RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 DOLKQ9UPQ8 538 aa7.16□□□□□ -1.26
CDC42SE2-210ENST00000506929 ERVK-9P63128 1117 aa7.15□□□□□ -1.26
CDC42SE2-210ENST00000506929 RELBQ01201 579 aa7.15□□□□□ -1.26
CDC42SE2-210ENST00000506929 Q6ZVU0 165 aa7.15□□□□□ -1.26
CDC42SE2-210ENST00000506929 PURBQ96QR8 312 aaKnown RBP7.15□□□□□ -1.26
CDC42SE2-210ENST00000506929 TSEN34Q9BSV6 310 aaKnown RBP7.15□□□□□ -1.26
CDC42SE2-210ENST00000506929 SOBPA7XYQ1 873 aa7.14□□□□□ -1.27
CDC42SE2-210ENST00000506929 RNF20Q5VTR2 975 aa7.14□□□□□ -1.27
CDC42SE2-210ENST00000506929 CCDC125Q86Z20 511 aa7.14□□□□□ -1.27
CDC42SE2-210ENST00000506929 TRIM52Q96A61 297 aa7.14□□□□□ -1.27
CDC42SE2-210ENST00000506929 PALM3A6NDB9 673 aaPredicted RBP7.13□□□□□ -1.27
CDC42SE2-210ENST00000506929 USP17L5A8MUK1 530 aa7.13□□□□□ -1.27
CDC42SE2-210ENST00000506929 BMP2P12643 396 aa7.13□□□□□ -1.27
CDC42SE2-210ENST00000506929 NCOA4Q13772 614 aa7.13□□□□□ -1.27
CDC42SE2-210ENST00000506929 CC2D2BQ6DHV5 1058 aa7.13□□□□□ -1.27
CDC42SE2-210ENST00000506929 LINC00528Q8N1L1 170 aa7.13□□□□□ -1.27
CDC42SE2-210ENST00000506929 CDCA8Q53HL2 280 aa7.12□□□□□ -1.27
CDC42SE2-210ENST00000506929 CFAP70Q5T0N1 1121 aa7.12□□□□□ -1.27
CDC42SE2-210ENST00000506929 PPP1R12CQ9BZL4 782 aa7.12□□□□□ -1.27
CDC42SE2-210ENST00000506929 RAB6BQ9NRW1 208 aa7.12□□□□□ -1.27
CDC42SE2-210ENST00000506929 ATP9BO43861 1147 aa7.11□□□□□ -1.27
CDC42SE2-210ENST00000506929 ADH1AP07327 375 aa7.11□□□□□ -1.27
CDC42SE2-210ENST00000506929 RFX1P22670 979 aa7.11□□□□□ -1.27
CDC42SE2-210ENST00000506929 CTSOP43234 321 aaPredicted RBP7.11□□□□□ -1.27
CDC42SE2-210ENST00000506929 INSM2Q96T92 566 aaPredicted RBP7.11□□□□□ -1.27
CDC42SE2-210ENST00000506929 MAFBQ9Y5Q3 323 aaPredicted RBP7.11□□□□□ -1.27
CDC42SE2-210ENST00000506929 USP17L3A6NCW0 530 aa7.1□□□□□ -1.27
CDC42SE2-210ENST00000506929 USP17L4A6NCW7 530 aa7.1□□□□□ -1.27
CDC42SE2-210ENST00000506929 MAN1A2O60476 641 aa7.1□□□□□ -1.27
CDC42SE2-210ENST00000506929 PTGIRP43119 386 aa7.1□□□□□ -1.27
CDC42SE2-210ENST00000506929 USP17L2Q6R6M4 530 aa7.1□□□□□ -1.27
CDC42SE2-210ENST00000506929 TREML4Q6UXN2 200 aa7.1□□□□□ -1.27
CDC42SE2-210ENST00000506929 USP17L1Q7RTZ2 530 aa7.1□□□□□ -1.27
CDC42SE2-210ENST00000506929 CCDC82Q8N4S0 544 aa7.1□□□□□ -1.27
CDC42SE2-210ENST00000506929 KIAA1024Q9UPX6 916 aa7.1□□□□□ -1.27
CDC42SE2-210ENST00000506929 A0A1W2PRU2 124 aa7.09□□□□□ -1.27
CDC42SE2-210ENST00000506929 FIGNL2A6NMB9 653 aa7.09□□□□□ -1.27
CDC42SE2-210ENST00000506929 TERTO14746 1132 aaKnown RBP7.09□□□□□ -1.27
CDC42SE2-210ENST00000506929 LMOD1P29536 600 aaPredicted RBP7.09□□□□□ -1.27
CDC42SE2-210ENST00000506929 NFATC2IPQ8NCF5 419 aa7.09□□□□□ -1.27
CDC42SE2-210ENST00000506929 ARHGEF10LQ9HCE6 1279 aa7.09□□□□□ -1.27
CDC42SE2-210ENST00000506929 PCDHGA11Q9Y5H2 935 aa7.09□□□□□ -1.27
CDC42SE2-210ENST00000506929 ATP5J2-PTCD1G3V325 749 aa7.08□□□□□ -1.28
CDC42SE2-210ENST00000506929 SPINT1O43278 529 aa7.08□□□□□ -1.28
CDC42SE2-210ENST00000506929 WFS1O76024 890 aa7.08□□□□□ -1.28
CDC42SE2-210ENST00000506929 CLDN10P78369 228 aa7.08□□□□□ -1.28
CDC42SE2-210ENST00000506929 MAP7D1Q3KQU3 841 aa7.08□□□□□ -1.28
CDC42SE2-210ENST00000506929 NXF1Q9UBU9 619 aaKnown RBP7.08□□□□□ -1.28
CDC42SE2-210ENST00000506929 SOS2Q07890 1332 aaPredicted RBP7.07□□□□□ -1.28
CDC42SE2-210ENST00000506929 TTLL8A6PVC2 850 aa7.07□□□□□ -1.28
CDC42SE2-210ENST00000506929 MEN1O00255 615 aa7.07□□□□□ -1.28
CDC42SE2-210ENST00000506929 ZBTB7BO15156 539 aaPredicted RBP7.07□□□□□ -1.28
CDC42SE2-210ENST00000506929 IL2RAP01589 272 aa7.07□□□□□ -1.28
CDC42SE2-210ENST00000506929 SCNN1DP51172 638 aa7.07□□□□□ -1.28
CDC42SE2-210ENST00000506929 NFX1Q12986 1120 aaKnown RBP7.07□□□□□ -1.28
CDC42SE2-210ENST00000506929 USP4Q13107 963 aa7.07□□□□□ -1.28
CDC42SE2-210ENST00000506929 EML3Q32P44 896 aa7.07□□□□□ -1.28
CDC42SE2-210ENST00000506929 KANK4Q5T7N3 995 aaPredicted RBP7.07□□□□□ -1.28
CDC42SE2-210ENST00000506929 FOXD4L5Q5VV16 416 aaPredicted RBP7.07□□□□□ -1.28
CDC42SE2-210ENST00000506929 NPAS3Q8IXF0 933 aa7.07□□□□□ -1.28
CDC42SE2-210ENST00000506929 ETNK1Q9HBU6 452 aa7.07□□□□□ -1.28
CDC42SE2-210ENST00000506929 MKRN1Q9UHC7 482 aaKnown RBP7.07□□□□□ -1.28
CDC42SE2-210ENST00000506929 LGR5O75473 907 aa7.06□□□□□ -1.28
CDC42SE2-210ENST00000506929 MYCP01106 439 aaPredicted RBP7.06□□□□□ -1.28
CDC42SE2-210ENST00000506929 GTF2IP78347 998 aa7.06□□□□□ -1.28
CDC42SE2-210ENST00000506929 LCE2AQ5TA79 106 aaPredicted RBP7.06□□□□□ -1.28
CDC42SE2-210ENST00000506929 PLEKHM2Q8IWE5 1019 aa7.06□□□□□ -1.28
CDC42SE2-210ENST00000506929 SLC16A10Q8TF71 515 aa7.06□□□□□ -1.28
CDC42SE2-210ENST00000506929 ARID3AQ99856 593 aa7.06□□□□□ -1.28
CDC42SE2-210ENST00000506929 DNMT3LQ9UJW3 386 aa7.06□□□□□ -1.28
CDC42SE2-210ENST00000506929 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.05□□□□□ -1.28
CDC42SE2-210ENST00000506929 TMEM229AB2RXF0 380 aa7.05□□□□□ -1.28
CDC42SE2-210ENST00000506929 POLMQ9NP87 494 aaPredicted RBP7.05□□□□□ -1.28
CDC42SE2-210ENST00000506929 SERTAD1Q9UHV2 236 aa7.05□□□□□ -1.28
CDC42SE2-210ENST00000506929 DKK1O94907 266 aa7.04□□□□□ -1.28
CDC42SE2-210ENST00000506929 SRPK2P78362 688 aaKnown RBP7.04□□□□□ -1.28
CDC42SE2-210ENST00000506929 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.04□□□□□ -1.28
CDC42SE2-210ENST00000506929 CRTC2Q53ET0 693 aaPredicted RBP7.04□□□□□ -1.28
CDC42SE2-210ENST00000506929 CYP2U1Q7Z449 544 aa7.04□□□□□ -1.28
CDC42SE2-210ENST00000506929 OGFOD1Q8N543 542 aa7.04□□□□□ -1.28
CDC42SE2-210ENST00000506929 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.04□□□□□ -1.28
CDC42SE2-210ENST00000506929 GAS2L2Q8NHY3 880 aa7.04□□□□□ -1.28
CDC42SE2-210ENST00000506929 ZNF594Q96JF6 807 aaPredicted RBP7.04□□□□□ -1.28
CDC42SE2-210ENST00000506929 ESF1Q9H501 851 aaKnown RBP7.04□□□□□ -1.28
CDC42SE2-210ENST00000506929 NOD1Q9Y239 953 aa7.04□□□□□ -1.28
CDC42SE2-210ENST00000506929 GDF10P55107 478 aa7.03□□□□□ -1.28
CDC42SE2-210ENST00000506929 RNF217Q8TC41 542 aa7.03□□□□□ -1.28
CDC42SE2-210ENST00000506929 CNKSR1Q969H4 720 aa7.03□□□□□ -1.28
CDC42SE2-210ENST00000506929 HRH3Q9Y5N1 445 aa7.03□□□□□ -1.28
CDC42SE2-210ENST00000506929 USP3Q9Y6I4 520 aa7.03□□□□□ -1.28
CDC42SE2-210ENST00000506929 SFI1A8K8P3 1242 aa7.02□□□□□ -1.29
CDC42SE2-210ENST00000506929 H3BM21 787 aa7.02□□□□□ -1.29
CDC42SE2-210ENST00000506929 GNRH1P01148 92 aa7.02□□□□□ -1.29
CDC42SE2-210ENST00000506929 RHOQP17081 205 aa7.02□□□□□ -1.29
CDC42SE2-210ENST00000506929 CENPCQ03188 943 aa7.02□□□□□ -1.29
CDC42SE2-210ENST00000506929 CLN3Q13286 438 aa7.02□□□□□ -1.29
CDC42SE2-210ENST00000506929 PRICKLE2Q7Z3G6 844 aa7.02□□□□□ -1.29
CDC42SE2-210ENST00000506929 CCDC97Q96F63 343 aaPredicted RBP7.02□□□□□ -1.29
CDC42SE2-210ENST00000506929 XAGE2Q96GT9 111 aa7.02□□□□□ -1.29
CDC42SE2-210ENST00000506929 RASA1P20936 1047 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms