST00000507004 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.82■□□□□ 0.763e-15■□□□□ 9.2
HMGCS1-203ENST00000507004 PAPPAQ13219 1627 aa19.82■□□□□ 0.76
HMGCS1-203ENST00000507004 NCAPD2Q15021 1401 aa19.82■□□□□ 0.76
HMGCS1-203ENST00000507004 ANKRD26Q9UPS8 1709 aa19.82■□□□□ 0.76
HMGCS1-203ENST00000507004 ZBTB7AO95365 584 aa19.81■□□□□ 0.76
HMGCS1-203ENST00000507004 SPG7Q9UQ90 795 aa19.81■□□□□ 0.76
HMGCS1-203ENST00000507004 SHANK3Q9BYB0 1731 aa19.8■□□□□ 0.76
HMGCS1-203ENST00000507004 POLKQ9UBT6 870 aa19.8■□□□□ 0.76
HMGCS1-203ENST00000507004 DOT1LQ8TEK3 1739 aa19.79■□□□□ 0.76
HMGCS1-203ENST00000507004 AKT1S1Q96B36 256 aa19.79■□□□□ 0.76
HMGCS1-203ENST00000507004 PANK3Q9H999 370 aa19.79■□□□□ 0.76
HMGCS1-203ENST00000507004 LRRC4BQ9NT99 713 aa19.79■□□□□ 0.76
HMGCS1-203ENST00000507004 PTGER2P43116 358 aa19.78■□□□□ 0.76
HMGCS1-203ENST00000507004 MAP2P11137 1827 aaKnown RBP19.78■□□□□ 0.76
HMGCS1-203ENST00000507004 SMARCC1Q92922 1105 aaPredicted RBP19.77■□□□□ 0.76
HMGCS1-203ENST00000507004 PDGFDQ9GZP0 370 aaPredicted RBP19.77■□□□□ 0.76
HMGCS1-203ENST00000507004 CCNL1Q9UK58 526 aaPredicted RBP19.77■□□□□ 0.76
HMGCS1-203ENST00000507004 ATF5Q9Y2D1 282 aaPredicted RBP19.77■□□□□ 0.76
HMGCS1-203ENST00000507004 LY75O60449 1722 aa19.76■□□□□ 0.75
HMGCS1-203ENST00000507004 NKX1-1Q15270 411 aaPredicted RBP19.75■□□□□ 0.75
HMGCS1-203ENST00000507004 ZNF827Q17R98 1081 aa19.75■□□□□ 0.75
HMGCS1-203ENST00000507004 EYA1Q99502 592 aa19.75■□□□□ 0.75
HMGCS1-203ENST00000507004 TFCP2L1Q9NZI6 479 aa19.75■□□□□ 0.75
HMGCS1-203ENST00000507004 KNSTRNQ9Y448 316 aa19.75■□□□□ 0.75
HMGCS1-203ENST00000507004 QSER1Q2KHR3 1735 aa19.75■□□□□ 0.75
HMGCS1-203ENST00000507004 PKD1L3Q7Z443 1732 aa19.74■□□□□ 0.75
HMGCS1-203ENST00000507004 CYP27B1O15528 508 aa19.74■□□□□ 0.75
HMGCS1-203ENST00000507004 SGIP1Q9BQI5 828 aa19.74■□□□□ 0.75
HMGCS1-203ENST00000507004 POLD1P28340 1107 aa19.73■□□□□ 0.75
HMGCS1-203ENST00000507004 ARXQ96QS3 562 aa19.73■□□□□ 0.75
HMGCS1-203ENST00000507004 MAP3K5Q99683 1374 aa19.72■□□□□ 0.75
HMGCS1-203ENST00000507004 MORC1Q86VD1 984 aa19.72■□□□□ 0.75
HMGCS1-203ENST00000507004 IFNL2Q8IZJ0 200 aa19.72■□□□□ 0.75
HMGCS1-203ENST00000507004 FLAD1Q8NFF5 587 aa19.72■□□□□ 0.75
HMGCS1-203ENST00000507004 TNNT2P45379 298 aaPredicted RBP19.71■□□□□ 0.75
HMGCS1-203ENST00000507004 EIF4A2Q14240 407 aaKnown RBP19.71■□□□□ 0.75
HMGCS1-203ENST00000507004 MPRIPQ6WCQ1 1025 aa19.71■□□□□ 0.75
HMGCS1-203ENST00000507004 PALLDQ8WX93 1383 aa19.7■□□□□ 0.74
HMGCS1-203ENST00000507004 HSP90AB1P08238 724 aaKnown RBP19.7■□□□□ 0.74
HMGCS1-203ENST00000507004 SYT17Q9BSW7 474 aa19.7■□□□□ 0.74
HMGCS1-203ENST00000507004 PNPLA7Q6ZV29 1317 aa19.7■□□□□ 0.74
HMGCS1-203ENST00000507004 IGSF1Q8N6C5 1336 aa19.7■□□□□ 0.74
HMGCS1-203ENST00000507004 FHDC1Q9C0D6 1143 aaPredicted RBP19.69■□□□□ 0.74
HMGCS1-203ENST00000507004 PHKG2P15735 406 aa19.67■□□□□ 0.74
HMGCS1-203ENST00000507004 AMOTQ4VCS5 1084 aa19.67■□□□□ 0.74
HMGCS1-203ENST00000507004 TMOD3Q9NYL9 352 aa19.67■□□□□ 0.74
HMGCS1-203ENST00000507004 PLEKHO1Q53GL0 409 aaPredicted RBP19.66■□□□□ 0.74
HMGCS1-203ENST00000507004 YY1P25490 414 aa19.65■□□□□ 0.74
HMGCS1-203ENST00000507004 PIGBQ92521 554 aa19.65■□□□□ 0.74
HMGCS1-203ENST00000507004 KCNQ4P56696 695 aa19.64■□□□□ 0.73
HMGCS1-203ENST00000507004 KIF7Q2M1P5 1343 aa19.64■□□□□ 0.73
HMGCS1-203ENST00000507004 ITGB4P16144 1822 aa19.63■□□□□ 0.73
HMGCS1-203ENST00000507004 COL24A1Q17RW2 1714 aa19.63■□□□□ 0.73
HMGCS1-203ENST00000507004 ERVV-2B6SEH9 535 aa19.63■□□□□ 0.73
HMGCS1-203ENST00000507004 MSH5O43196 834 aa19.62■□□□□ 0.73
HMGCS1-203ENST00000507004 AMER1Q5JTC6 1135 aaPredicted RBP19.62■□□□□ 0.73
HMGCS1-203ENST00000507004 DCAF5Q96JK2 942 aa19.62■□□□□ 0.73
HMGCS1-203ENST00000507004 AK7Q96M32 723 aa19.62■□□□□ 0.73
HMGCS1-203ENST00000507004 TOGARAM1Q9Y4F4 1720 aa19.62■□□□□ 0.73
HMGCS1-203ENST00000507004 C5P01031 1676 aa19.62■□□□□ 0.73
HMGCS1-203ENST00000507004 LOC102724428A0A0B4J2F2 783 aa19.61■□□□□ 0.73
HMGCS1-203ENST00000507004 SIK1P57059 783 aa19.61■□□□□ 0.73
HMGCS1-203ENST00000507004 COL23A1Q86Y22 540 aaPredicted RBP19.61■□□□□ 0.73
HMGCS1-203ENST00000507004 C1orf141Q5JVX7 400 aa19.59■□□□□ 0.73
HMGCS1-203ENST00000507004 TUBGCP6Q96RT7 1819 aa19.59■□□□□ 0.73
HMGCS1-203ENST00000507004 TAF1LQ8IZX4 1826 aa19.58■□□□□ 0.73
HMGCS1-203ENST00000507004 SSFA2P28290 1259 aa19.58■□□□□ 0.72
HMGCS1-203ENST00000507004 KDRP35968 1356 aa19.57■□□□□ 0.72
HMGCS1-203ENST00000507004 NPC1L1Q9UHC9 1359 aa19.57■□□□□ 0.72
HMGCS1-203ENST00000507004 ZNF530Q6P9A1 599 aaPredicted RBP19.57■□□□□ 0.72
HMGCS1-203ENST00000507004 C4BP0C0L5 1744 aa19.56■□□□□ 0.72
HMGCS1-203ENST00000507004 PER1O15534 1290 aaPredicted RBP19.56■□□□□ 0.72
HMGCS1-203ENST00000507004 IL13P35225 146 aa19.56■□□□□ 0.72
HMGCS1-203ENST00000507004 SULT6B1Q6IMI4 303 aa19.56■□□□□ 0.72
HMGCS1-203ENST00000507004 ATP6V1AP38606 617 aa19.55■□□□□ 0.72
HMGCS1-203ENST00000507004 MTHFSP49914 203 aa19.55■□□□□ 0.72
HMGCS1-203ENST00000507004 ATG3Q9NT62 314 aa19.55■□□□□ 0.72
HMGCS1-203ENST00000507004 ASAP1Q9ULH1 1129 aa19.55■□□□□ 0.72
HMGCS1-203ENST00000507004 CABP4P57796 275 aa19.54■□□□□ 0.72
HMGCS1-203ENST00000507004 KLHL34Q8N239 644 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms